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The map label for this gene is 222525901

Identifier: 222525901

GI number: 222525901

Start: 3285922

End: 3287658

Strand: Reverse

Name: 222525901

Synonym: Chy400_2654

Alternate gene names: NA

Gene position: 3287658-3285922 (Counterclockwise)

Preceding gene: 222525902

Following gene: 222525885

Centisome position: 62.4

GC content: 40.99

Gene sequence:

>1737_bases
ATGATCAATACCAATGCCTGGGATGTATTTATATCATACGCTAGCGAAGATAGAGAAACGGTTGCAGCGCCACTCGCTGA
GGCATTACGCGTTAATGGATTGCGAGTTTGGTACGACCAGTTTGAACTCACTCCAGGGAAGCAATTATTACAATCCATTG
ACGAAGGGTTGCGAGAGTCGCGATTTGGAATAGTTGTATTATCACCCCATTTTTTCGCAAAAGAATGGCCTCTGCGTGAA
CTGGCAGGACTGTATACACGATCTATCCAGGAAGGTCAAAAACCTTTTATTATACCAATATGGTATCAACTCAATGTATC
TGAAATAGCAAGATACTCTCCGCTCCTTAGCAATATCATCGCAATCCCATGGGACAGTGGCATTGAAATCGTTGTTCAAA
AGATACTTTCCGTAATCAATGCAGGCCGTGTTGCAAATCCAGATCAACAATACATCAGAGTATTATCAGAGGTTTACAAT
ACCCTTCACCACGAAGATATTGATGAAGAAATAAAACGTATACTTGCAATGTATCCTCTCCATCTTATCCAGCAAGCACT
TGAGGCACTTTTACGTAAAAACGATTTACGATCTACAGTTCGTGCGAAAGCGTTTTCAATACTATGCAAACATCAAATCA
GCAGAACCGAAATCATTAATGAAATATTGGCAAGTACAAACACATCCTTACTCAAAGAAATTATCACCATCCTATCGAGC
ACTAACATAATGCTGTCGAAAGAGCAAATTCACATTCTTCTGAGCAATCCCCACCTTCCTCGCTCTACAACTGGTCTTGG
ATCAATAATCCGACGAATTATTCAGCAAGATACGACCTACTCCTCCGAAGTATTTTTGCCAGCGGCAAAACATCCATCCT
GGGAAGTTAAATATGACTGTATTCGATCAATTATCCGAGTTAATGATAAAGAAACGCTACGAGTTTTACTACCATTTTCC
ACAATGAGTTATTGGAAGGCACGGCGAACAATCGTTGAATACATTCGTGAGCGGATTCAACGAGGAGACTTAAATGCTGA
TGATAGACAGATTGCCGAACAGATTCTGTTGCAGATATGCTCAGACGGCAAAACGGCCGAAAAAACACCTACTATGAGAT
TAGCAAGAGAAACGTTAGCAACTCTTCAGGGAAAAACATTAAAACATACTAATAATCCTGTTATTTCAATTTTATTCATA
TCTAGTGATCCAACAGACACGGATAGACTTCGACTAGGTGCCGAAATTCGTGAACTACAGGAGCGATTACAATTGTCTAA
ATTGCGAGATTGTTTTATACTACATCAGCGCATGGCTGTTCGACCAATCGATATCATTCAAGCACTCCTTGATCTAGAAC
CACAAATTGTACATTTTTCTGGACATGGTAACGCTCGTGGAGCATTATACTTAGAAGATCGACAAGGAAAAGCACTACCT
GTTGAACCGGAAGCGCTTGCAGCTCTCTTTAAACAATTCTCTAATCAAGTACGTTGTGTCATCTTGAATGCGTGTTATTC
TGAAACACAAGCAAAAGCAATCTCGCAACACATCGAATATGTGATTGGCATGGATCATACCATCAGCGATGAGGCTGCGA
TTGCATTTTCTGTCGGTTTCTATCAGGGACTGGGAAGTGGTCGAACCATTGAAGAGTCCTACCACCTTGGCTGTGTTCAT
ATCCATCTACATGGACTACCAGAACATCTCACTCCGGTATTGTTGAAGCGGGTATAG

Upstream 100 bases:

>100_bases
ATTCTGTGGTGTATTGACCGAATTTTGAAATGAGTTCTAGATAAAATATACTCATCACGTAGAATGTAGAGCAAGACTTA
TGTAGTTGTAGAGGAATGCT

Downstream 100 bases:

>100_bases
ACCACTCCCTCACCACCACCAGCAACCAAAAGCTAAACGCCAGATCAGGCCAGAAGTAGAAAGCGTCAACCAGACCATGC
GTCAGCGCACCGGCCATCGT

Product: TIR protein

Products: NA

Alternate protein names: Tir Protein; WD-Containing Repeat Protein; WD Repeat-Containing Protein

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MINTNAWDVFISYASEDRETVAAPLAEALRVNGLRVWYDQFELTPGKQLLQSIDEGLRESRFGIVVLSPHFFAKEWPLRE
LAGLYTRSIQEGQKPFIIPIWYQLNVSEIARYSPLLSNIIAIPWDSGIEIVVQKILSVINAGRVANPDQQYIRVLSEVYN
TLHHEDIDEEIKRILAMYPLHLIQQALEALLRKNDLRSTVRAKAFSILCKHQISRTEIINEILASTNTSLLKEIITILSS
TNIMLSKEQIHILLSNPHLPRSTTGLGSIIRRIIQQDTTYSSEVFLPAAKHPSWEVKYDCIRSIIRVNDKETLRVLLPFS
TMSYWKARRTIVEYIRERIQRGDLNADDRQIAEQILLQICSDGKTAEKTPTMRLARETLATLQGKTLKHTNNPVISILFI
SSDPTDTDRLRLGAEIRELQERLQLSKLRDCFILHQRMAVRPIDIIQALLDLEPQIVHFSGHGNARGALYLEDRQGKALP
VEPEALAALFKQFSNQVRCVILNACYSETQAKAISQHIEYVIGMDHTISDEAAIAFSVGFYQGLGSGRTIEESYHLGCVH
IHLHGLPEHLTPVLLKRV

Sequences:

>Translated_578_residues
MINTNAWDVFISYASEDRETVAAPLAEALRVNGLRVWYDQFELTPGKQLLQSIDEGLRESRFGIVVLSPHFFAKEWPLRE
LAGLYTRSIQEGQKPFIIPIWYQLNVSEIARYSPLLSNIIAIPWDSGIEIVVQKILSVINAGRVANPDQQYIRVLSEVYN
TLHHEDIDEEIKRILAMYPLHLIQQALEALLRKNDLRSTVRAKAFSILCKHQISRTEIINEILASTNTSLLKEIITILSS
TNIMLSKEQIHILLSNPHLPRSTTGLGSIIRRIIQQDTTYSSEVFLPAAKHPSWEVKYDCIRSIIRVNDKETLRVLLPFS
TMSYWKARRTIVEYIRERIQRGDLNADDRQIAEQILLQICSDGKTAEKTPTMRLARETLATLQGKTLKHTNNPVISILFI
SSDPTDTDRLRLGAEIRELQERLQLSKLRDCFILHQRMAVRPIDIIQALLDLEPQIVHFSGHGNARGALYLEDRQGKALP
VEPEALAALFKQFSNQVRCVILNACYSETQAKAISQHIEYVIGMDHTISDEAAIAFSVGFYQGLGSGRTIEESYHLGCVH
IHLHGLPEHLTPVLLKRV
>Mature_578_residues
MINTNAWDVFISYASEDRETVAAPLAEALRVNGLRVWYDQFELTPGKQLLQSIDEGLRESRFGIVVLSPHFFAKEWPLRE
LAGLYTRSIQEGQKPFIIPIWYQLNVSEIARYSPLLSNIIAIPWDSGIEIVVQKILSVINAGRVANPDQQYIRVLSEVYN
TLHHEDIDEEIKRILAMYPLHLIQQALEALLRKNDLRSTVRAKAFSILCKHQISRTEIINEILASTNTSLLKEIITILSS
TNIMLSKEQIHILLSNPHLPRSTTGLGSIIRRIIQQDTTYSSEVFLPAAKHPSWEVKYDCIRSIIRVNDKETLRVLLPFS
TMSYWKARRTIVEYIRERIQRGDLNADDRQIAEQILLQICSDGKTAEKTPTMRLARETLATLQGKTLKHTNNPVISILFI
SSDPTDTDRLRLGAEIRELQERLQLSKLRDCFILHQRMAVRPIDIIQALLDLEPQIVHFSGHGNARGALYLEDRQGKALP
VEPEALAALFKQFSNQVRCVILNACYSETQAKAISQHIEYVIGMDHTISDEAAIAFSVGFYQGLGSGRTIEESYHLGCVH
IHLHGLPEHLTPVLLKRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65735; Mature: 65735

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS50104 TIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINTNAWDVFISYASEDRETVAAPLAEALRVNGLRVWYDQFELTPGKQLLQSIDEGLRES
CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEHHHCCCCHHHHHHHHHHHHHHC
RFGIVVLSPHFFAKEWPLRELAGLYTRSIQEGQKPFIIPIWYQLNVSEIARYSPLLSNII
CCCEEEECCCHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHCEE
AIPWDSGIEIVVQKILSVINAGRVANPDQQYIRVLSEVYNTLHHEDIDEEIKRILAMYPL
ECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
HLIQQALEALLRKNDLRSTVRAKAFSILCKHQISRTEIINEILASTNTSLLKEIITILSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
TNIMLSKEQIHILLSNPHLPRSTTGLGSIIRRIIQQDTTYSSEVFLPAAKHPSWEVKYDC
CCEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHH
IRSIIRVNDKETLRVLLPFSTMSYWKARRTIVEYIRERIQRGDLNADDRQIAEQILLQIC
HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SDGKTAEKTPTMRLARETLATLQGKTLKHTNNPVISILFISSDPTDTDRLRLGAEIRELQ
CCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
ERLQLSKLRDCFILHQRMAVRPIDIIQALLDLEPQIVHFSGHGNARGALYLEDRQGKALP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCC
VEPEALAALFKQFSNQVRCVILNACYSETQAKAISQHIEYVIGMDHTISDEAAIAFSVGF
CCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHH
YQGLGSGRTIEESYHLGCVHIHLHGLPEHLTPVLLKRV
HHCCCCCCEECCCCCEEEEEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MINTNAWDVFISYASEDRETVAAPLAEALRVNGLRVWYDQFELTPGKQLLQSIDEGLRES
CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEHHHCCCCHHHHHHHHHHHHHHC
RFGIVVLSPHFFAKEWPLRELAGLYTRSIQEGQKPFIIPIWYQLNVSEIARYSPLLSNII
CCCEEEECCCHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHCEE
AIPWDSGIEIVVQKILSVINAGRVANPDQQYIRVLSEVYNTLHHEDIDEEIKRILAMYPL
ECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
HLIQQALEALLRKNDLRSTVRAKAFSILCKHQISRTEIINEILASTNTSLLKEIITILSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
TNIMLSKEQIHILLSNPHLPRSTTGLGSIIRRIIQQDTTYSSEVFLPAAKHPSWEVKYDC
CCEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHH
IRSIIRVNDKETLRVLLPFSTMSYWKARRTIVEYIRERIQRGDLNADDRQIAEQILLQIC
HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SDGKTAEKTPTMRLARETLATLQGKTLKHTNNPVISILFISSDPTDTDRLRLGAEIRELQ
CCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
ERLQLSKLRDCFILHQRMAVRPIDIIQALLDLEPQIVHFSGHGNARGALYLEDRQGKALP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCC
VEPEALAALFKQFSNQVRCVILNACYSETQAKAISQHIEYVIGMDHTISDEAAIAFSVGF
CCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHH
YQGLGSGRTIEESYHLGCVHIHLHGLPEHLTPVLLKRV
HHCCCCCCEECCCCCEEEEEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA