| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525874
Identifier: 222525874
GI number: 222525874
Start: 3264237
End: 3264839
Strand: Reverse
Name: 222525874
Synonym: Chy400_2627
Alternate gene names: NA
Gene position: 3264839-3264237 (Counterclockwise)
Preceding gene: 222525877
Following gene: 222525873
Centisome position: 61.96
GC content: 55.22
Gene sequence:
>603_bases ATGATACGTTATCTCGCTATGTTACTCGGCATTGCGACGCTCGGTGCACTGACCTGGCCTGCCGGTGCAGTGCATGCTCG ACCGGGCCAGCCCGACACTCCAATCACTGTCACCGGAACGGTCGTGTCGTTCAACTATGCGCCACGGGGCGAAATAGATG GCTTCTATCTCGATAGCGGTGTCGAAGTCCGTACACCAAAGCATTGGGAATGGGAACTTTCCCAGACCATAACCATCGGC TCGTCGGTACAGGTAGATGGCCGCCAGCGTATTGGCCGCCGGGGTGAAATCCACGTCAAGGCACAGGTTATTACCAACCT GACCACGAACGCCCGTTTAGTCATCGAAGAGGTCGTCAACCTGGAAGGCCAGGTGGTAAACTACACCTATAGCCGCAGTG GCCGAATTGATGGCTTTGTGCTCACTACCGGCGATGAGGTACGCACACCACCACACCTATCGGCAGCTATCACGAACACG ATCCCGCCTGGTTCTGCGGTACAGGTAGCTGGTGTGCGCAAAACCGGTAAATACGGTGATGTACATATCAAACCCGACAC CATTACCAATCTTGCAACCGGCACGGTAATCGTCATTCCGTAG
Upstream 100 bases:
>100_bases TCTTCAGAATCTCTTCAGTTTTTCTTCGGTTTCTATTCAGGCTTGATCGGTATACTGCCTTTGCCGACAGCAATGAGGAC GGCAAGGAAAGGATACAACG
Downstream 100 bases:
>100_bases CAAGAAGGCAACGCTTATTGTGATGCTGTCGGAAGGTTTGGGTGCGACCACGATGGTCGCATCCGAATTCCATTTCAACC GCAACGGCTGCTACGAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MIRYLAMLLGIATLGALTWPAGAVHARPGQPDTPITVTGTVVSFNYAPRGEIDGFYLDSGVEVRTPKHWEWELSQTITIG SSVQVDGRQRIGRRGEIHVKAQVITNLTTNARLVIEEVVNLEGQVVNYTYSRSGRIDGFVLTTGDEVRTPPHLSAAITNT IPPGSAVQVAGVRKTGKYGDVHIKPDTITNLATGTVIVIP
Sequences:
>Translated_200_residues MIRYLAMLLGIATLGALTWPAGAVHARPGQPDTPITVTGTVVSFNYAPRGEIDGFYLDSGVEVRTPKHWEWELSQTITIG SSVQVDGRQRIGRRGEIHVKAQVITNLTTNARLVIEEVVNLEGQVVNYTYSRSGRIDGFVLTTGDEVRTPPHLSAAITNT IPPGSAVQVAGVRKTGKYGDVHIKPDTITNLATGTVIVIP >Mature_200_residues MIRYLAMLLGIATLGALTWPAGAVHARPGQPDTPITVTGTVVSFNYAPRGEIDGFYLDSGVEVRTPKHWEWELSQTITIG SSVQVDGRQRIGRRGEIHVKAQVITNLTTNARLVIEEVVNLEGQVVNYTYSRSGRIDGFVLTTGDEVRTPPHLSAAITNT IPPGSAVQVAGVRKTGKYGDVHIKPDTITNLATGTVIVIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21538; Mature: 21538
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRYLAMLLGIATLGALTWPAGAVHARPGQPDTPITVTGTVVSFNYAPRGEIDGFYLDSG CHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCCCCEEECCC VEVRTPKHWEWELSQTITIGSSVQVDGRQRIGRRGEIHVKAQVITNLTTNARLVIEEVVN EEEECCCCCEEEEEEEEEECCEEEECHHHHCCCCCCEEEEEEEEEECCCCCEEEEEHHHC LEGQVVNYTYSRSGRIDGFVLTTGDEVRTPPHLSAAITNTIPPGSAVQVAGVRKTGKYGD CCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCE VHIKPDTITNLATGTVIVIP EEECCCCCCCCCCCEEEEEC >Mature Secondary Structure MIRYLAMLLGIATLGALTWPAGAVHARPGQPDTPITVTGTVVSFNYAPRGEIDGFYLDSG CHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCCCCEEECCC VEVRTPKHWEWELSQTITIGSSVQVDGRQRIGRRGEIHVKAQVITNLTTNARLVIEEVVN EEEECCCCCEEEEEEEEEECCEEEECHHHHCCCCCCEEEEEEEEEECCCCCEEEEEHHHC LEGQVVNYTYSRSGRIDGFVLTTGDEVRTPPHLSAAITNTIPPGSAVQVAGVRKTGKYGD CCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCE VHIKPDTITNLATGTVIVIP EEECCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA