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The map label for this gene is ykoG [H]

Identifier: 222525873

GI number: 222525873

Start: 3263409

End: 3264125

Strand: Reverse

Name: ykoG [H]

Synonym: Chy400_2626

Alternate gene names: 222525873

Gene position: 3264125-3263409 (Counterclockwise)

Preceding gene: 222525874

Following gene: 222525872

Centisome position: 61.95

GC content: 53.28

Gene sequence:

>717_bases
ATGAAATCAACAGAAACTGATCGCGAATTACACATTCTGGTTATCGAAGATGAGCCAACCATCGCCGAATCCCTCCGCGT
TGGCTTAACGTATGAAGGTATGCGGGTCACTGTGACAACCGAAGGGCGGAGCGGTTTACAAGTGAGCGAAGAGCAAGAGG
TTGATCTGGTCATCCTTGATCTGATGCTCCCCGACATCGACGGCATGGTTGTTTGTCGGCGCCTGCGCGCTCGTTCCAGC
ACGCTACCCATCATCATGCTGACGGCCCGTGGTGAGGTGCAAGAGCGGGTACAGGGGTTACAATTAGGAGCCGACGATTA
TATCGTCAAGCCATTTAGCTTCGATGAATTATTAGCCCGCGTCTACGCTGTCTTGCGGCGAGCTGGTGTCAGTCGGCCAT
CAACCGTGCTGCGGATTGCCGGTCTCACCCTCGACACCGAAACCCGGGAAGTGACGCTTAATGGCCGGCAATTAGAGTTG
ACCCCCACCGAATTCGCACTCCTTGAGCTATTCATGCGCCATCCCCGTCGGGTATTTACCAGAGAGACCCTGCTCAGTCG
GGTATGGGGGTTCACGTATGTCGGCGACTCAAACATCGTTGAAGTACATATGAGCAATCTACGTGAAAAGATAGGTGATC
ATGAGCGCAAACTCATCCGTACCATCTATGGCGTCGGCTACTGTTTACGGCCTGAAGATGAAACAGCAGTGGCATAG

Upstream 100 bases:

>100_bases
CGCTTATTGTGATGCTGTCGGAAGGTTTGGGTGCGACCACGATGGTCGCATCCGAATTCCATTTCAACCGCAACGGCTGC
TACGAGTCAGGGGTAGTTTT

Downstream 100 bases:

>100_bases
ATTATCGTTGCGGCAACGACTGGCGTTGTTGTACAGCGGCCTGCTGGCCCTGCTTTTATGTCTACTTGGCTTCGGCTTCT
ACCTCGATATGCGCCAGTTT

Product: winged helix family two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKSTETDRELHILVIEDEPTIAESLRVGLTYEGMRVTVTTEGRSGLQVSEEQEVDLVILDLMLPDIDGMVVCRRLRARSS
TLPIIMLTARGEVQERVQGLQLGADDYIVKPFSFDELLARVYAVLRRAGVSRPSTVLRIAGLTLDTETREVTLNGRQLEL
TPTEFALLELFMRHPRRVFTRETLLSRVWGFTYVGDSNIVEVHMSNLREKIGDHERKLIRTIYGVGYCLRPEDETAVA

Sequences:

>Translated_238_residues
MKSTETDRELHILVIEDEPTIAESLRVGLTYEGMRVTVTTEGRSGLQVSEEQEVDLVILDLMLPDIDGMVVCRRLRARSS
TLPIIMLTARGEVQERVQGLQLGADDYIVKPFSFDELLARVYAVLRRAGVSRPSTVLRIAGLTLDTETREVTLNGRQLEL
TPTEFALLELFMRHPRRVFTRETLLSRVWGFTYVGDSNIVEVHMSNLREKIGDHERKLIRTIYGVGYCLRPEDETAVA
>Mature_238_residues
MKSTETDRELHILVIEDEPTIAESLRVGLTYEGMRVTVTTEGRSGLQVSEEQEVDLVILDLMLPDIDGMVVCRRLRARSS
TLPIIMLTARGEVQERVQGLQLGADDYIVKPFSFDELLARVYAVLRRAGVSRPSTVLRIAGLTLDTETREVTLNGRQLEL
TPTEFALLELFMRHPRRVFTRETLLSRVWGFTYVGDSNIVEVHMSNLREKIGDHERKLIRTIYGVGYCLRPEDETAVA

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=43.1111111111111, Blast_Score=187, Evalue=4e-49,
Organism=Escherichia coli, GI1789402, Length=220, Percent_Identity=41.8181818181818, Blast_Score=163, Evalue=9e-42,
Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=41.8181818181818, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=39.8190045248869, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1790552, Length=226, Percent_Identity=37.6106194690265, Blast_Score=149, Evalue=1e-37,
Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=38.7387387387387, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1789809, Length=234, Percent_Identity=36.7521367521368, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=38.7387387387387, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=36.6515837104072, Blast_Score=134, Evalue=4e-33,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=31.981981981982, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=35.6828193832599, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=36.1233480176211, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI145693140, Length=234, Percent_Identity=31.1965811965812, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=30.8370044052863, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=32.0754716981132, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1790437, Length=114, Percent_Identity=32.4561403508772, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1788713, Length=109, Percent_Identity=36.697247706422, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788905, Length=130, Percent_Identity=31.5384615384615, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790299, Length=110, Percent_Identity=30, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI145693157, Length=114, Percent_Identity=28.9473684210526, Blast_Score=63, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=110, Percent_Identity=30, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27018; Mature: 27018

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTETDRELHILVIEDEPTIAESLRVGLTYEGMRVTVTTEGRSGLQVSEEQEVDLVILD
CCCCCCCCEEEEEEECCCCCHHHHHEECEEECCEEEEEEECCCCCCCCCCCCCCCEEEEE
LMLPDIDGMVVCRRLRARSSTLPIIMLTARGEVQERVQGLQLGADDYIVKPFSFDELLAR
ECCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEECCCCHHHHHHH
VYAVLRRAGVSRPSTVLRIAGLTLDTETREVTLNGRQLELTPTEFALLELFMRHPRRVFT
HHHHHHHHCCCCCCCEEEEECEEEECCCEEEEECCCEEEECHHHHHHHHHHHHCCHHHHH
RETLLSRVWGFTYVGDSNIVEVHMSNLREKIGDHERKLIRTIYGVGYCLRPEDETAVA
HHHHHHHHCCEEEECCCCEEEEEHHHHHHHHCHHHHHHHHHHHHCCEEECCCCCCCCC
>Mature Secondary Structure
MKSTETDRELHILVIEDEPTIAESLRVGLTYEGMRVTVTTEGRSGLQVSEEQEVDLVILD
CCCCCCCCEEEEEEECCCCCHHHHHEECEEECCEEEEEEECCCCCCCCCCCCCCCEEEEE
LMLPDIDGMVVCRRLRARSSTLPIIMLTARGEVQERVQGLQLGADDYIVKPFSFDELLAR
ECCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEECCCCHHHHHHH
VYAVLRRAGVSRPSTVLRIAGLTLDTETREVTLNGRQLELTPTEFALLELFMRHPRRVFT
HHHHHHHHCCCCCCCEEEEECEEEECCCEEEEECCCEEEECHHHHHHHHHHHHCCHHHHH
RETLLSRVWGFTYVGDSNIVEVHMSNLREKIGDHERKLIRTIYGVGYCLRPEDETAVA
HHHHHHHHCCEEEECCCCEEEEEHHHHHHHHCHHHHHHHHHHHHCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]