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The map label for this gene is crtP [H]

Identifier: 222525844

GI number: 222525844

Start: 3231508

End: 3232995

Strand: Reverse

Name: crtP [H]

Synonym: Chy400_2597

Alternate gene names: 222525844

Gene position: 3232995-3231508 (Counterclockwise)

Preceding gene: 222525845

Following gene: 222525795

Centisome position: 61.36

GC content: 56.59

Gene sequence:

>1488_bases
ATGAAAACCTCACCACTCCCAATTATCGTTGTTGGCGGTGGCCTGGGGGGGCTGGCCGCCGCAATTCGGCTGGCTGCCCA
GGGTCGTCGAGTTATTCTGTGCGAGAAGAATGAACGACTCGGTGGTAAGCTCAATCTCCATCAGGCTGCCGGATATACGT
TCGACACCGGGCCATCGTTATTGACGATGCCGTGGGTGATTCGCGATCTCTTCGCAGCCGCCAATCGTTGTATGGACGAT
TATCTCCGGCTTGAACAGATTGAACCGACCTGTCGCTATCTCTGGCCTGACGGTACGCGCTTCGATGCCTGGCAACGGTT
ACCCCAGTTGATACAGGAGATTGAACGCCTTAGCCCACCTGATGTTCCCGCGTTCTTTCGCTTCATGGCACATACCAGTC
GAATCTATGATGCAGTTTCCGGACCATTTTTGTTGCGTCCGTTCGATGGCCTGCGTGAACTGTTGACCCCATCGCTGATC
CGCCATGCCCTGCGGATCGACGCGCTGCGCAGCGTTGACACTGCGGTACGTTCATTCTTTCGCAGCCCTCATCTACGCCA
GGTCTTTAACCGGTATGCGACCTACAACGGTTCATCACCCTACCGATCACCGGCCACATTTAACCTGATTGCCTATATTG
AACTGGCCGAGGGTGGCTGGTATGTTCGCGGTGGCATGTATCAATTGGCTGTTGCGCTGAACCGGCTAGCTACTGAGTTA
GGGGTTGAAATTCGTTTGCAGACACCGGTGACTGAGGTGATCGTCGATCACAGTCGTGCCTGTGGTGTCCGTCTGGCCGA
TGGGAGTAACCTACCCGCTGCGGCGGTGGTCGTGAATGCAGATCCGCAGTATGCCTACACTCACCTGATCCCTGACGGTC
GGCAAGAGGCGGATCGCCTCGCTCGCCATGAACCATCGTACAGCGGCGTCGTGCTCTTTCTCGGCGTTGAAGGCGAGTTT
CCGCAATTGGCTCATCACAATATCTTCTTCAGTGCTGACTATCCCGGTGAATTTCAAGCCATCGTGCACGAGCACCGACT
GGCTCTTGATCCAACTGTATACGTCGCTGTGACCTGCCGCACCGACCCAGAGCACGCACCACCCGGCCATCTCAATCTAT
TCGTGCTGGTTAATGCACCTGCCGATACTGGTCAGATTGACTGGGCAGCCGTGATGCCAGCCTACCGCGACCATATTATC
GCCAAACTTGAGACGATGGGTTTGCCAGGGTTGCGGCAGGCCATTCGCTATAGCCATTTCTGGACGCCGTGCGATCTGGC
CCACCGTTATAACGCTGCATTTGGTTCGATCTATGGGCTTAGCTCGAACACACCTTTCTCTGCATTCGCCCGTCCGCCAC
TGCGGGCACGGCGCGTGCGCCAGCTCTACTTTGTGGGTGGGGGAACCCATCCGGGCGGAGGAATTCCACTGGTGCTGTTG
TCTGGGCGGGCAGTTGCTGCTCGTATCGCGGCTGATATGCCTGTCTAA

Upstream 100 bases:

>100_bases
GTACGCAAAGCCCACAGAGCATACGCTCGACGTGGAGCAATCCTTAGCGGGCAGATGATACTGACAAAAACCATATAATA
TCAAAGACACATCTGACACT

Downstream 100 bases:

>100_bases
CAAAAAACTCTTTACACTTATTTGCAATAACAGGAATGGTTTGAACCATATTTTAACTTTACGACGGTAAATCGTAGAAA
CAATTGCGGTTTATCATCGT

Product: phytoene desaturase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MKTSPLPIIVVGGGLGGLAAAIRLAAQGRRVILCEKNERLGGKLNLHQAAGYTFDTGPSLLTMPWVIRDLFAAANRCMDD
YLRLEQIEPTCRYLWPDGTRFDAWQRLPQLIQEIERLSPPDVPAFFRFMAHTSRIYDAVSGPFLLRPFDGLRELLTPSLI
RHALRIDALRSVDTAVRSFFRSPHLRQVFNRYATYNGSSPYRSPATFNLIAYIELAEGGWYVRGGMYQLAVALNRLATEL
GVEIRLQTPVTEVIVDHSRACGVRLADGSNLPAAAVVVNADPQYAYTHLIPDGRQEADRLARHEPSYSGVVLFLGVEGEF
PQLAHHNIFFSADYPGEFQAIVHEHRLALDPTVYVAVTCRTDPEHAPPGHLNLFVLVNAPADTGQIDWAAVMPAYRDHII
AKLETMGLPGLRQAIRYSHFWTPCDLAHRYNAAFGSIYGLSSNTPFSAFARPPLRARRVRQLYFVGGGTHPGGGIPLVLL
SGRAVAARIAADMPV

Sequences:

>Translated_495_residues
MKTSPLPIIVVGGGLGGLAAAIRLAAQGRRVILCEKNERLGGKLNLHQAAGYTFDTGPSLLTMPWVIRDLFAAANRCMDD
YLRLEQIEPTCRYLWPDGTRFDAWQRLPQLIQEIERLSPPDVPAFFRFMAHTSRIYDAVSGPFLLRPFDGLRELLTPSLI
RHALRIDALRSVDTAVRSFFRSPHLRQVFNRYATYNGSSPYRSPATFNLIAYIELAEGGWYVRGGMYQLAVALNRLATEL
GVEIRLQTPVTEVIVDHSRACGVRLADGSNLPAAAVVVNADPQYAYTHLIPDGRQEADRLARHEPSYSGVVLFLGVEGEF
PQLAHHNIFFSADYPGEFQAIVHEHRLALDPTVYVAVTCRTDPEHAPPGHLNLFVLVNAPADTGQIDWAAVMPAYRDHII
AKLETMGLPGLRQAIRYSHFWTPCDLAHRYNAAFGSIYGLSSNTPFSAFARPPLRARRVRQLYFVGGGTHPGGGIPLVLL
SGRAVAARIAADMPV
>Mature_495_residues
MKTSPLPIIVVGGGLGGLAAAIRLAAQGRRVILCEKNERLGGKLNLHQAAGYTFDTGPSLLTMPWVIRDLFAAANRCMDD
YLRLEQIEPTCRYLWPDGTRFDAWQRLPQLIQEIERLSPPDVPAFFRFMAHTSRIYDAVSGPFLLRPFDGLRELLTPSLI
RHALRIDALRSVDTAVRSFFRSPHLRQVFNRYATYNGSSPYRSPATFNLIAYIELAEGGWYVRGGMYQLAVALNRLATEL
GVEIRLQTPVTEVIVDHSRACGVRLADGSNLPAAAVVVNADPQYAYTHLIPDGRQEADRLARHEPSYSGVVLFLGVEGEF
PQLAHHNIFFSADYPGEFQAIVHEHRLALDPTVYVAVTCRTDPEHAPPGHLNLFVLVNAPADTGQIDWAAVMPAYRDHII
AKLETMGLPGLRQAIRYSHFWTPCDLAHRYNAAFGSIYGLSSNTPFSAFARPPLRARRVRQLYFVGGGTHPGGGIPLVLL
SGRAVAARIAADMPV

Specific function: Catalyzes the oxidation of the terminal methyl side group of 4,4'-diaponeurosporene to form 4,4'-diaponeurosporenoate (4,4'-diaponeurosporenic acid), via the aldehyde intermediate 4,4'-diaponeurosporenal. This is an intermediate step in the biosynthesis o

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family. CrtP subfamily [H]

Homologues:

Organism=Caenorhabditis elegans, GI17540238, Length=528, Percent_Identity=21.0227272727273, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 54783; Mature: 54783

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSPLPIIVVGGGLGGLAAAIRLAAQGRRVILCEKNERLGGKLNLHQAAGYTFDTGPSL
CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEHHHCCEEECCCCCE
LTMPWVIRDLFAAANRCMDDYLRLEQIEPTCRYLWPDGTRFDAWQRLPQLIQEIERLSPP
EEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCC
DVPAFFRFMAHTSRIYDAVSGPFLLRPFDGLRELLTPSLIRHALRIDALRSVDTAVRSFF
CHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
RSPHLRQVFNRYATYNGSSPYRSPATFNLIAYIELAEGGWYVRGGMYQLAVALNRLATEL
CCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCEEEECCHHHHHHHHHHHHHHH
GVEIRLQTPVTEVIVDHSRACGVRLADGSNLPAAAVVVNADPQYAYTHLIPDGRQEADRL
CCEEEEECCHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHH
ARHEPSYSGVVLFLGVEGEFPQLAHHNIFFSADYPGEFQAIVHEHRLALDPTVYVAVTCR
HHCCCCCCCEEEEEECCCCCCCHHCCEEEEECCCCCHHHHHHHHHHEEECCEEEEEEEEC
TDPEHAPPGHLNLFVLVNAPADTGQIDWAAVMPAYRDHIIAKLETMGLPGLRQAIRYSHF
CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
WTPCDLAHRYNAAFGSIYGLSSNTPFSAFARPPLRARRVRQLYFVGGGTHPGGGIPLVLL
CCCHHHHHHHCCHHHEEEECCCCCCCHHHCCCCHHHHHEEEEEEEECCCCCCCCCEEEEE
SGRAVAARIAADMPV
CCCCEEHHHHHCCCC
>Mature Secondary Structure
MKTSPLPIIVVGGGLGGLAAAIRLAAQGRRVILCEKNERLGGKLNLHQAAGYTFDTGPSL
CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEHHHCCEEECCCCCE
LTMPWVIRDLFAAANRCMDDYLRLEQIEPTCRYLWPDGTRFDAWQRLPQLIQEIERLSPP
EEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCC
DVPAFFRFMAHTSRIYDAVSGPFLLRPFDGLRELLTPSLIRHALRIDALRSVDTAVRSFF
CHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
RSPHLRQVFNRYATYNGSSPYRSPATFNLIAYIELAEGGWYVRGGMYQLAVALNRLATEL
CCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCEEEECCHHHHHHHHHHHHHHH
GVEIRLQTPVTEVIVDHSRACGVRLADGSNLPAAAVVVNADPQYAYTHLIPDGRQEADRL
CCEEEEECCHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHH
ARHEPSYSGVVLFLGVEGEFPQLAHHNIFFSADYPGEFQAIVHEHRLALDPTVYVAVTCR
HHCCCCCCCEEEEEECCCCCCCHHCCEEEEECCCCCHHHHHHHHHHEEECCEEEEEEEEC
TDPEHAPPGHLNLFVLVNAPADTGQIDWAAVMPAYRDHIIAKLETMGLPGLRQAIRYSHF
CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
WTPCDLAHRYNAAFGSIYGLSSNTPFSAFARPPLRARRVRQLYFVGGGTHPGGGIPLVLL
CCCHHHHHHHCCHHHEEEECCCCCCCHHHCCCCHHHHHEEEEEEEECCCCCCCCCEEEEE
SGRAVAARIAADMPV
CCCCEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA