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The map label for this gene is 222525759

Identifier: 222525759

GI number: 222525759

Start: 3156204

End: 3156764

Strand: Reverse

Name: 222525759

Synonym: Chy400_2512

Alternate gene names: NA

Gene position: 3156764-3156204 (Counterclockwise)

Preceding gene: 222525760

Following gene: 222525758

Centisome position: 59.91

GC content: 46.35

Gene sequence:

>561_bases
GTGCCGATACTGTTACGCATTTCACGAATTATCGATACCTTTACTGAATGGGTCGGACGTATAGCTTATTTTCTAGTTCC
CATCGTTGTTGCGGTTGGGGTATGGAACGTTGCAAATCGGTACGTTGGACGGGCAATTGGGCGCACCCTTGGTTCTAATT
TCTATATTGAAGCCCAGTGGTACATCTTCTCTTTAATCTTTTTGCTCGGTGCTGCATACGCATTAAAGCATAATGAGCAC
GTGCGGGTTGACGTATTTTACAGTAACTTTTCACCACAACGCAAAGCCCTAGTCAATTTTTTAGGAACTCTCTTCTTCCT
CATACCTTTCTGCGGATTGCTTATCTACTTCGGCTGGCCGTATGTCGAGCAATCATGGCGCATCCGCGAAAATTCGCCTG
ACCCCGGTGGTCTGCCAAGGTATATCATTAAAACATTCCTGATAGTCAGCCCGACTCTCCTGATTATTCAGGGTATATCT
GAAGCGATAAAATATTTTGCCGCCTGGCGAGGTGTCCTTGATCCATCGCAGGTTGAGGAAGAGCACGAGACGCGCTTGTA
A

Upstream 100 bases:

>100_bases
CATCATGCGTGGAAGCGAATTGCAACAATTATGTTGCTAACTGATCATGGCTCATTCTTGCGTCGTGAATAACGCTTTGA
TCAGGAAAGGAAGGGTTAGT

Downstream 100 bases:

>100_bases
TTTGTGGAGGATTCATGTACGACTGGCTCGGACCCACGATGTTCCTTGGAGCGCTGGTCATTCTCGGGATCGGCTATCCG
GTTGCATTTTCGCTGGGGGC

Product: Tripartite ATP-independent periplasmic transporter DctQ component

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; Mannitol Transporter; Trap Dicarboxylate Transporter Dctm Subunit; Tripartite Transporter Small Subunit; TRAP-T Family Tripartite Transporter; TRAP Transporter Small Transmembrane Protein; Transporter DctQ Related Transmembrane Protein; C4-Dicarboxylate Transporter Permease; Tripartite ATP-Independent Periplasmic Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; Permease Component Of C4 Dicarboxylate Transporter; Permease; Small Integral Membrane Tranport Protein; TRAP Transporter DctQ Family Protein; Transmembrane Transporter Component; TRAP C4-Dicarboxylate Transport System DctQ Subunit; TRAP Dicarboxylate Transporter Subunit DctQ; TRAP Dicarboxylate Family Transporter DctQ Subunit; TRAP-Type Transporter Small Permease Component; Small Permease Of TRAP-Type Transporter; Trap-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter; TRAP-Type Large Permease Component; TRAP Transporter DctQ-Like Membrane Protein Family; Triosephosphate Isomerase (TIM; TRAP-Type Transport System Small Permease Component; TRAP Transporter Small Subunit; TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Protein; Permease Protein; Tripartite ATP-Independent Periplasmic; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MPILLRISRIIDTFTEWVGRIAYFLVPIVVAVGVWNVANRYVGRAIGRTLGSNFYIEAQWYIFSLIFLLGAAYALKHNEH
VRVDVFYSNFSPQRKALVNFLGTLFFLIPFCGLLIYFGWPYVEQSWRIRENSPDPGGLPRYIIKTFLIVSPTLLIIQGIS
EAIKYFAAWRGVLDPSQVEEEHETRL

Sequences:

>Translated_186_residues
MPILLRISRIIDTFTEWVGRIAYFLVPIVVAVGVWNVANRYVGRAIGRTLGSNFYIEAQWYIFSLIFLLGAAYALKHNEH
VRVDVFYSNFSPQRKALVNFLGTLFFLIPFCGLLIYFGWPYVEQSWRIRENSPDPGGLPRYIIKTFLIVSPTLLIIQGIS
EAIKYFAAWRGVLDPSQVEEEHETRL
>Mature_185_residues
PILLRISRIIDTFTEWVGRIAYFLVPIVVAVGVWNVANRYVGRAIGRTLGSNFYIEAQWYIFSLIFLLGAAYALKHNEHV
RVDVFYSNFSPQRKALVNFLGTLFFLIPFCGLLIYFGWPYVEQSWRIRENSPDPGGLPRYIIKTFLIVSPTLLIIQGISE
AIKYFAAWRGVLDPSQVEEEHETRL

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21464; Mature: 21333

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILLRISRIIDTFTEWVGRIAYFLVPIVVAVGVWNVANRYVGRAIGRTLGSNFYIEAQW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHH
YIFSLIFLLGAAYALKHNEHVRVDVFYSNFSPQRKALVNFLGTLFFLIPFCGLLIYFGWP
HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
YVEQSWRIRENSPDPGGLPRYIIKTFLIVSPTLLIIQGISEAIKYFAAWRGVLDPSQVEE
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
EHETRL
HHHCCC
>Mature Secondary Structure 
PILLRISRIIDTFTEWVGRIAYFLVPIVVAVGVWNVANRYVGRAIGRTLGSNFYIEAQW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHH
YIFSLIFLLGAAYALKHNEHVRVDVFYSNFSPQRKALVNFLGTLFFLIPFCGLLIYFGWP
HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
YVEQSWRIRENSPDPGGLPRYIIKTFLIVSPTLLIIQGISEAIKYFAAWRGVLDPSQVEE
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
EHETRL
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA