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The map label for this gene is yiaN [C]

Identifier: 222525758

GI number: 222525758

Start: 3154855

End: 3156189

Strand: Reverse

Name: yiaN [C]

Synonym: Chy400_2511

Alternate gene names: 222525758

Gene position: 3156189-3154855 (Counterclockwise)

Preceding gene: 222525759

Following gene: 222525757

Centisome position: 59.9

GC content: 53.71

Gene sequence:

>1335_bases
ATGTACGACTGGCTCGGACCCACGATGTTCCTTGGAGCGCTGGTCATTCTCGGGATCGGCTATCCGGTTGCATTTTCGCT
GGGGGCAACAGCGATTGTCTTCGGTATCATCGGCGTTTCACTTGGCATCTTTGACCCCATCATCATTCGGGCGATGCCAT
CACGTATCTTCAACGTGATGTCAAATTACACCCTGCTGGCAATCCCTTACTTTATCTTCCTCGGCTCAATGCTGGAAAAA
TCTGGCCTGGCAGAGGACTTACTCGATACGATGGGGATTCTCTTCGGCCCCGTGCGGGGTGGCCTGGCGATTGCGGTTGT
CGCTGTAGGTGCTTTGCTGGCAGCCACTACCGGCGTTGTTGCCGCAACAGTGGTGGCAATGGGATTGATTTCGCTGCCTA
TTATGTTGCGCTACAACTACAACAAAGAGCTGGCTTGTGGCGTGATTTGTGCTGCCGGTACACTAGGGCAGATTATTCCA
CCTTCGGTCGTTCTGGTGGTTCTCGGTGACCAGATCGGTGTTTCGGTTGGCAAACTCTTTCTCGGCTCGTTGATACCAGG
ACTTTTGCTGGCAGCGGCGCTGGCATTTTACTGTTGGATTGTTGCTTTACTGAAGCCAGAAATGGCACCAGCACTTCCAT
TATCGGCACGTTCGATCAGTGGTGCAGCCCTGGCGAAACGAGTAGTGCAGGTGATGATTCCCCCGCTTCTGCTCATTGTC
GCCGTACTCGGTTCTATTTTCTTCGGTATCTCGACGGCAACGGAGGCGGGGGCTGTTGGCGCACTTGGGGCAACGTTGCT
GGCGGCTGCTAATCGACGATTGACCTGGAAGAATTTCGTGGCGGTTTGCGATGCCACGATGCGCGCCACAACGATGGTTC
TCTTCATTTTAATTGGCTCGACCGCATTCGCCCTGGTGTTCCGCGCCTTGAGCGGCGATAAGTTTGTGTTCGATCTGATG
GCGAACCTGCCCGGCGGTGCCTGGGGCTTCCTGGTTGTCAGCATGCTTATCGTCTTCTTTCTCGGTTTTTTCATCGATTT
CTTCGAGATTTGCTTTATTGTGATCCCGCTCTTCGTTCCAGTAGCGCAGGCTCTCGGATTTGACCTGATATGGTTTGGTG
TGTTGCTCGGCGCTAATTTGCAGACCTCGTTCCTGACACCACCATTTGGTTTCGCTCTCTTCTACCTGCGCGGTGTTGCC
CCTCCAGGCATTACAACTGCCGATATTTACCGGGGTGTTGTACCGTTCATTGCGATCCAGCTTACGATTGTCGTTGTTTT
GATCTTCTTCCCGCAGTTGGCCCTCTATCTGCCGGCGATCTCCTTCGGCCAGTAG

Upstream 100 bases:

>100_bases
TATCTGAAGCGATAAAATATTTTGCCGCCTGGCGAGGTGTCCTTGATCCATCGCAGGTTGAGGAAGAGCACGAGACGCGC
TTGTAATTTGTGGAGGATTC

Downstream 100 bases:

>100_bases
AGAATTCACTATTCGCTGATACTGTACCGCATGAAACCAGCAGAGTGCGTAACCAATGCACTCTGCTGGTTTCATGTAAA
ATCAGCCATGCCAAATCTTG

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MYDWLGPTMFLGALVILGIGYPVAFSLGATAIVFGIIGVSLGIFDPIIIRAMPSRIFNVMSNYTLLAIPYFIFLGSMLEK
SGLAEDLLDTMGILFGPVRGGLAIAVVAVGALLAATTGVVAATVVAMGLISLPIMLRYNYNKELACGVICAAGTLGQIIP
PSVVLVVLGDQIGVSVGKLFLGSLIPGLLLAAALAFYCWIVALLKPEMAPALPLSARSISGAALAKRVVQVMIPPLLLIV
AVLGSIFFGISTATEAGAVGALGATLLAAANRRLTWKNFVAVCDATMRATTMVLFILIGSTAFALVFRALSGDKFVFDLM
ANLPGGAWGFLVVSMLIVFFLGFFIDFFEICFIVIPLFVPVAQALGFDLIWFGVLLGANLQTSFLTPPFGFALFYLRGVA
PPGITTADIYRGVVPFIAIQLTIVVVLIFFPQLALYLPAISFGQ

Sequences:

>Translated_444_residues
MYDWLGPTMFLGALVILGIGYPVAFSLGATAIVFGIIGVSLGIFDPIIIRAMPSRIFNVMSNYTLLAIPYFIFLGSMLEK
SGLAEDLLDTMGILFGPVRGGLAIAVVAVGALLAATTGVVAATVVAMGLISLPIMLRYNYNKELACGVICAAGTLGQIIP
PSVVLVVLGDQIGVSVGKLFLGSLIPGLLLAAALAFYCWIVALLKPEMAPALPLSARSISGAALAKRVVQVMIPPLLLIV
AVLGSIFFGISTATEAGAVGALGATLLAAANRRLTWKNFVAVCDATMRATTMVLFILIGSTAFALVFRALSGDKFVFDLM
ANLPGGAWGFLVVSMLIVFFLGFFIDFFEICFIVIPLFVPVAQALGFDLIWFGVLLGANLQTSFLTPPFGFALFYLRGVA
PPGITTADIYRGVVPFIAIQLTIVVVLIFFPQLALYLPAISFGQ
>Mature_444_residues
MYDWLGPTMFLGALVILGIGYPVAFSLGATAIVFGIIGVSLGIFDPIIIRAMPSRIFNVMSNYTLLAIPYFIFLGSMLEK
SGLAEDLLDTMGILFGPVRGGLAIAVVAVGALLAATTGVVAATVVAMGLISLPIMLRYNYNKELACGVICAAGTLGQIIP
PSVVLVVLGDQIGVSVGKLFLGSLIPGLLLAAALAFYCWIVALLKPEMAPALPLSARSISGAALAKRVVQVMIPPLLLIV
AVLGSIFFGISTATEAGAVGALGATLLAAANRRLTWKNFVAVCDATMRATTMVLFILIGSTAFALVFRALSGDKFVFDLM
ANLPGGAWGFLVVSMLIVFFLGFFIDFFEICFIVIPLFVPVAQALGFDLIWFGVLLGANLQTSFLTPPFGFALFYLRGVA
PPGITTADIYRGVVPFIAIQLTIVVVLIFFPQLALYLPAISFGQ

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=433, Percent_Identity=28.6374133949192, Blast_Score=119, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 46765; Mature: 46765

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDWLGPTMFLGALVILGIGYPVAFSLGATAIVFGIIGVSLGIFDPIIIRAMPSRIFNVM
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNYTLLAIPYFIFLGSMLEKSGLAEDLLDTMGILFGPVRGGLAIAVVAVGALLAATTGVV
HCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AATVVAMGLISLPIMLRYNYNKELACGVICAAGTLGQIIPPSVVLVVLGDQIGVSVGKLF
HHHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCCCCCCCHHEEEEECCHHHHHHHHHH
LGSLIPGLLLAAALAFYCWIVALLKPEMAPALPLSARSISGAALAKRVVQVMIPPLLLIV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AVLGSIFFGISTATEAGAVGALGATLLAAANRRLTWKNFVAVCDATMRATTMVLFILIGS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TAFALVFRALSGDKFVFDLMANLPGGAWGFLVVSMLIVFFLGFFIDFFEICFIVIPLFVP
HHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQALGFDLIWFGVLLGANLQTSFLTPPFGFALFYLRGVAPPGITTADIYRGVVPFIAIQ
HHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LTIVVVLIFFPQLALYLPAISFGQ
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYDWLGPTMFLGALVILGIGYPVAFSLGATAIVFGIIGVSLGIFDPIIIRAMPSRIFNVM
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNYTLLAIPYFIFLGSMLEKSGLAEDLLDTMGILFGPVRGGLAIAVVAVGALLAATTGVV
HCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AATVVAMGLISLPIMLRYNYNKELACGVICAAGTLGQIIPPSVVLVVLGDQIGVSVGKLF
HHHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCCCCCCCHHEEEEECCHHHHHHHHHH
LGSLIPGLLLAAALAFYCWIVALLKPEMAPALPLSARSISGAALAKRVVQVMIPPLLLIV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AVLGSIFFGISTATEAGAVGALGATLLAAANRRLTWKNFVAVCDATMRATTMVLFILIGS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TAFALVFRALSGDKFVFDLMANLPGGAWGFLVVSMLIVFFLGFFIDFFEICFIVIPLFVP
HHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQALGFDLIWFGVLLGANLQTSFLTPPFGFALFYLRGVAPPGITTADIYRGVVPFIAIQ
HHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LTIVVVLIFFPQLALYLPAISFGQ
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]