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The map label for this gene is ygdH [C]

Identifier: 222525737

GI number: 222525737

Start: 3131897

End: 3132619

Strand: Direct

Name: ygdH [C]

Synonym: Chy400_2488

Alternate gene names: 222525737

Gene position: 3131897-3132619 (Clockwise)

Preceding gene: 222525735

Following gene: 222525738

Centisome position: 59.44

GC content: 53.25

Gene sequence:

>723_bases
ATGTCACGACAGACAGAAGACGAACGATTGTTGCATACCGATCCCTATCGGCAGGTTCACGACTTTACCCATACGGATAC
CTGGCGGGTATTGCGCATTATGGGTGAATTTGTCGAGGGTTTCGAGAATATGGCCGGCCTGGGGCCTGCCGTCTCGATCT
TTGGCTCGGCCCGCATTCCACCGGCATCGCCAATCTACGCTGCGGCTACCGAAACGGCCCGCCTGCTGGCCCAGGCCGGG
TTTACGATCATTACCGGTGGTGGCCCCGGTCTGATGGAAGCGGCGAATAAGGGCGCGCGTGCCGGTGGTGGCCGCTCGGT
TGGGTGTACGATTGAATTGCCATTTGAAACCGGCGCCAATCCTTTTGTTGATCTCGAAGTGCGTTTTCGCTATTTCTTCA
TTCGCAAAATCATGTTTGTTAAGTATGCCCAGGCATTTGTGATCTTTCCCGGTGGTTTTGGTACCCTTGACGAGTTGTTT
GAAGCGTTAACGCTCATTCAAACCGGAAAAATTCACGACTTTCCGGTTATTCTGTACGGCTCCGATTTCTGGCAGGGGAT
GCTTGATTGGGCACGCAATACCCTGCTTGCCCATGGCACGATTGCCCAAACTGATATTGATCGGTTACTGATCTGCGATG
ACCCTCAACAGATTTGTGCGCATGTTGTGCAGTCGTACCAGCATCGACACGGTAAGCGAGGAACTGAACCGTGGACACAC
TAA

Upstream 100 bases:

>100_bases
CTCGATGCGGCCACCATCGCTTGGGCGAGTCATCACTCCTCCTGAATTTGTAGTATCCTATGGGCAGTGTTGCCCATCAA
TTTGCGGAGTATACCATACC

Downstream 100 bases:

>100_bases
TCTGGCCGGCCAGTGCTGAGCTGTGTGCGCTGTTGCTTCGCTACTATCGGGGGGAAGCGGGGCTATGGGGCGAGATTATG
GCCTGTGTTGATCAAGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSRQTEDERLLHTDPYRQVHDFTHTDTWRVLRIMGEFVEGFENMAGLGPAVSIFGSARIPPASPIYAAATETARLLAQAG
FTIITGGGPGLMEAANKGARAGGGRSVGCTIELPFETGANPFVDLEVRFRYFFIRKIMFVKYAQAFVIFPGGFGTLDELF
EALTLIQTGKIHDFPVILYGSDFWQGMLDWARNTLLAHGTIAQTDIDRLLICDDPQQICAHVVQSYQHRHGKRGTEPWTH

Sequences:

>Translated_240_residues
MSRQTEDERLLHTDPYRQVHDFTHTDTWRVLRIMGEFVEGFENMAGLGPAVSIFGSARIPPASPIYAAATETARLLAQAG
FTIITGGGPGLMEAANKGARAGGGRSVGCTIELPFETGANPFVDLEVRFRYFFIRKIMFVKYAQAFVIFPGGFGTLDELF
EALTLIQTGKIHDFPVILYGSDFWQGMLDWARNTLLAHGTIAQTDIDRLLICDDPQQICAHVVQSYQHRHGKRGTEPWTH
>Mature_239_residues
SRQTEDERLLHTDPYRQVHDFTHTDTWRVLRIMGEFVEGFENMAGLGPAVSIFGSARIPPASPIYAAATETARLLAQAGF
TIITGGGPGLMEAANKGARAGGGRSVGCTIELPFETGANPFVDLEVRFRYFFIRKIMFVKYAQAFVIFPGGFGTLDELFE
ALTLIQTGKIHDFPVILYGSDFWQGMLDWARNTLLAHGTIAQTDIDRLLICDDPQQICAHVVQSYQHRHGKRGTEPWTH

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26705; Mature: 26574

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQTEDERLLHTDPYRQVHDFTHTDTWRVLRIMGEFVEGFENMAGLGPAVSIFGSARIP
CCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC
PASPIYAAATETARLLAQAGFTIITGGGPGLMEAANKGARAGGGRSVGCTIELPFETGAN
CCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCC
PFVDLEVRFRYFFIRKIMFVKYAQAFVIFPGGFGTLDELFEALTLIQTGKIHDFPVILYG
CEEEEEHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEC
SDFWQGMLDWARNTLLAHGTIAQTDIDRLLICDDPQQICAHVVQSYQHRHGKRGTEPWTH
CHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SRQTEDERLLHTDPYRQVHDFTHTDTWRVLRIMGEFVEGFENMAGLGPAVSIFGSARIP
CCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC
PASPIYAAATETARLLAQAGFTIITGGGPGLMEAANKGARAGGGRSVGCTIELPFETGAN
CCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCC
PFVDLEVRFRYFFIRKIMFVKYAQAFVIFPGGFGTLDELFEALTLIQTGKIHDFPVILYG
CEEEEEHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEC
SDFWQGMLDWARNTLLAHGTIAQTDIDRLLICDDPQQICAHVVQSYQHRHGKRGTEPWTH
CHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA