| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525726
Identifier: 222525726
GI number: 222525726
Start: 3123156
End: 3123677
Strand: Direct
Name: 222525726
Synonym: Chy400_2477
Alternate gene names: NA
Gene position: 3123156-3123677 (Clockwise)
Preceding gene: 222525725
Following gene: 222525727
Centisome position: 59.27
GC content: 46.17
Gene sequence:
>522_bases ATGCGCTTTATTTTTGACACCTCTGTGCTCATTGATTACTTGCGGGATGACAGGCCAGGTGATCAGGAAGTAGCTGCTGA TGCTTTTGCACTCGCATCTCAACAGGGTCATACCTTTCTTACGTTAGTCAGCCTAATGGAATTGTACAGTCCGATACTGC AAGAAACGAGTACAGATGGAGTTGAGGAAGAGGAGTCGCTTATGACAAGAACAAGAGGAAAGGAAGCTATTGAACGCGAT CTTTCGAGAGTCAAAAAGTTACTTGAAACCTATGGTATCCGACTTATTCATTGTTCAAGGAGGGCGCAAGAGGTTGCTCT TGATATTTTGCGAGATCACCGATCTCCGTTGGGTAAAAATGCTCTAACCGATAGCTTGATCATTGCGAATGGCCTTGTTC GCAGGGCATACCTGGTCACGAGAGATCGTAAGTGGAGTCAGGTTGCACGAGGGCTTCAGCAGAGAAAGCCATGCGCTTTA AGAGTGGTATCTCCGGTAGATCTGATTCAAGGGAGGTTGTAA
Upstream 100 bases:
>100_bases AACGCCTCCAGATAGAAGAATGTAGTACTGTGCTAGGTTATGTGGCGTGGTGGCTCCGAATCAAGACTCTACGAGGTTCA TTGCGGTCGGAGTAGAGAGT
Downstream 100 bases:
>100_bases AAATGTCAAAAAAACTCCTCATCGCCACGCTAGGCACTGCCCCGGCAGTGATCACCGAAGCTATCGAACTGCTAGAAGAG CAGAGTCTTCATCCAGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MRFIFDTSVLIDYLRDDRPGDQEVAADAFALASQQGHTFLTLVSLMELYSPILQETSTDGVEEEESLMTRTRGKEAIERD LSRVKKLLETYGIRLIHCSRRAQEVALDILRDHRSPLGKNALTDSLIIANGLVRRAYLVTRDRKWSQVARGLQQRKPCAL RVVSPVDLIQGRL
Sequences:
>Translated_173_residues MRFIFDTSVLIDYLRDDRPGDQEVAADAFALASQQGHTFLTLVSLMELYSPILQETSTDGVEEEESLMTRTRGKEAIERD LSRVKKLLETYGIRLIHCSRRAQEVALDILRDHRSPLGKNALTDSLIIANGLVRRAYLVTRDRKWSQVARGLQQRKPCAL RVVSPVDLIQGRL >Mature_173_residues MRFIFDTSVLIDYLRDDRPGDQEVAADAFALASQQGHTFLTLVSLMELYSPILQETSTDGVEEEESLMTRTRGKEAIERD LSRVKKLLETYGIRLIHCSRRAQEVALDILRDHRSPLGKNALTDSLIIANGLVRRAYLVTRDRKWSQVARGLQQRKPCAL RVVSPVDLIQGRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19664; Mature: 19664
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFIFDTSVLIDYLRDDRPGDQEVAADAFALASQQGHTFLTLVSLMELYSPILQETSTDG CCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC VEEEESLMTRTRGKEAIERDLSRVKKLLETYGIRLIHCSRRAQEVALDILRDHRSPLGKN CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCCCCCH ALTDSLIIANGLVRRAYLVTRDRKWSQVARGLQQRKPCALRVVSPVDLIQGRL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCHHHHHCCCC >Mature Secondary Structure MRFIFDTSVLIDYLRDDRPGDQEVAADAFALASQQGHTFLTLVSLMELYSPILQETSTDG CCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC VEEEESLMTRTRGKEAIERDLSRVKKLLETYGIRLIHCSRRAQEVALDILRDHRSPLGKN CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCCCCCH ALTDSLIIANGLVRRAYLVTRDRKWSQVARGLQQRKPCALRVVSPVDLIQGRL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA