| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525727
Identifier: 222525727
GI number: 222525727
Start: 3123680
End: 3124687
Strand: Direct
Name: 222525727
Synonym: Chy400_2478
Alternate gene names: NA
Gene position: 3123680-3124687 (Clockwise)
Preceding gene: 222525726
Following gene: 222525728
Centisome position: 59.28
GC content: 50.89
Gene sequence:
>1008_bases ATGTCAAAAAAACTCCTCATCGCCACGCTAGGCACTGCCCCGGCAGTGATCACCGAAGCTATCGAACTGCTAGAAGAGCA GAGTCTTCATCCAGACGGAGTAGTGTTGCTCTACACCGAGGACTATGATGTACTCAGTTCACTGGAATTGCTAATGAAAC ATCTTCCAGCACACTGTGAAATCAGTTGGATCGTACCGATTTCTGTCGGAACATACCACGATATTGACTCTACCAAGGCG GCAGTGGAGTTCATGCAGATAGCCTGCACTCAGTTGCGCACCTACCGAAACAATCATCGGTTGTTTGTGAGTATCGCCGG CGGGCGGAAAGTAATGTCAGCACTGCTGGCTTTGGCCGTCCAGTTTTATGGTGCCGAGTGTCTATTTCATATCTGGGTAC CTCCCTGGTTGGAAGAGGAAGGGGAAATTGGACAACTGCGAGGCCTACAGCCCGAGCAGATCAATGCACGACTTCATCCC CCCCTTGTTAATCGCGATCCTAAAGATCGTCCTCAACTGGTGGATCTACCTTTCATTGCCCTGTTTCCTATGCTTCCCGA CATTCGCGAGGCGCTGGCTGGAGGAACACCTATCGATAAAAATGTGAAATCCATGCTCGTTTCTACTGGCCTGTTGACAA CAGATGGCACGCCTACACCGCTTGGTGAAAGTGTGGCAGCAATTCTGAACTTGGTAGAGGCCTTGCCCCCAGCACGGCAG ATAGAACCCAAAGTTCACATTTCATCTCATCATTACAAAGATCGGATAGAAGGTTTTGCCAAAGAACTGATAGGCTACGC GCCGTTTGTGGTAGAGGTTCGCGGGGAACAATGGGGTCAGGGTGAGCCTGGCGTTAGCGCACAACAACCGCGAGATCTTA TTGTCCGTGCACGCCTTGGTACCGACATTCGCTTTCAATTGCGTCTGGTGACCACAGCTACAACAGAAGGTGAACTGGAA GCAGCACGTCGCCACGTGGAACGGTATGTGCAACGGAAGGAAAGATAA
Upstream 100 bases:
>100_bases ATCGTAAGTGGAGTCAGGTTGCACGAGGGCTTCAGCAGAGAAAGCCATGCGCTTTAAGAGTGGTATCTCCGGTAGATCTG ATTCAAGGGAGGTTGTAAAA
Downstream 100 bases:
>100_bases TTCGTTTTGCCCCAGAGGACTGGCGGCTAAGACTGTCAAAGAGGAGTTTTTCTATGCCTTTAGCATTGATCCTACTGATA GGCGAACAGCCAGCGGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSKKLLIATLGTAPAVITEAIELLEEQSLHPDGVVLLYTEDYDVLSSLELLMKHLPAHCEISWIVPISVGTYHDIDSTKA AVEFMQIACTQLRTYRNNHRLFVSIAGGRKVMSALLALAVQFYGAECLFHIWVPPWLEEEGEIGQLRGLQPEQINARLHP PLVNRDPKDRPQLVDLPFIALFPMLPDIREALAGGTPIDKNVKSMLVSTGLLTTDGTPTPLGESVAAILNLVEALPPARQ IEPKVHISSHHYKDRIEGFAKELIGYAPFVVEVRGEQWGQGEPGVSAQQPRDLIVRARLGTDIRFQLRLVTTATTEGELE AARRHVERYVQRKER
Sequences:
>Translated_335_residues MSKKLLIATLGTAPAVITEAIELLEEQSLHPDGVVLLYTEDYDVLSSLELLMKHLPAHCEISWIVPISVGTYHDIDSTKA AVEFMQIACTQLRTYRNNHRLFVSIAGGRKVMSALLALAVQFYGAECLFHIWVPPWLEEEGEIGQLRGLQPEQINARLHP PLVNRDPKDRPQLVDLPFIALFPMLPDIREALAGGTPIDKNVKSMLVSTGLLTTDGTPTPLGESVAAILNLVEALPPARQ IEPKVHISSHHYKDRIEGFAKELIGYAPFVVEVRGEQWGQGEPGVSAQQPRDLIVRARLGTDIRFQLRLVTTATTEGELE AARRHVERYVQRKER >Mature_334_residues SKKLLIATLGTAPAVITEAIELLEEQSLHPDGVVLLYTEDYDVLSSLELLMKHLPAHCEISWIVPISVGTYHDIDSTKAA VEFMQIACTQLRTYRNNHRLFVSIAGGRKVMSALLALAVQFYGAECLFHIWVPPWLEEEGEIGQLRGLQPEQINARLHPP LVNRDPKDRPQLVDLPFIALFPMLPDIREALAGGTPIDKNVKSMLVSTGLLTTDGTPTPLGESVAAILNLVEALPPARQI EPKVHISSHHYKDRIEGFAKELIGYAPFVVEVRGEQWGQGEPGVSAQQPRDLIVRARLGTDIRFQLRLVTTATTEGELEA ARRHVERYVQRKER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37332; Mature: 37200
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKLLIATLGTAPAVITEAIELLEEQSLHPDGVVLLYTEDYDVLSSLELLMKHLPAHCE CCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCE ISWIVPISVGTYHDIDSTKAAVEFMQIACTQLRTYRNNHRLFVSIAGGRKVMSALLALAV EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH QFYGAECLFHIWVPPWLEEEGEIGQLRGLQPEQINARLHPPLVNRDPKDRPQLVDLPFIA HHHCCCEEEEECCCCCCCCCCCCHHHCCCCHHHCCCEECCCCCCCCCCCCCCEECCCHHH LFPMLPDIREALAGGTPIDKNVKSMLVSTGLLTTDGTPTPLGESVAAILNLVEALPPARQ HHHCCHHHHHHHCCCCCCCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHCCCCHH IEPKVHISSHHYKDRIEGFAKELIGYAPFVVEVRGEQWGQGEPGVSAQQPRDLIVRARLG CCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHEEEEECC TDIRFQLRLVTTATTEGELEAARRHVERYVQRKER CCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKKLLIATLGTAPAVITEAIELLEEQSLHPDGVVLLYTEDYDVLSSLELLMKHLPAHCE CCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCE ISWIVPISVGTYHDIDSTKAAVEFMQIACTQLRTYRNNHRLFVSIAGGRKVMSALLALAV EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH QFYGAECLFHIWVPPWLEEEGEIGQLRGLQPEQINARLHPPLVNRDPKDRPQLVDLPFIA HHHCCCEEEEECCCCCCCCCCCCHHHCCCCHHHCCCEECCCCCCCCCCCCCCEECCCHHH LFPMLPDIREALAGGTPIDKNVKSMLVSTGLLTTDGTPTPLGESVAAILNLVEALPPARQ HHHCCHHHHHHHCCCCCCCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHCCCCHH IEPKVHISSHHYKDRIEGFAKELIGYAPFVVEVRGEQWGQGEPGVSAQQPRDLIVRARLG CCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHEEEEECC TDIRFQLRLVTTATTEGELEAARRHVERYVQRKER CCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA