Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222525727

Identifier: 222525727

GI number: 222525727

Start: 3123680

End: 3124687

Strand: Direct

Name: 222525727

Synonym: Chy400_2478

Alternate gene names: NA

Gene position: 3123680-3124687 (Clockwise)

Preceding gene: 222525726

Following gene: 222525728

Centisome position: 59.28

GC content: 50.89

Gene sequence:

>1008_bases
ATGTCAAAAAAACTCCTCATCGCCACGCTAGGCACTGCCCCGGCAGTGATCACCGAAGCTATCGAACTGCTAGAAGAGCA
GAGTCTTCATCCAGACGGAGTAGTGTTGCTCTACACCGAGGACTATGATGTACTCAGTTCACTGGAATTGCTAATGAAAC
ATCTTCCAGCACACTGTGAAATCAGTTGGATCGTACCGATTTCTGTCGGAACATACCACGATATTGACTCTACCAAGGCG
GCAGTGGAGTTCATGCAGATAGCCTGCACTCAGTTGCGCACCTACCGAAACAATCATCGGTTGTTTGTGAGTATCGCCGG
CGGGCGGAAAGTAATGTCAGCACTGCTGGCTTTGGCCGTCCAGTTTTATGGTGCCGAGTGTCTATTTCATATCTGGGTAC
CTCCCTGGTTGGAAGAGGAAGGGGAAATTGGACAACTGCGAGGCCTACAGCCCGAGCAGATCAATGCACGACTTCATCCC
CCCCTTGTTAATCGCGATCCTAAAGATCGTCCTCAACTGGTGGATCTACCTTTCATTGCCCTGTTTCCTATGCTTCCCGA
CATTCGCGAGGCGCTGGCTGGAGGAACACCTATCGATAAAAATGTGAAATCCATGCTCGTTTCTACTGGCCTGTTGACAA
CAGATGGCACGCCTACACCGCTTGGTGAAAGTGTGGCAGCAATTCTGAACTTGGTAGAGGCCTTGCCCCCAGCACGGCAG
ATAGAACCCAAAGTTCACATTTCATCTCATCATTACAAAGATCGGATAGAAGGTTTTGCCAAAGAACTGATAGGCTACGC
GCCGTTTGTGGTAGAGGTTCGCGGGGAACAATGGGGTCAGGGTGAGCCTGGCGTTAGCGCACAACAACCGCGAGATCTTA
TTGTCCGTGCACGCCTTGGTACCGACATTCGCTTTCAATTGCGTCTGGTGACCACAGCTACAACAGAAGGTGAACTGGAA
GCAGCACGTCGCCACGTGGAACGGTATGTGCAACGGAAGGAAAGATAA

Upstream 100 bases:

>100_bases
ATCGTAAGTGGAGTCAGGTTGCACGAGGGCTTCAGCAGAGAAAGCCATGCGCTTTAAGAGTGGTATCTCCGGTAGATCTG
ATTCAAGGGAGGTTGTAAAA

Downstream 100 bases:

>100_bases
TTCGTTTTGCCCCAGAGGACTGGCGGCTAAGACTGTCAAAGAGGAGTTTTTCTATGCCTTTAGCATTGATCCTACTGATA
GGCGAACAGCCAGCGGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSKKLLIATLGTAPAVITEAIELLEEQSLHPDGVVLLYTEDYDVLSSLELLMKHLPAHCEISWIVPISVGTYHDIDSTKA
AVEFMQIACTQLRTYRNNHRLFVSIAGGRKVMSALLALAVQFYGAECLFHIWVPPWLEEEGEIGQLRGLQPEQINARLHP
PLVNRDPKDRPQLVDLPFIALFPMLPDIREALAGGTPIDKNVKSMLVSTGLLTTDGTPTPLGESVAAILNLVEALPPARQ
IEPKVHISSHHYKDRIEGFAKELIGYAPFVVEVRGEQWGQGEPGVSAQQPRDLIVRARLGTDIRFQLRLVTTATTEGELE
AARRHVERYVQRKER

Sequences:

>Translated_335_residues
MSKKLLIATLGTAPAVITEAIELLEEQSLHPDGVVLLYTEDYDVLSSLELLMKHLPAHCEISWIVPISVGTYHDIDSTKA
AVEFMQIACTQLRTYRNNHRLFVSIAGGRKVMSALLALAVQFYGAECLFHIWVPPWLEEEGEIGQLRGLQPEQINARLHP
PLVNRDPKDRPQLVDLPFIALFPMLPDIREALAGGTPIDKNVKSMLVSTGLLTTDGTPTPLGESVAAILNLVEALPPARQ
IEPKVHISSHHYKDRIEGFAKELIGYAPFVVEVRGEQWGQGEPGVSAQQPRDLIVRARLGTDIRFQLRLVTTATTEGELE
AARRHVERYVQRKER
>Mature_334_residues
SKKLLIATLGTAPAVITEAIELLEEQSLHPDGVVLLYTEDYDVLSSLELLMKHLPAHCEISWIVPISVGTYHDIDSTKAA
VEFMQIACTQLRTYRNNHRLFVSIAGGRKVMSALLALAVQFYGAECLFHIWVPPWLEEEGEIGQLRGLQPEQINARLHPP
LVNRDPKDRPQLVDLPFIALFPMLPDIREALAGGTPIDKNVKSMLVSTGLLTTDGTPTPLGESVAAILNLVEALPPARQI
EPKVHISSHHYKDRIEGFAKELIGYAPFVVEVRGEQWGQGEPGVSAQQPRDLIVRARLGTDIRFQLRLVTTATTEGELEA
ARRHVERYVQRKER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37332; Mature: 37200

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKLLIATLGTAPAVITEAIELLEEQSLHPDGVVLLYTEDYDVLSSLELLMKHLPAHCE
CCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCE
ISWIVPISVGTYHDIDSTKAAVEFMQIACTQLRTYRNNHRLFVSIAGGRKVMSALLALAV
EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH
QFYGAECLFHIWVPPWLEEEGEIGQLRGLQPEQINARLHPPLVNRDPKDRPQLVDLPFIA
HHHCCCEEEEECCCCCCCCCCCCHHHCCCCHHHCCCEECCCCCCCCCCCCCCEECCCHHH
LFPMLPDIREALAGGTPIDKNVKSMLVSTGLLTTDGTPTPLGESVAAILNLVEALPPARQ
HHHCCHHHHHHHCCCCCCCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHCCCCHH
IEPKVHISSHHYKDRIEGFAKELIGYAPFVVEVRGEQWGQGEPGVSAQQPRDLIVRARLG
CCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHEEEEECC
TDIRFQLRLVTTATTEGELEAARRHVERYVQRKER
CCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKKLLIATLGTAPAVITEAIELLEEQSLHPDGVVLLYTEDYDVLSSLELLMKHLPAHCE
CCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCE
ISWIVPISVGTYHDIDSTKAAVEFMQIACTQLRTYRNNHRLFVSIAGGRKVMSALLALAV
EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH
QFYGAECLFHIWVPPWLEEEGEIGQLRGLQPEQINARLHPPLVNRDPKDRPQLVDLPFIA
HHHCCCEEEEECCCCCCCCCCCCHHHCCCCHHHCCCEECCCCCCCCCCCCCCEECCCHHH
LFPMLPDIREALAGGTPIDKNVKSMLVSTGLLTTDGTPTPLGESVAAILNLVEALPPARQ
HHHCCHHHHHHHCCCCCCCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHCCCCHH
IEPKVHISSHHYKDRIEGFAKELIGYAPFVVEVRGEQWGQGEPGVSAQQPRDLIVRARLG
CCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHEEEEECC
TDIRFQLRLVTTATTEGELEAARRHVERYVQRKER
CCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA