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The map label for this gene is rhaA [H]

Identifier: 222525710

GI number: 222525710

Start: 3106014

End: 3107297

Strand: Reverse

Name: rhaA [H]

Synonym: Chy400_2461

Alternate gene names: 222525710

Gene position: 3107297-3106014 (Counterclockwise)

Preceding gene: 222525711

Following gene: 222525709

Centisome position: 58.97

GC content: 57.32

Gene sequence:

>1284_bases
ATGACCTTTACTGCTCCGACGCCGGCGCAGATTGAAGCAGCGTACACTGTAGCACGTGAACGTTACGCGGCCCTCGGTGT
TGATACTGAAGCGGCAATGACAACCCTGGCCACTGTCAGCCTGAGCCTTCACTGCTGGCAAGGCGACGATGTAGGCGGCT
TTGAAAATCCCGGTGGCCCGCTAGAGGGTGGCATCGCGGCAACCGGAAACTATCCCGGCAAAGCCCGCAACGGCGATGAA
TTACGCAGTGATCTCGATCTGGTCTATCGCCTCTTACCCGGTCGGCACCGGCTCAACCTGCACGCCATCTACGCGGAAAC
CGGTGGGGTTAAGGTGAGTCGGGACGAGCTGCGCCCTGAACACTTCGCCACCTGGCTGGATTGGGCAAAAGCAAACGGTC
ATGGGATCGATTTCAACCCGACCTGCTTTTCACATCCACTGGCAGCGGATGGGATGACGCTGGCCCATCCCGATCCGGCG
ATTCGCCGGTTTTGGATCGATCACTGTATCGCCTGCCGGCGAATTGGGGCACACTTTGGGCGCGAGCTGGGAACACCGTG
CGTCACCAATATCTGGATACCCGATGGCATGAAAGATAATCCGGTTGACCGGTTAGGGCCACGGCAGCGCTTGCGTGAAT
CGCTGGACGCCATTCTGGCCGAGCCGCTCGATCCGGCGCATAACCGCGATGCCGTTGAAGCCAAGCTCTTTGGCATCGGT
TCTGAGAGCTATGTCGTTGGCTCACACGAGTTCTACCTAGGGTATGCGGTGAGTCATCCAGGACTGCTGATCTGCCTTGA
TAGTGGCCATTTTCATCCGACCGAAGTGATTTCCGATAAGATTTCGGCAGTCTTACTGTTTGTTGATGAACTCCTGTTAC
ACGTCAGTCGCGGTGTGCGTTGGGACAGTGATCACGTAGTCACACTTTCAGATGAAACCCAGGCGATGATGCAGGAAGTG
GTGCGTGGTGGGTTTCTGTCACGCACGCATATCGGCCTCGATTTCTTCGACGCCAGTATCAATCGGGTAGCGGCCTGGAC
AATCGGCGCCCGGAATGTTCTGCGGGCGTTACTGATCGCCTTGCTTGAACCTACGGGACGGCTCCGCGAACTGGAACTGG
CGGGTGATACAACTGCCCGTCTTGCCATCCTCGAAGAACTCAAGGGAATGCCGTGGCAGGCGGTCTGGGACATGTACTGT
TACCGTCACGACGTTCCGATAGGGATCGCGTTTCTCAACGAGATCCGTCACTATGAAGCAGCAGTCCTGGCGATGCGTAG
CTAG

Upstream 100 bases:

>100_bases
GTTGTCCGCAATAGATAGGGCAGCGTCACTAGCGCGGCCCGGATATAACGAGAGATTGATACCGGACGACAGGCCGGTTA
TCCGGCACAGGAGGAAACGT

Downstream 100 bases:

>100_bases
TCGTTGCGACAAACAAGGTCTCTTCGTCAGACAGGGAGTTTCCTGATGAACACAGATAACACTCGGTTTCGCCATGTCAA
GTATGGGTGGGATGCAGCCT

Product: L-rhamnose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MTFTAPTPAQIEAAYTVARERYAALGVDTEAAMTTLATVSLSLHCWQGDDVGGFENPGGPLEGGIAATGNYPGKARNGDE
LRSDLDLVYRLLPGRHRLNLHAIYAETGGVKVSRDELRPEHFATWLDWAKANGHGIDFNPTCFSHPLAADGMTLAHPDPA
IRRFWIDHCIACRRIGAHFGRELGTPCVTNIWIPDGMKDNPVDRLGPRQRLRESLDAILAEPLDPAHNRDAVEAKLFGIG
SESYVVGSHEFYLGYAVSHPGLLICLDSGHFHPTEVISDKISAVLLFVDELLLHVSRGVRWDSDHVVTLSDETQAMMQEV
VRGGFLSRTHIGLDFFDASINRVAAWTIGARNVLRALLIALLEPTGRLRELELAGDTTARLAILEELKGMPWQAVWDMYC
YRHDVPIGIAFLNEIRHYEAAVLAMRS

Sequences:

>Translated_427_residues
MTFTAPTPAQIEAAYTVARERYAALGVDTEAAMTTLATVSLSLHCWQGDDVGGFENPGGPLEGGIAATGNYPGKARNGDE
LRSDLDLVYRLLPGRHRLNLHAIYAETGGVKVSRDELRPEHFATWLDWAKANGHGIDFNPTCFSHPLAADGMTLAHPDPA
IRRFWIDHCIACRRIGAHFGRELGTPCVTNIWIPDGMKDNPVDRLGPRQRLRESLDAILAEPLDPAHNRDAVEAKLFGIG
SESYVVGSHEFYLGYAVSHPGLLICLDSGHFHPTEVISDKISAVLLFVDELLLHVSRGVRWDSDHVVTLSDETQAMMQEV
VRGGFLSRTHIGLDFFDASINRVAAWTIGARNVLRALLIALLEPTGRLRELELAGDTTARLAILEELKGMPWQAVWDMYC
YRHDVPIGIAFLNEIRHYEAAVLAMRS
>Mature_426_residues
TFTAPTPAQIEAAYTVARERYAALGVDTEAAMTTLATVSLSLHCWQGDDVGGFENPGGPLEGGIAATGNYPGKARNGDEL
RSDLDLVYRLLPGRHRLNLHAIYAETGGVKVSRDELRPEHFATWLDWAKANGHGIDFNPTCFSHPLAADGMTLAHPDPAI
RRFWIDHCIACRRIGAHFGRELGTPCVTNIWIPDGMKDNPVDRLGPRQRLRESLDAILAEPLDPAHNRDAVEAKLFGIGS
ESYVVGSHEFYLGYAVSHPGLLICLDSGHFHPTEVISDKISAVLLFVDELLLHVSRGVRWDSDHVVTLSDETQAMMQEVV
RGGFLSRTHIGLDFFDASINRVAAWTIGARNVLRALLIALLEPTGRLRELELAGDTTARLAILEELKGMPWQAVWDMYCY
RHDVPIGIAFLNEIRHYEAAVLAMRS

Specific function: Metabolism of L-rhamnose; first step. [C]

COG id: COG4806

COG function: function code G; L-rhamnose isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnose isomerase family [H]

Homologues:

Organism=Escherichia coli, GI48994990, Length=417, Percent_Identity=65.2278177458034, Blast_Score=582, Evalue=1e-167,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009308
- InterPro:   IPR013022 [H]

Pfam domain/function: PF06134 RhaA [H]

EC number: =5.3.1.14 [H]

Molecular weight: Translated: 47141; Mature: 47010

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTAPTPAQIEAAYTVARERYAALGVDTEAAMTTLATVSLSLHCWQGDDVGGFENPGGP
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCC
LEGGIAATGNYPGKARNGDELRSDLDLVYRLLPGRHRLNLHAIYAETGGVKVSRDELRPE
CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEHHHCCHH
HFATWLDWAKANGHGIDFNPTCFSHPLAADGMTLAHPDPAIRRFWIDHCIACRRIGAHFG
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
RELGTPCVTNIWIPDGMKDNPVDRLGPRQRLRESLDAILAEPLDPAHNRDAVEAKLFGIG
HHHCCCCEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
SESYVVGSHEFYLGYAVSHPGLLICLDSGHFHPTEVISDKISAVLLFVDELLLHVSRGVR
CCCEEEECCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WDSDHVVTLSDETQAMMQEVVRGGFLSRTHIGLDFFDASINRVAAWTIGARNVLRALLIA
CCCCCEEEECCHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCEEEEECCHHHHHHHHHHH
LLEPTGRLRELELAGDTTARLAILEELKGMPWQAVWDMYCYRHDVPIGIAFLNEIRHYEA
HHCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AVLAMRS
HHHEECC
>Mature Secondary Structure 
TFTAPTPAQIEAAYTVARERYAALGVDTEAAMTTLATVSLSLHCWQGDDVGGFENPGGP
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCC
LEGGIAATGNYPGKARNGDELRSDLDLVYRLLPGRHRLNLHAIYAETGGVKVSRDELRPE
CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEHHHCCHH
HFATWLDWAKANGHGIDFNPTCFSHPLAADGMTLAHPDPAIRRFWIDHCIACRRIGAHFG
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
RELGTPCVTNIWIPDGMKDNPVDRLGPRQRLRESLDAILAEPLDPAHNRDAVEAKLFGIG
HHHCCCCEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
SESYVVGSHEFYLGYAVSHPGLLICLDSGHFHPTEVISDKISAVLLFVDELLLHVSRGVR
CCCEEEECCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WDSDHVVTLSDETQAMMQEVVRGGFLSRTHIGLDFFDASINRVAAWTIGARNVLRALLIA
CCCCCEEEECCHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCEEEEECCHHHHHHHHHHH
LLEPTGRLRELELAGDTTARLAILEELKGMPWQAVWDMYCYRHDVPIGIAFLNEIRHYEA
HHCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AVLAMRS
HHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA