Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is yuxG [H]

Identifier: 222525709

GI number: 222525709

Start: 3103776

End: 3105968

Strand: Reverse

Name: yuxG [H]

Synonym: Chy400_2460

Alternate gene names: 222525709

Gene position: 3105968-3103776 (Counterclockwise)

Preceding gene: 222525710

Following gene: 222525708

Centisome position: 58.95

GC content: 57.46

Gene sequence:

>2193_bases
ATGAACACAGATAACACTCGGTTTCGCCATGTCAAGTATGGGTGGGATGCAGCCTATGCAGCGACACTCGATCCGGTAGC
ACGTCTGGTATACCGCTCGAATCTGTTAGGGAGTGATCAGCGGATTACGAATACCGGCGGCGGAAACACATCGGCTAAGA
TCACCGAGCGTGATCCACTCACGGCAGCGCCGGTCGAGGTGTTGTGGGTGAAAGGTTCAGGTGGTGATTTGCGCACCAGC
ACCCGCGCCAATTTTGCTTCACTCGAACTACGCAAATTACGCGAATTGCGCACGATGTATCTGCGCGATCCGGCTCGCGG
CCCGAAGACTGCCATCGAGGATGCGATGGTTGATCTCTACCCGCACTGCACCTTCAATCTCAACCCACGGGCGTCATCCA
TTGATACACCGCTCCATGCGTTCATTCCCTACCGTCACGTCGATCACATGCATCCGAATGCGGTGATCGCCATCGCTGCT
TCACGCAACGGCGAGCGATTGACGCGCGAGATTTACGGTGATGAGGTTATCTGGATGCCTTGGCAACGTCCGGGTTTTGA
TCTCGGTCTGAAGCTGGAGCAGATTTGTCGTGAGCATCCGCAGGCGAAGGGGGTCATTCTCGGCGGGCACGGATTGATCA
ATTGGGCCGATGATGATCAGGAATGCTATGAGCGGACGCTTGATCTGATCGAGCGTGCAGCACGATACATCGAAGCCCAT
GATCGTGGCGAGGCAACGTTTGGTGGTGCGCGCTATGATGCACTCCCATTTGAACAACGCCGCTCAGTTCTGGCGGCCAT
CTTACCCTGGCTGCGAGGGCAGATCAGCCAGCAACGACGCTTCATCGCCACCATTCAGGACGATGCGACCACGCTCCGCT
TTGTCAATAGTGTCGATGCACCTCGCCTGGCCGAATTGGGCACCAGTTGTCCTGATCATTTTCTGCGGACGAAGATTAAG
CCGCTTTACATTGACTGGCATCCCCAGGCGGAAACGCTCGACGATTTACAGCGCAAACTGGCCGTAGGACTTGAACGCTA
TCGCGCCGATTACACCCACTACTACGAAACCCACCGCCGTCCCGACTCACCACCGATGCGCGATCCGAATCCAAGCGTGA
TTCTCATTCCGGGACTGGGGATGATCGCCTGGGGCAAAGACAAGAGCGAGTCGCGGGTGACGGCAGAGTTTTATACGGCA
GCGATAGAGGTGATGCGCGGTGCTGAAGCGATTGACGAATACACTGCACTACCGCTACAAGAAGCCTTTGATATCGAGTA
CTGGCAGCTTGAAGAGGCCAAACTGCGACGAATGCCGCCGGAGAAGGAGCTGGCCCGTCAGGTGATAGCTGTCGTCGGTG
GCGGGAGTGGCATCGGTCGTGAGGTGGCTTTACGGCTGGCTAACGAGGGTGCGCATATCGTTTGTGTGGATAAAGATGGA
GCAGCGGCGCAGGCAACGGCACAGGCGATCATTGATCGCCACGGGATGGGCATTGGGGTTGCCGGGAGTGATATTTCGGC
TTGCGGCCCGGCAATCGGGCTGGTGGCCGACATCACGGATCGCACCAGTGTGCGGACAATGCTCGAACAAGTTGTACTGG
CCTACGGCGGTCTGGACGCCGTAGCGGTGACTGCCGGTATCTTTGTCGCTCCCGATAGCGAAGGCCGCATTCGCGACGAA
CAATGGGCATTAACCTTTGCCATCAATGTCACCGGTCACTATCTGGTGGCCGATGAAGCTGCCCGTATCTGGCGTAAACA
GGGTTTACCGGCCAACCTCGTCTTGACAACATCGGTGAATGCAGTAGTTGCCAAGAAGGGATCGCTCGCCTACGATACCA
GCAAAGCCGCAGCCAATCATCTGATCCGTGAACTGGCTATCGAACTGGCACCGCTGGTGAGGGTCAACGGTGTAGCCCCG
GCGACTGTCGTGCAAGGAAGCGGCATGTTTCCGCGTGAGCGGGTGATCGCGTCATTGACCAAATACGGGATTCCGTTCAC
TGCCGACGAACCGACCGACGTGCTCACCGACAAACTGGCCCGTTTCTACGCTGAACGCTCACTGCTCAAGCGCCCAATCA
CGCCAGCCGACCAGGCCGAAGCCTTTTTCCTGCTCCTGAGCCAGCGGCTGAGTCAGACAACCGGCCAGATCATCACGGTT
GACGGCGGACTCCACGAAGCCTTCCTGCGTTGA

Upstream 100 bases:

>100_bases
GTTTCTCAACGAGATCCGTCACTATGAAGCAGCAGTCCTGGCGATGCGTAGCTAGTCGTTGCGACAAACAAGGTCTCTTC
GTCAGACAGGGAGTTTCCTG

Downstream 100 bases:

>100_bases
GGGGGCAACACCATGACAGAACTGGCACATTTTATTGCGATTGACATCGGTGCTTCGAGCGGGCGCGTCATTCTAGGGCG
TTGGGACGGCACACGCTTCA

Product: short chain dehydrogenase

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 730; Mature: 730

Protein sequence:

>730_residues
MNTDNTRFRHVKYGWDAAYAATLDPVARLVYRSNLLGSDQRITNTGGGNTSAKITERDPLTAAPVEVLWVKGSGGDLRTS
TRANFASLELRKLRELRTMYLRDPARGPKTAIEDAMVDLYPHCTFNLNPRASSIDTPLHAFIPYRHVDHMHPNAVIAIAA
SRNGERLTREIYGDEVIWMPWQRPGFDLGLKLEQICREHPQAKGVILGGHGLINWADDDQECYERTLDLIERAARYIEAH
DRGEATFGGARYDALPFEQRRSVLAAILPWLRGQISQQRRFIATIQDDATTLRFVNSVDAPRLAELGTSCPDHFLRTKIK
PLYIDWHPQAETLDDLQRKLAVGLERYRADYTHYYETHRRPDSPPMRDPNPSVILIPGLGMIAWGKDKSESRVTAEFYTA
AIEVMRGAEAIDEYTALPLQEAFDIEYWQLEEAKLRRMPPEKELARQVIAVVGGGSGIGREVALRLANEGAHIVCVDKDG
AAAQATAQAIIDRHGMGIGVAGSDISACGPAIGLVADITDRTSVRTMLEQVVLAYGGLDAVAVTAGIFVAPDSEGRIRDE
QWALTFAINVTGHYLVADEAARIWRKQGLPANLVLTTSVNAVVAKKGSLAYDTSKAAANHLIRELAIELAPLVRVNGVAP
ATVVQGSGMFPRERVIASLTKYGIPFTADEPTDVLTDKLARFYAERSLLKRPITPADQAEAFFLLLSQRLSQTTGQIITV
DGGLHEAFLR

Sequences:

>Translated_730_residues
MNTDNTRFRHVKYGWDAAYAATLDPVARLVYRSNLLGSDQRITNTGGGNTSAKITERDPLTAAPVEVLWVKGSGGDLRTS
TRANFASLELRKLRELRTMYLRDPARGPKTAIEDAMVDLYPHCTFNLNPRASSIDTPLHAFIPYRHVDHMHPNAVIAIAA
SRNGERLTREIYGDEVIWMPWQRPGFDLGLKLEQICREHPQAKGVILGGHGLINWADDDQECYERTLDLIERAARYIEAH
DRGEATFGGARYDALPFEQRRSVLAAILPWLRGQISQQRRFIATIQDDATTLRFVNSVDAPRLAELGTSCPDHFLRTKIK
PLYIDWHPQAETLDDLQRKLAVGLERYRADYTHYYETHRRPDSPPMRDPNPSVILIPGLGMIAWGKDKSESRVTAEFYTA
AIEVMRGAEAIDEYTALPLQEAFDIEYWQLEEAKLRRMPPEKELARQVIAVVGGGSGIGREVALRLANEGAHIVCVDKDG
AAAQATAQAIIDRHGMGIGVAGSDISACGPAIGLVADITDRTSVRTMLEQVVLAYGGLDAVAVTAGIFVAPDSEGRIRDE
QWALTFAINVTGHYLVADEAARIWRKQGLPANLVLTTSVNAVVAKKGSLAYDTSKAAANHLIRELAIELAPLVRVNGVAP
ATVVQGSGMFPRERVIASLTKYGIPFTADEPTDVLTDKLARFYAERSLLKRPITPADQAEAFFLLLSQRLSQTTGQIITV
DGGLHEAFLR
>Mature_730_residues
MNTDNTRFRHVKYGWDAAYAATLDPVARLVYRSNLLGSDQRITNTGGGNTSAKITERDPLTAAPVEVLWVKGSGGDLRTS
TRANFASLELRKLRELRTMYLRDPARGPKTAIEDAMVDLYPHCTFNLNPRASSIDTPLHAFIPYRHVDHMHPNAVIAIAA
SRNGERLTREIYGDEVIWMPWQRPGFDLGLKLEQICREHPQAKGVILGGHGLINWADDDQECYERTLDLIERAARYIEAH
DRGEATFGGARYDALPFEQRRSVLAAILPWLRGQISQQRRFIATIQDDATTLRFVNSVDAPRLAELGTSCPDHFLRTKIK
PLYIDWHPQAETLDDLQRKLAVGLERYRADYTHYYETHRRPDSPPMRDPNPSVILIPGLGMIAWGKDKSESRVTAEFYTA
AIEVMRGAEAIDEYTALPLQEAFDIEYWQLEEAKLRRMPPEKELARQVIAVVGGGSGIGREVALRLANEGAHIVCVDKDG
AAAQATAQAIIDRHGMGIGVAGSDISACGPAIGLVADITDRTSVRTMLEQVVLAYGGLDAVAVTAGIFVAPDSEGRIRDE
QWALTFAINVTGHYLVADEAARIWRKQGLPANLVLTTSVNAVVAKKGSLAYDTSKAAANHLIRELAIELAPLVRVNGVAP
ATVVQGSGMFPRERVIASLTKYGIPFTADEPTDVLTDKLARFYAERSLLKRPITPADQAEAFFLLLSQRLSQTTGQIITV
DGGLHEAFLR

Specific function: Unknown

COG id: COG3347

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=279, Percent_Identity=27.9569892473118, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI32483357, Length=281, Percent_Identity=27.4021352313167, Blast_Score=68, Evalue=3e-11,
Organism=Escherichia coli, GI1789378, Length=284, Percent_Identity=29.9295774647887, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1789057, Length=280, Percent_Identity=27.1428571428571, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=290, Percent_Identity=25.8620689655172, Blast_Score=66, Evalue=8e-11,
Organism=Drosophila melanogaster, GI21357041, Length=299, Percent_Identity=28.4280936454849, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28571526, Length=284, Percent_Identity=29.5774647887324, Blast_Score=68, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303
- InterPro:   IPR013454
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short; PF00596 Aldolase_II [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 80654; Mature: 80654

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTDNTRFRHVKYGWDAAYAATLDPVARLVYRSNLLGSDQRITNTGGGNTSAKITERDPL
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCCCC
TAAPVEVLWVKGSGGDLRTSTRANFASLELRKLRELRTMYLRDPARGPKTAIEDAMVDLY
CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
PHCTFNLNPRASSIDTPLHAFIPYRHVDHMHPNAVIAIAASRNGERLTREIYGDEVIWMP
CCEEEECCCCCCCCCCCHHHHCCHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCCEEEEC
WQRPGFDLGLKLEQICREHPQAKGVILGGHGLINWADDDQECYERTLDLIERAARYIEAH
CCCCCCCCCCCHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHC
DRGEATFGGARYDALPFEQRRSVLAAILPWLRGQISQQRRFIATIQDDATTLRFVNSVDA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCC
PRLAELGTSCPDHFLRTKIKPLYIDWHPQAETLDDLQRKLAVGLERYRADYTHYYETHRR
CHHHHHCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDSPPMRDPNPSVILIPGLGMIAWGKDKSESRVTAEFYTAAIEVMRGAEAIDEYTALPLQ
CCCCCCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EAFDIEYWQLEEAKLRRMPPEKELARQVIAVVGGGSGIGREVALRLANEGAHIVCVDKDG
HHHCCCCEEECHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCEEEEECCCC
AAAQATAQAIIDRHGMGIGVAGSDISACGPAIGLVADITDRTSVRTMLEQVVLAYGGLDA
CHHHHHHHHHHHHCCCEEEECCCCCHHCCCHHHHEECCCCHHHHHHHHHHHHHHHCCCHH
VAVTAGIFVAPDSEGRIRDEQWALTFAINVTGHYLVADEAARIWRKQGLPANLVLTTSVN
HHHHCEEEEECCCCCCCCCCEEEEEEEEECCCEEEEEHHHHHHHHHCCCCEEEEEEECCC
AVVAKKGSLAYDTSKAAANHLIRELAIELAPLVRVNGVAPATVVQGSGMFPRERVIASLT
EEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCHHHHHHHHHH
KYGIPFTADEPTDVLTDKLARFYAERSLLKRPITPADQAEAFFLLLSQRLSQTTGQIITV
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
DGGLHEAFLR
ECCHHHHHCC
>Mature Secondary Structure
MNTDNTRFRHVKYGWDAAYAATLDPVARLVYRSNLLGSDQRITNTGGGNTSAKITERDPL
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCCCC
TAAPVEVLWVKGSGGDLRTSTRANFASLELRKLRELRTMYLRDPARGPKTAIEDAMVDLY
CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
PHCTFNLNPRASSIDTPLHAFIPYRHVDHMHPNAVIAIAASRNGERLTREIYGDEVIWMP
CCEEEECCCCCCCCCCCHHHHCCHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCCEEEEC
WQRPGFDLGLKLEQICREHPQAKGVILGGHGLINWADDDQECYERTLDLIERAARYIEAH
CCCCCCCCCCCHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHC
DRGEATFGGARYDALPFEQRRSVLAAILPWLRGQISQQRRFIATIQDDATTLRFVNSVDA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCC
PRLAELGTSCPDHFLRTKIKPLYIDWHPQAETLDDLQRKLAVGLERYRADYTHYYETHRR
CHHHHHCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDSPPMRDPNPSVILIPGLGMIAWGKDKSESRVTAEFYTAAIEVMRGAEAIDEYTALPLQ
CCCCCCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EAFDIEYWQLEEAKLRRMPPEKELARQVIAVVGGGSGIGREVALRLANEGAHIVCVDKDG
HHHCCCCEEECHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCEEEEECCCC
AAAQATAQAIIDRHGMGIGVAGSDISACGPAIGLVADITDRTSVRTMLEQVVLAYGGLDA
CHHHHHHHHHHHHCCCEEEECCCCCHHCCCHHHHEECCCCHHHHHHHHHHHHHHHCCCHH
VAVTAGIFVAPDSEGRIRDEQWALTFAINVTGHYLVADEAARIWRKQGLPANLVLTTSVN
HHHHCEEEEECCCCCCCCCCEEEEEEEEECCCEEEEEHHHHHHHHHCCCCEEEEEEECCC
AVVAKKGSLAYDTSKAAANHLIRELAIELAPLVRVNGVAPATVVQGSGMFPRERVIASLT
EEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCHHHHHHHHHH
KYGIPFTADEPTDVLTDKLARFYAERSLLKRPITPADQAEAFFLLLSQRLSQTTGQIITV
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
DGGLHEAFLR
ECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377; 8188684 [H]