| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525701
Identifier: 222525701
GI number: 222525701
Start: 3095113
End: 3095988
Strand: Direct
Name: 222525701
Synonym: Chy400_2452
Alternate gene names: NA
Gene position: 3095113-3095988 (Clockwise)
Preceding gene: 222525700
Following gene: 222525704
Centisome position: 58.74
GC content: 49.32
Gene sequence:
>876_bases ATGGAACGAGCAGCTTTTGGCAAACTGGTGCAGGCCCTGCGGCGCGAACATCGTGACGAGAAGGGGCGGGTGTGGACGCA GGAGGTGCTTGCGGAGCGCACGCAGCTTCCGAAACGGACGATAGAACGGATTGAAAATGGTTCACTGGCCCATCTGGATG CCGATATTCTCCTGCGACTGGCCGATGCACTGGAGTTGACGATTGGTGAGCGGCGTGAGTTTTTCTTCGCGGCAACCGGT ATTATCGAACAAAAGAGCGCAACATATAAGCGTTCTCCAGAAGAGTCTCTGCAATATCTGATCGATATGATCAGGAATAT GAACGTACCGGCGTTTGTGACGGATCAATATGTGAATATTATCGCAGCTAATATGATCACCATCAGATTTTTTAACATTC CAATGGAACTGATTGAAACAGCTCCTCTGTTGCCCCATGGCTATAATTTGATGAGAGTGGTGTTTGGAACGGAATATGAT TTTCGGCGGGTTGTGGGTACAATGTGGGACGAGGTGGCCCGGCATAATATGCAATTGTTTCGTGCGATTTCCTTACGGGT TCGCGCTGATGGTTACTTTGTTGAGTTGCTGGACAATTTAATGCAATATCGGGAGTTCAAACGCTTTTGGGAACGTGCTC ATCTTGAGACTGAGGATACGAGTGCTGAAAATTTCTGGTATCAGTATACCCACCCGGTGTACGGTCTCCTCAGTTATGTT TCCAGCCGTTCCCAAATTCCAACCAGTATGGGCTTATTGTCCATGCACACGTATATCCCTCTCTCACCCGCAACAACAGA TTTGTTCGCGAAGTTGTCTACCGTCGCCAATCAGGATGTGATCCGTCTCGCCCCATGGCCGCGCAGTAATGGCTAG
Upstream 100 bases:
>100_bases AACATTCATCAGTAAACCCATCTCTGGTAACAATCTGGAAATAGTCATCATATATCATACGTACTACCAGTCCCGTGCAT AACCGGTTGAGGAGCATGCC
Downstream 100 bases:
>100_bases AACTTATTTCATAAAAAGTTGTACTGTCGCGCTCGAATAACCATCTCCGGTACCATCACGTGCTGGATTGGTTGCCTTGC TCGCTCCTCATCCGCGTGTG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MERAAFGKLVQALRREHRDEKGRVWTQEVLAERTQLPKRTIERIENGSLAHLDADILLRLADALELTIGERREFFFAATG IIEQKSATYKRSPEESLQYLIDMIRNMNVPAFVTDQYVNIIAANMITIRFFNIPMELIETAPLLPHGYNLMRVVFGTEYD FRRVVGTMWDEVARHNMQLFRAISLRVRADGYFVELLDNLMQYREFKRFWERAHLETEDTSAENFWYQYTHPVYGLLSYV SSRSQIPTSMGLLSMHTYIPLSPATTDLFAKLSTVANQDVIRLAPWPRSNG
Sequences:
>Translated_291_residues MERAAFGKLVQALRREHRDEKGRVWTQEVLAERTQLPKRTIERIENGSLAHLDADILLRLADALELTIGERREFFFAATG IIEQKSATYKRSPEESLQYLIDMIRNMNVPAFVTDQYVNIIAANMITIRFFNIPMELIETAPLLPHGYNLMRVVFGTEYD FRRVVGTMWDEVARHNMQLFRAISLRVRADGYFVELLDNLMQYREFKRFWERAHLETEDTSAENFWYQYTHPVYGLLSYV SSRSQIPTSMGLLSMHTYIPLSPATTDLFAKLSTVANQDVIRLAPWPRSNG >Mature_291_residues MERAAFGKLVQALRREHRDEKGRVWTQEVLAERTQLPKRTIERIENGSLAHLDADILLRLADALELTIGERREFFFAATG IIEQKSATYKRSPEESLQYLIDMIRNMNVPAFVTDQYVNIIAANMITIRFFNIPMELIETAPLLPHGYNLMRVVFGTEYD FRRVVGTMWDEVARHNMQLFRAISLRVRADGYFVELLDNLMQYREFKRFWERAHLETEDTSAENFWYQYTHPVYGLLSYV SSRSQIPTSMGLLSMHTYIPLSPATTDLFAKLSTVANQDVIRLAPWPRSNG
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33890; Mature: 33890
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERAAFGKLVQALRREHRDEKGRVWTQEVLAERTQLPKRTIERIENGSLAHLDADILLRL CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEECHHHHHHH ADALELTIGERREFFFAATGIIEQKSATYKRSPEESLQYLIDMIRNMNVPAFVTDQYVNI HHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHH IAANMITIRFFNIPMELIETAPLLPHGYNLMRVVFGTEYDFRRVVGTMWDEVARHNMQLF HHHHHHEEEEECCCHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RAISLRVRADGYFVELLDNLMQYREFKRFWERAHLETEDTSAENFWYQYTHPVYGLLSYV HHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHH SSRSQIPTSMGLLSMHTYIPLSPATTDLFAKLSTVANQDVIRLAPWPRSNG HHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCC >Mature Secondary Structure MERAAFGKLVQALRREHRDEKGRVWTQEVLAERTQLPKRTIERIENGSLAHLDADILLRL CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEECHHHHHHH ADALELTIGERREFFFAATGIIEQKSATYKRSPEESLQYLIDMIRNMNVPAFVTDQYVNI HHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHH IAANMITIRFFNIPMELIETAPLLPHGYNLMRVVFGTEYDFRRVVGTMWDEVARHNMQLF HHHHHHEEEEECCCHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RAISLRVRADGYFVELLDNLMQYREFKRFWERAHLETEDTSAENFWYQYTHPVYGLLSYV HHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHH SSRSQIPTSMGLLSMHTYIPLSPATTDLFAKLSTVANQDVIRLAPWPRSNG HHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA