| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525693
Identifier: 222525693
GI number: 222525693
Start: 3085123
End: 3086448
Strand: Direct
Name: 222525693
Synonym: Chy400_2444
Alternate gene names: NA
Gene position: 3085123-3086448 (Clockwise)
Preceding gene: 222525692
Following gene: 222525694
Centisome position: 58.55
GC content: 52.56
Gene sequence:
>1326_bases ATGGGGGGGAGGGGGGAAAGCGCATCAGATGCCGTTTTCTACACGGGGGAGATAGTGACAACTCAACCTGCCATTCAGGA TCGTTATAAGAGCGATCATTTGTTTTTGCTGGTCGGTACCAACCCCTTGCCAAATTTCGTAGCAGCGACGCTCATGTTAA GGTCGCAGGGGCAACTCTATCTGGTTCACTCCGACAAAACCAGGACTGTGGCAGAACGTCTGGCGCGCTACTGGGCTGAA CATCACCGGCAACCGCAGTTTGTATGTGTCAATGAGTCGGATGGTGCTGACATTCGCCGGCACATTGAGCATGCGCTGAA ACACATTGGAGACAAGCACGTTGGTCTCAACTATACGGGTGGCACCAAAATGATGGCGGTGCACGCAACTCAGGTGATAC GAGACTACCAGAAACCCCAACGACCGGTAACCTTGAGTTATCTGGACGCACGCACGAACAGGATGTATATCGAGCATGGT AATGAGCCGGCGTTTATGACTGAGCCGTTGCTCTACGAAGTGCAACCCTCTATTCAGGACATTGTCAAATTGCATGCGTT CAGGCTTCAAGACTCGATTGCCAGGGCAGTGCAGCTTTCCGAACTGGCTACCGTTCTTGCCGGCGTTCACCAAAACCCTG ATGCAATTAAGGCGTGGCGAACGTGGTGCGACGAGGTTTTGCGCAAAAACACCCGTACCCAGAAATTCCACGAATGGGAT AAGGAAAACCGGCTTCAAAACCTGCACATTGAGTTGCCGACAGATAAATCTCTGGAAACGGTCGCCAGGCAGATGAGTAC CTCTTTTGCCACGAGTGACAGTAACTTTCGACTGCTAGAGGCAACGAAACGGTCTGGTTTTGCGAGGATCAAACACCTGT GTGAATGGCTGGACGGTAAGTGGCTGGAACACTATGTATTCGATGTTTTGAGCCAGATACGCGCGCAGCGACCTGAAAGT CGAATCCATGACATCGGTATGGGCATCCGTCCGCAGAGCGAATCGGACAGTCCGGAATACGACATTGATATAGGCGTGAT GCAGGGATACAGGCTCTACGCCATTTCATGCACAACCGACACGAATCCCGGAATGTGCAAACTGAAACTCTTTGAAGCGT ATATCCGCGCCCGTAATATGGCCGGCGATGAGGCGTGTGTGGGTCTGGTCTGCATGGTAGATACACCCGAAAACCTGCAA CGCCAGATTGTACGCTCGTGGGATGCGGAAGGCAAGGTGCGCGTGTTTGGCCGTCGGGATATGCCAGATCTGATCAACCG TATGGCCGAGTGGTTTCTCATCACAGGGGAAGGAAGGCACGCATGA
Upstream 100 bases:
>100_bases TGGAACGAGTATAGCAGAGCGTGTGCGATGAATAATCACAAGAGGTGATGATTGTTTTTCAGTAGCAGTGGTGAGGTGGA TGCAGGGTGGAAGGGGTAGG
Downstream 100 bases:
>100_bases CCGAATATATTCTGACCGCTATCGATACCACCCAAATCCAGGGGTATATCTTTGGCAGCAACAGGCTGCAAGAGAATATC GGCGGTTCTGAGCTGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MGGRGESASDAVFYTGEIVTTQPAIQDRYKSDHLFLLVGTNPLPNFVAATLMLRSQGQLYLVHSDKTRTVAERLARYWAE HHRQPQFVCVNESDGADIRRHIEHALKHIGDKHVGLNYTGGTKMMAVHATQVIRDYQKPQRPVTLSYLDARTNRMYIEHG NEPAFMTEPLLYEVQPSIQDIVKLHAFRLQDSIARAVQLSELATVLAGVHQNPDAIKAWRTWCDEVLRKNTRTQKFHEWD KENRLQNLHIELPTDKSLETVARQMSTSFATSDSNFRLLEATKRSGFARIKHLCEWLDGKWLEHYVFDVLSQIRAQRPES RIHDIGMGIRPQSESDSPEYDIDIGVMQGYRLYAISCTTDTNPGMCKLKLFEAYIRARNMAGDEACVGLVCMVDTPENLQ RQIVRSWDAEGKVRVFGRRDMPDLINRMAEWFLITGEGRHA
Sequences:
>Translated_441_residues MGGRGESASDAVFYTGEIVTTQPAIQDRYKSDHLFLLVGTNPLPNFVAATLMLRSQGQLYLVHSDKTRTVAERLARYWAE HHRQPQFVCVNESDGADIRRHIEHALKHIGDKHVGLNYTGGTKMMAVHATQVIRDYQKPQRPVTLSYLDARTNRMYIEHG NEPAFMTEPLLYEVQPSIQDIVKLHAFRLQDSIARAVQLSELATVLAGVHQNPDAIKAWRTWCDEVLRKNTRTQKFHEWD KENRLQNLHIELPTDKSLETVARQMSTSFATSDSNFRLLEATKRSGFARIKHLCEWLDGKWLEHYVFDVLSQIRAQRPES RIHDIGMGIRPQSESDSPEYDIDIGVMQGYRLYAISCTTDTNPGMCKLKLFEAYIRARNMAGDEACVGLVCMVDTPENLQ RQIVRSWDAEGKVRVFGRRDMPDLINRMAEWFLITGEGRHA >Mature_440_residues GGRGESASDAVFYTGEIVTTQPAIQDRYKSDHLFLLVGTNPLPNFVAATLMLRSQGQLYLVHSDKTRTVAERLARYWAEH HRQPQFVCVNESDGADIRRHIEHALKHIGDKHVGLNYTGGTKMMAVHATQVIRDYQKPQRPVTLSYLDARTNRMYIEHGN EPAFMTEPLLYEVQPSIQDIVKLHAFRLQDSIARAVQLSELATVLAGVHQNPDAIKAWRTWCDEVLRKNTRTQKFHEWDK ENRLQNLHIELPTDKSLETVARQMSTSFATSDSNFRLLEATKRSGFARIKHLCEWLDGKWLEHYVFDVLSQIRAQRPESR IHDIGMGIRPQSESDSPEYDIDIGVMQGYRLYAISCTTDTNPGMCKLKLFEAYIRARNMAGDEACVGLVCMVDTPENLQR QIVRSWDAEGKVRVFGRRDMPDLINRMAEWFLITGEGRHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50538; Mature: 50407
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGRGESASDAVFYTGEIVTTQPAIQDRYKSDHLFLLVGTNPLPNFVAATLMLRSQGQLY CCCCCCCCCCEEEEECEEEECCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEE LVHSDKTRTVAERLARYWAEHHRQPQFVCVNESDGADIRRHIEHALKHIGDKHVGLNYTG EEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECC GTKMMAVHATQVIRDYQKPQRPVTLSYLDARTNRMYIEHGNEPAFMTEPLLYEVQPSIQD CCEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCEECCCCCEECCCCHHH IVKLHAFRLQDSIARAVQLSELATVLAGVHQNPDAIKAWRTWCDEVLRKNTRTQKFHEWD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH KENRLQNLHIELPTDKSLETVARQMSTSFATSDSNFRLLEATKRSGFARIKHLCEWLDGK HHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCH WLEHYVFDVLSQIRAQRPESRIHDIGMGIRPQSESDSPEYDIDIGVMQGYRLYAISCTTD HHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEEECC TNPGMCKLKLFEAYIRARNMAGDEACVGLVCMVDTPENLQRQIVRSWDAEGKVRVFGRRD CCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC MPDLINRMAEWFLITGEGRHA CHHHHHHHHHEEEEECCCCCC >Mature Secondary Structure GGRGESASDAVFYTGEIVTTQPAIQDRYKSDHLFLLVGTNPLPNFVAATLMLRSQGQLY CCCCCCCCCEEEEECEEEECCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEE LVHSDKTRTVAERLARYWAEHHRQPQFVCVNESDGADIRRHIEHALKHIGDKHVGLNYTG EEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECC GTKMMAVHATQVIRDYQKPQRPVTLSYLDARTNRMYIEHGNEPAFMTEPLLYEVQPSIQD CCEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCEECCCCCEECCCCHHH IVKLHAFRLQDSIARAVQLSELATVLAGVHQNPDAIKAWRTWCDEVLRKNTRTQKFHEWD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH KENRLQNLHIELPTDKSLETVARQMSTSFATSDSNFRLLEATKRSGFARIKHLCEWLDGK HHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCH WLEHYVFDVLSQIRAQRPESRIHDIGMGIRPQSESDSPEYDIDIGVMQGYRLYAISCTTD HHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEEECC TNPGMCKLKLFEAYIRARNMAGDEACVGLVCMVDTPENLQRQIVRSWDAEGKVRVFGRRD CCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC MPDLINRMAEWFLITGEGRHA CHHHHHHHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA