| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525694
Identifier: 222525694
GI number: 222525694
Start: 3086445
End: 3088067
Strand: Direct
Name: 222525694
Synonym: Chy400_2445
Alternate gene names: NA
Gene position: 3086445-3088067 (Clockwise)
Preceding gene: 222525693
Following gene: 222525695
Centisome position: 58.58
GC content: 52.62
Gene sequence:
>1623_bases ATGACCGAATATATTCTGACCGCTATCGATACCACCCAAATCCAGGGGTATATCTTTGGCAGCAACAGGCTGCAAGAGAA TATCGGCGGTTCTGAGCTGGTCGAACGGGCAACGCATCAATGGGTGTACGAGGCGCTCCCTGCTGCTCACAACGTGGTGG ATGTGGCTACAGGCAAACTTGATAATAACCGTACCATCGACACCCTGGACGCAGAGGTTATCTACGCTGGTGGTGGCAAT ACGGTGATCCTGTTCAAGACCATGGATCTGGCACGCGCATTTACTAGTCGATGGACGCGGCGGGTTCTGCGCGAAGCCCC TGGTCTGGAAGTTGTAGTGGCGCACCGTCGTTTTGATTGGACGAAGGAAGCCCTATCACAGGTTGTCAGTACGACGTTAG GTGTTGATCTGGCGCGCAAAAAACATCATCGGACTCCCTCAATGCCACTGCTGGGGCTGGGTGTGACGGTGCCTTGCGCT TCGACCGGACTGGTCGCATCCCGAATCGTTGAAAAAAAGCCGGTATCGCTGGAAATCAGGGCAAAAAGTGATGCAAAGGT CCAAAATCAGAGTGTGGAACGCCTGAAAGCCAGATTGCCGCAGATAGAGCAGGGAAACTGGGAAATTCCGCGCGATTTTG ATGATTTAGGTCGAGTTAAGGGTGAAGAAAGTTATATTGCGGTTGTTCATGCTGATGGTAATGGGATTGGGCGGCGGGTG GAAGCCATTGCCCGTCGCTACGGCACCCCTCAGCAGAACCGGGCGTATATTGAAGCAATCCGCAACTTCTCGCACAGTCT TGAGCACGCTGCTACTCAGGCTCTGAATAGCGTCGTTGACCTGATGGCAGCAGCCTTTATTGCCGACGATGAACTTGCCA ACCGTCATCGCCAGAAATTTCCTATTCGTCCCATCGTGTTTGGTGGTGATGATGTGACGTTTGTCTGCCACGGCAGTTAC GGTCTATCACTGGCAGTGCGTTATCTGGAAGCATTTGAGGCTGCAACGAAAAATGAACCGGCTTTCGAGGGTAAACCAGC GTATGCATGTGCCGGCGTCGCCATTGTCAAGACGCACTATCCTTTTGCCCGTGCCTACCGTTTAAGTGAGCAGCTCTGCC GTTCCGCCAAACAGATGCTCAAACAGGCAGGGATCGATGGCTCGGCCCTGGACTGGCACATCGCAATGAGTGGTATTACC GGTTCGTTAGATGAGATTCGTCTGCGTGAATACACGATCAGGCGCGGCTCGCTCTCTATGCGTCCGGTATTGCTTGACGA TTCTAAACAAACCTGGCGTAGCTGGCCGGTCTTCAAAACGTTGCTGGACCAATTCATCGATGAACACGGCGAATGGTTTG ACCGCCGCAATAAAGTGAAAAGCCTCCGCGAAGCCTTACGTGCAGGACCTGACAAAGTACGGGAATTTCTCCATACATAT CAACTCGGGCAACTGCCCGTTTCCCATTCGCTCAATGTTTTGGGTTACGAACAAAGCGGTTGGGCAGGTGATCGTTGCGT GTACTTTGACGCCATTGAGATGATGGATTTTTTTGTAGACCTGCAAAAGATCGTTGCGGATTCTCTCGGGGAACAGGAGG AGGCCGCACATGCCGGCGTATAA
Upstream 100 bases:
>100_bases ATGCGGAAGGCAAGGTGCGCGTGTTTGGCCGTCGGGATATGCCAGATCTGATCAACCGTATGGCCGAGTGGTTTCTCATC ACAGGGGAAGGAAGGCACGC
Downstream 100 bases:
>100_bases ACTTCAATTCGATCTGCGTTCTGCCGCTACCTTTGGGCGTGGTGATGGTGTTGCCGGTCTGGTCGACGAAGAGGTAGAGC ACGATGCTGATGGATTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MTEYILTAIDTTQIQGYIFGSNRLQENIGGSELVERATHQWVYEALPAAHNVVDVATGKLDNNRTIDTLDAEVIYAGGGN TVILFKTMDLARAFTSRWTRRVLREAPGLEVVVAHRRFDWTKEALSQVVSTTLGVDLARKKHHRTPSMPLLGLGVTVPCA STGLVASRIVEKKPVSLEIRAKSDAKVQNQSVERLKARLPQIEQGNWEIPRDFDDLGRVKGEESYIAVVHADGNGIGRRV EAIARRYGTPQQNRAYIEAIRNFSHSLEHAATQALNSVVDLMAAAFIADDELANRHRQKFPIRPIVFGGDDVTFVCHGSY GLSLAVRYLEAFEAATKNEPAFEGKPAYACAGVAIVKTHYPFARAYRLSEQLCRSAKQMLKQAGIDGSALDWHIAMSGIT GSLDEIRLREYTIRRGSLSMRPVLLDDSKQTWRSWPVFKTLLDQFIDEHGEWFDRRNKVKSLREALRAGPDKVREFLHTY QLGQLPVSHSLNVLGYEQSGWAGDRCVYFDAIEMMDFFVDLQKIVADSLGEQEEAAHAGV
Sequences:
>Translated_540_residues MTEYILTAIDTTQIQGYIFGSNRLQENIGGSELVERATHQWVYEALPAAHNVVDVATGKLDNNRTIDTLDAEVIYAGGGN TVILFKTMDLARAFTSRWTRRVLREAPGLEVVVAHRRFDWTKEALSQVVSTTLGVDLARKKHHRTPSMPLLGLGVTVPCA STGLVASRIVEKKPVSLEIRAKSDAKVQNQSVERLKARLPQIEQGNWEIPRDFDDLGRVKGEESYIAVVHADGNGIGRRV EAIARRYGTPQQNRAYIEAIRNFSHSLEHAATQALNSVVDLMAAAFIADDELANRHRQKFPIRPIVFGGDDVTFVCHGSY GLSLAVRYLEAFEAATKNEPAFEGKPAYACAGVAIVKTHYPFARAYRLSEQLCRSAKQMLKQAGIDGSALDWHIAMSGIT GSLDEIRLREYTIRRGSLSMRPVLLDDSKQTWRSWPVFKTLLDQFIDEHGEWFDRRNKVKSLREALRAGPDKVREFLHTY QLGQLPVSHSLNVLGYEQSGWAGDRCVYFDAIEMMDFFVDLQKIVADSLGEQEEAAHAGV >Mature_539_residues TEYILTAIDTTQIQGYIFGSNRLQENIGGSELVERATHQWVYEALPAAHNVVDVATGKLDNNRTIDTLDAEVIYAGGGNT VILFKTMDLARAFTSRWTRRVLREAPGLEVVVAHRRFDWTKEALSQVVSTTLGVDLARKKHHRTPSMPLLGLGVTVPCAS TGLVASRIVEKKPVSLEIRAKSDAKVQNQSVERLKARLPQIEQGNWEIPRDFDDLGRVKGEESYIAVVHADGNGIGRRVE AIARRYGTPQQNRAYIEAIRNFSHSLEHAATQALNSVVDLMAAAFIADDELANRHRQKFPIRPIVFGGDDVTFVCHGSYG LSLAVRYLEAFEAATKNEPAFEGKPAYACAGVAIVKTHYPFARAYRLSEQLCRSAKQMLKQAGIDGSALDWHIAMSGITG SLDEIRLREYTIRRGSLSMRPVLLDDSKQTWRSWPVFKTLLDQFIDEHGEWFDRRNKVKSLREALRAGPDKVREFLHTYQ LGQLPVSHSLNVLGYEQSGWAGDRCVYFDAIEMMDFFVDLQKIVADSLGEQEEAAHAGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60367; Mature: 60236
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEYILTAIDTTQIQGYIFGSNRLQENIGGSELVERATHQWVYEALPAAHNVVDVATGKL CCCEEEEEEEEEEEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEHHCCCC DNNRTIDTLDAEVIYAGGGNTVILFKTMDLARAFTSRWTRRVLREAPGLEVVVAHRRFDW CCCCCEEECCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH TKEALSQVVSTTLGVDLARKKHHRTPSMPLLGLGVTVPCASTGLVASRIVEKKPVSLEIR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEECCCCCCHHHHHHHHHCCCCEEEEE AKSDAKVQNQSVERLKARLPQIEQGNWEIPRDFDDLGRVKGEESYIAVVHADGNGIGRRV ECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCCCHHHHH EAIARRYGTPQQNRAYIEAIRNFSHSLEHAATQALNSVVDLMAAAFIADDELANRHRQKF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC PIRPIVFGGDDVTFVCHGSYGLSLAVRYLEAFEAATKNEPAFEGKPAYACAGVAIVKTHY CCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCEEEEEECC PFARAYRLSEQLCRSAKQMLKQAGIDGSALDWHIAMSGITGSLDEIRLREYTIRRGSLSM CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHEECCCCCC RPVLLDDSKQTWRSWPVFKTLLDQFIDEHGEWFDRRNKVKSLREALRAGPDKVREFLHTY CEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH QLGQLPVSHSLNVLGYEQSGWAGDRCVYFDAIEMMDFFVDLQKIVADSLGEQEEAAHAGV HHCCCCCCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure TEYILTAIDTTQIQGYIFGSNRLQENIGGSELVERATHQWVYEALPAAHNVVDVATGKL CCEEEEEEEEEEEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEHHCCCC DNNRTIDTLDAEVIYAGGGNTVILFKTMDLARAFTSRWTRRVLREAPGLEVVVAHRRFDW CCCCCEEECCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH TKEALSQVVSTTLGVDLARKKHHRTPSMPLLGLGVTVPCASTGLVASRIVEKKPVSLEIR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEECCCCCCHHHHHHHHHCCCCEEEEE AKSDAKVQNQSVERLKARLPQIEQGNWEIPRDFDDLGRVKGEESYIAVVHADGNGIGRRV ECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCCCHHHHH EAIARRYGTPQQNRAYIEAIRNFSHSLEHAATQALNSVVDLMAAAFIADDELANRHRQKF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC PIRPIVFGGDDVTFVCHGSYGLSLAVRYLEAFEAATKNEPAFEGKPAYACAGVAIVKTHY CCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCEEEEEECC PFARAYRLSEQLCRSAKQMLKQAGIDGSALDWHIAMSGITGSLDEIRLREYTIRRGSLSM CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHEECCCCCC RPVLLDDSKQTWRSWPVFKTLLDQFIDEHGEWFDRRNKVKSLREALRAGPDKVREFLHTY CEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH QLGQLPVSHSLNVLGYEQSGWAGDRCVYFDAIEMMDFFVDLQKIVADSLGEQEEAAHAGV HHCCCCCCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA