Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222525654

Identifier: 222525654

GI number: 222525654

Start: 3031615

End: 3032610

Strand: Direct

Name: 222525654

Synonym: Chy400_2405

Alternate gene names: NA

Gene position: 3031615-3032610 (Clockwise)

Preceding gene: 222525653

Following gene: 222525655

Centisome position: 57.54

GC content: 57.33

Gene sequence:

>996_bases
ATGATTCGAACTGTAACGCCGGGTGATCTCTGGTTGCTGCGGCGTAAACCTCGCTATCAACAGGTGCTCTACACCGAACG
ACTGCTGGCGTATAGCCATCGGCCGCTCTGGTTTGCTCTGCAAAGCATGCTGGCCGGCAATCATCGGGAACGAACAACCC
TGGTGCTGGCTGAAGGTGGTGGGTTTGCCCTGGCACAGGCGATGGGTCGTCGTGGCCGGCCAGAACAAGATGTGATCTAT
CTGGCGACCAACGGAACGCGGAGCGAACATACTCCCAGTGATTACGAGCTTTGGTTCCATCTGCTGCACCAGTTGTGCGC
GAATGCTGCGCACCACTCGGTGCAGCGCCTCTACGCAGCGCTACCCTGTCAGCACAACGAATTGCGGGAAATCTTCCGTC
AGGTTGGCTTCCAGGCCTACACCCATCGTCATCTCTTTCATCTCTCTGGCCCGGACTGGGATCAGGGTACGCGCCTGGCC
CCTATGCGTATGCAGGCACGTCGAGACCACTGGGCGATACATAAACTCTACGGTATGGCAACACCGCATCTCGTCCAACA
GGCGGAAGTGTACAACGCCCGTAACTGGACGCTGCATGAGGCCTATTCCCTGGTACGTCGCCAGGCATGGGTGCTTGGCC
CTGATGATGATCTGGTGGCTTATTTGCGTCTGCTCAGTGGGCCGAATGGCCACGTCTTTTCGTTGATCATCCGGCCTGAT
GAACGTGAGCAGGCAGTAGATGTCTTGCGGTTTGGTCTGGCGCAGCTCAGCGATAGCCGTCCGGTCTATCTCTTGCTGCG
CGAGTATCAACAAGAATTGTTTGAACCGGCAATGCGCCTCGGCTTTCAACCGGTTGGCGAGCAGACCTTACTGGTGAAAC
ATATGGTGATGCCGATCCGTCGAGCGGTACTGGCACCATCGCTAGAGGTTGGGTTGGAGCCGAGAGTGTCAGTGCGTCGG
TATGTGTTGCCACCAACTGCACGGGAGGAGTGCTAA

Upstream 100 bases:

>100_bases
ACGGCAGCGTGGTGGCTGCCCGGCAGGGTCGCTTGCTGGCGACTACGTTCCATCCTGAGCTGACCGATGATGATCGGGTT
CACCGGCTCTTTCTGGAACT

Downstream 100 bases:

>100_bases
GCAGGTATGGCTGTAACGGATACGAGCAATGATATTCAGCTCTTGTTAGCAACGCTGCCGCCGGCGATTAGCGAGGCGAT
TCGGAAGGCAAATGATCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MIRTVTPGDLWLLRRKPRYQQVLYTERLLAYSHRPLWFALQSMLAGNHRERTTLVLAEGGGFALAQAMGRRGRPEQDVIY
LATNGTRSEHTPSDYELWFHLLHQLCANAAHHSVQRLYAALPCQHNELREIFRQVGFQAYTHRHLFHLSGPDWDQGTRLA
PMRMQARRDHWAIHKLYGMATPHLVQQAEVYNARNWTLHEAYSLVRRQAWVLGPDDDLVAYLRLLSGPNGHVFSLIIRPD
EREQAVDVLRFGLAQLSDSRPVYLLLREYQQELFEPAMRLGFQPVGEQTLLVKHMVMPIRRAVLAPSLEVGLEPRVSVRR
YVLPPTAREEC

Sequences:

>Translated_331_residues
MIRTVTPGDLWLLRRKPRYQQVLYTERLLAYSHRPLWFALQSMLAGNHRERTTLVLAEGGGFALAQAMGRRGRPEQDVIY
LATNGTRSEHTPSDYELWFHLLHQLCANAAHHSVQRLYAALPCQHNELREIFRQVGFQAYTHRHLFHLSGPDWDQGTRLA
PMRMQARRDHWAIHKLYGMATPHLVQQAEVYNARNWTLHEAYSLVRRQAWVLGPDDDLVAYLRLLSGPNGHVFSLIIRPD
EREQAVDVLRFGLAQLSDSRPVYLLLREYQQELFEPAMRLGFQPVGEQTLLVKHMVMPIRRAVLAPSLEVGLEPRVSVRR
YVLPPTAREEC
>Mature_331_residues
MIRTVTPGDLWLLRRKPRYQQVLYTERLLAYSHRPLWFALQSMLAGNHRERTTLVLAEGGGFALAQAMGRRGRPEQDVIY
LATNGTRSEHTPSDYELWFHLLHQLCANAAHHSVQRLYAALPCQHNELREIFRQVGFQAYTHRHLFHLSGPDWDQGTRLA
PMRMQARRDHWAIHKLYGMATPHLVQQAEVYNARNWTLHEAYSLVRRQAWVLGPDDDLVAYLRLLSGPNGHVFSLIIRPD
EREQAVDVLRFGLAQLSDSRPVYLLLREYQQELFEPAMRLGFQPVGEQTLLVKHMVMPIRRAVLAPSLEVGLEPRVSVRR
YVLPPTAREEC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38386; Mature: 38386

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTVTPGDLWLLRRKPRYQQVLYTERLLAYSHRPLWFALQSMLAGNHRERTTLVLAEGG
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCC
GFALAQAMGRRGRPEQDVIYLATNGTRSEHTPSDYELWFHLLHQLCANAAHHSVQRLYAA
CHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPCQHNELREIFRQVGFQAYTHRHLFHLSGPDWDQGTRLAPMRMQARRDHWAIHKLYGMA
CCCCHHHHHHHHHHHCHHHHHHHEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCC
TPHLVQQAEVYNARNWTLHEAYSLVRRQAWVLGPDDDLVAYLRLLSGPNGHVFSLIIRPD
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCEEEEEECCC
EREQAVDVLRFGLAQLSDSRPVYLLLREYQQELFEPAMRLGFQPVGEQTLLVKHMVMPIR
CHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RAVLAPSLEVGLEPRVSVRRYVLPPTAREEC
HHHHCCCHHCCCCCCCCHHEEECCCCCCCCC
>Mature Secondary Structure
MIRTVTPGDLWLLRRKPRYQQVLYTERLLAYSHRPLWFALQSMLAGNHRERTTLVLAEGG
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCC
GFALAQAMGRRGRPEQDVIYLATNGTRSEHTPSDYELWFHLLHQLCANAAHHSVQRLYAA
CHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPCQHNELREIFRQVGFQAYTHRHLFHLSGPDWDQGTRLAPMRMQARRDHWAIHKLYGMA
CCCCHHHHHHHHHHHCHHHHHHHEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCC
TPHLVQQAEVYNARNWTLHEAYSLVRRQAWVLGPDDDLVAYLRLLSGPNGHVFSLIIRPD
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCEEEEEECCC
EREQAVDVLRFGLAQLSDSRPVYLLLREYQQELFEPAMRLGFQPVGEQTLLVKHMVMPIR
CHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RAVLAPSLEVGLEPRVSVRRYVLPPTAREEC
HHHHCCCHHCCCCCCCCHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA