| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is aroF [H]
Identifier: 222525651
GI number: 222525651
Start: 3028836
End: 3029852
Strand: Direct
Name: aroF [H]
Synonym: Chy400_2402
Alternate gene names: 222525651
Gene position: 3028836-3029852 (Clockwise)
Preceding gene: 222525650
Following gene: 222525652
Centisome position: 57.48
GC content: 57.33
Gene sequence:
>1017_bases ATGATTGTCGTCATGCAAACCGACTCAACCCCTGGACAGATTGAAGCGGTGTTAAACCGGCTGCGCGAACACAATTTGCG CGGCCATCTGACCGTTGGTGAGGAGCGCACGGTGATCGCGGTGGTGGGGGCAGCGATCCCGCCAACCTTGCGGGAAGAGC TAGAACACTTTGCCGGTGTGAAGGAGACCCTGCGCATCACGCAACCCTACAAGCTGGTATCCCGTGAGGTAAAGCCCAGC GATACGGTGGTGACGGTTGGTGATGTAAAGGTTGGCGGTGGGCACCTGGCAATTATTGCCGGCCCGTGCTCGGTTGAGAG TGAAGAGCAGATTATGGCGACCGCCCGTGCAGTACGCGAGGCTGGGGCGAACATGTTGCGCGGTGGTGCGTTCAAGCCTC GCTCATCGCCTTACAGTTTCCGTGGCCTGGGTGAGGTTGGTTTACAGTTGCTGGCGCAGGCACGTGCCGAGACGGGATTG CCAATTGTGACCGAAGTTATGACTCCGGCTGACGTTGATCTGGTTGCCCGCTATGCCGATGTCTTGCAGATCGGCGCCCG CAACATGCAGAATTATCAGTTGCTGGAAGAGGTCGGGCGTACCGGCATGCCGGTGCTGCTCAAGCGCGGTTTATCGGCTA CGATTGAAGAGTGGTTGTTGTCGGCTGAGTACATTATTGCCCAGGGTAATCCAAATGTGATTCTGTGTGAGCGCGGAATC CGCACGTTCGAGACGGCGACCCGCAATACCCTCGATCTGAATGCAGTAGCCGTAGCCAGGAAGCGCTCACATCTACCGGT AATTGTTGATCCGAGTCACGGTACCGGGAAGTGGTATCTGGTTCCACCATTAACCCTGGCTGCAATTGCCGCCGGTGCTG ATGGTGTGATCATTGAAGTTCACCCCGATCCTGATCGGGCAAAGTCGGACGGCGGCCAGTCACTGAACCCAGAGAACTTC ATGGGCCTGGTGCCCCAAATGCGAGCCATCGCGAAAGTTGTTGGCAAGACCTGGTAA
Upstream 100 bases:
>100_bases CATGAGTCGTCGTCAAGACCCTGCCGGACACGCAGCGTTGCGTGTTGTGCCCGTTTTGTCTACCGATGCCTGTTCTTGTA TGCCTGAGGAGGACCGTTCC
Downstream 100 bases:
>100_bases TTACCACGCATGTCAGGAGCGCACAACGAAGTGCTCTCCTCCCCGGCATAGCTGCCCAAACGCCGCACAATGACTGTGCT CCTCGTAAAATACGGTGATC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MIVVMQTDSTPGQIEAVLNRLREHNLRGHLTVGEERTVIAVVGAAIPPTLREELEHFAGVKETLRITQPYKLVSREVKPS DTVVTVGDVKVGGGHLAIIAGPCSVESEEQIMATARAVREAGANMLRGGAFKPRSSPYSFRGLGEVGLQLLAQARAETGL PIVTEVMTPADVDLVARYADVLQIGARNMQNYQLLEEVGRTGMPVLLKRGLSATIEEWLLSAEYIIAQGNPNVILCERGI RTFETATRNTLDLNAVAVARKRSHLPVIVDPSHGTGKWYLVPPLTLAAIAAGADGVIIEVHPDPDRAKSDGGQSLNPENF MGLVPQMRAIAKVVGKTW
Sequences:
>Translated_338_residues MIVVMQTDSTPGQIEAVLNRLREHNLRGHLTVGEERTVIAVVGAAIPPTLREELEHFAGVKETLRITQPYKLVSREVKPS DTVVTVGDVKVGGGHLAIIAGPCSVESEEQIMATARAVREAGANMLRGGAFKPRSSPYSFRGLGEVGLQLLAQARAETGL PIVTEVMTPADVDLVARYADVLQIGARNMQNYQLLEEVGRTGMPVLLKRGLSATIEEWLLSAEYIIAQGNPNVILCERGI RTFETATRNTLDLNAVAVARKRSHLPVIVDPSHGTGKWYLVPPLTLAAIAAGADGVIIEVHPDPDRAKSDGGQSLNPENF MGLVPQMRAIAKVVGKTW >Mature_338_residues MIVVMQTDSTPGQIEAVLNRLREHNLRGHLTVGEERTVIAVVGAAIPPTLREELEHFAGVKETLRITQPYKLVSREVKPS DTVVTVGDVKVGGGHLAIIAGPCSVESEEQIMATARAVREAGANMLRGGAFKPRSSPYSFRGLGEVGLQLLAQARAETGL PIVTEVMTPADVDLVARYADVLQIGARNMQNYQLLEEVGRTGMPVLLKRGLSATIEEWLLSAEYIIAQGNPNVILCERGI RTFETATRNTLDLNAVAVARKRSHLPVIVDPSHGTGKWYLVPPLTLAAIAAGADGVIIEVHPDPDRAKSDGGQSLNPENF MGLVPQMRAIAKVVGKTW
Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG2876
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787466, Length=272, Percent_Identity=27.9411764705882, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006268 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 36408; Mature: 36408
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVVMQTDSTPGQIEAVLNRLREHNLRGHLTVGEERTVIAVVGAAIPPTLREELEHFAGV CEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCH KETLRITQPYKLVSREVKPSDTVVTVGDVKVGGGHLAIIAGPCSVESEEQIMATARAVRE HHHHCCCCCHHHHHCCCCCCCCEEEECCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHH AGANMLRGGAFKPRSSPYSFRGLGEVGLQLLAQARAETGLPIVTEVMTPADVDLVARYAD HCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHH VLQIGARNMQNYQLLEEVGRTGMPVLLKRGLSATIEEWLLSAEYIIAQGNPNVILCERGI HHHHHHCCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHCCEEEEECCCCCEEEECCCC RTFETATRNTLDLNAVAVARKRSHLPVIVDPSHGTGKWYLVPPLTLAAIAAGADGVIIEV HHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCCEEEEECCHHHHHHHCCCCEEEEEE HPDPDRAKSDGGQSLNPENFMGLVPQMRAIAKVVGKTW CCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIVVMQTDSTPGQIEAVLNRLREHNLRGHLTVGEERTVIAVVGAAIPPTLREELEHFAGV CEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCH KETLRITQPYKLVSREVKPSDTVVTVGDVKVGGGHLAIIAGPCSVESEEQIMATARAVRE HHHHCCCCCHHHHHCCCCCCCCEEEECCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHH AGANMLRGGAFKPRSSPYSFRGLGEVGLQLLAQARAETGLPIVTEVMTPADVDLVARYAD HCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHH VLQIGARNMQNYQLLEEVGRTGMPVLLKRGLSATIEEWLLSAEYIIAQGNPNVILCERGI HHHHHHCCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHCCEEEEECCCCCEEEECCCC RTFETATRNTLDLNAVAVARKRSHLPVIVDPSHGTGKWYLVPPLTLAAIAAGADGVIIEV HHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCCEEEEECCHHHHHHHCCCCEEEEEE HPDPDRAKSDGGQSLNPENFMGLVPQMRAIAKVVGKTW CCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571; 12743122 [H]