| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is mrpA [H]
Identifier: 222525634
GI number: 222525634
Start: 3012463
End: 3014835
Strand: Direct
Name: mrpA [H]
Synonym: Chy400_2385
Alternate gene names: 222525634
Gene position: 3012463-3014835 (Clockwise)
Preceding gene: 222525632
Following gene: 222525635
Centisome position: 57.17
GC content: 57.06
Gene sequence:
>2373_bases ATGATCTATCCGCTTGTATTCATTGCGCTAGCGGCAGCTCCCCTGGCATTACTCGCCCGCTTCCCGGCGCGTGACCGAAT TGCGTGGGGGTTGGCGTTGATCCCGTTGCTCATCTTCGGTCTGACGCTGGCGCAGGCTGCGCCGGTGTGGGAAGGCGGGC TGGTGACTGAACGGATAGAGTGGGTGCCGGCGCTAGGGTTGCATCTGAGCTTTACGCTTGATGGTTTGAGCCTGCTGTTT GCCCTCATTATCTCTGGCATTGGGACATTGATCGTCGGTTATGCCGGCCACTATCTCGGATCTGACAGCGGTCTTGGCCG TTTTCTGGCTTACCTGATGCTGTTTATGGGTGCGATGCTGGGGCTGGTGCTGGCCGGCAATGTGCTGACGATGTTTGTGT TCTGGGAATTGACCTCGGTAACGTCGTATTTGCTCATTGGCTACAAGCACGATTATGCCGATGCCCGGCGGGGCGCCCTA CATTCACTCCTGGTAACCGGTGGCGGTGGACTGGCGCTGCTCGTCGGCTTGTTACTGCTTGGTCAGGCGGTTGGGAGCTA CGAGTTCAGTGATATTCTGGCGGCTGGCGATACGTTGCACGCGCATCCGCTTTACCCGGCAGCAGTGATCTTAATTCTGC TTGGCTGTTTCACCAAATCGGCCCAGATACCCTTCCACTTCTGGCTTCCCGGTGCGATGCAGGCACCGACACCGGCCAGT GCCTTTCTCCACTCGGCCACAATGGTCAAGGCCGGGGTATACCTCATGGCGCGACTCAGCCCGGCACTGGGTGGAACCGC GCTGTGGGATGTGACGCTGGCAGTGGTTGGCGGGGCGACAATGACCTTCGCTGCGATTGTGGCGATGCGGCAGTTCGATC TGAAGGCGATGCTGGCCTATACCACGATCAGCATGCTGGGTGCCTTGACGATGCAGATCGGATTGGGTGGGAAGTACGGT GCCGAAGGTGTGGCGACAAATATTCTGGCCCACGCGCTGTACAAATCGGCCCTGTTTATGCTTGCCGGGGTGATTGACCA CGAGTGTGGGACGCGCGATCTCCGTCGTCTCGGCGGACTGCGTAAGTACATGCCGCAGACGATGGTGATTACGATGCTGG CTTTGCTTTCATTTGGTGGCATTCCGGTGATGTTTGGCTTTGTAGCCAAAGAGCTAATGCTCGAAGCAGCGCTGGAAACC GAGTTGGGTGCGACATTAAGTGTGCTGGCGGTGGCAGCCATTGCCATCACTGCTATCGCCTATCTGATTACTGGCTGGCG CCTGTTCAGCAATGCCTTCCTCGGTCAGCGCAGTGTTGCAGCGATGCAGCAGCATATTACCGATCCGGCACCGGGGATGT TGATCGGTCCTGGTGTTCCGGCAGTATTGTCATTGATCATCCCTATCGCGTTTTTGGGACCGATCAGTACGTTGATCGCT GCGGCCAGTGCATCTATTTATGGTCAGCCGCTTGACGTGAAACTGGCGCTCTGGCACGGGATTAATCCCGCACTGCTGGT GAGTCTGAGCGCGATTGTGATTGGCGTCGTGATGTTCCGTTTCGTCGATCAACTGGCCGGTTTACGCGGTTGGCCGGCCT GGTCACGCGGCGATATGATCTTCGACCGTCTGATCGAGAGTACCCTGACCGGTGCTACCGCGTTGACGCGAACCATTCAG GAAGGCCGTCTGCGCCGATATATTCTGCTCACGGCGCTCACCATGCTGGTTTTCGTTGGTGTTCCGTTTGTCAGTTTTGG ACTTGGGGCGATTCGCTTCGATCTCGATCCACAGTTGCAGCTCTACGAGATACTGGCGGCGGCTCTCATACCGATTGGAG TTATTGCCACGATTAACGCTCGCACCCGTCTGGGAGCCATCATTGCTGTTGGTGTTGTCGGCGCAATGGTATCGCTCCTC TTCGTTCTCTTCTCAGCGCCTGACCTGGCATTGACCCAGTTGCTGATTGAAGTGCTCTCAACCGTGTTTCTGTTACTGGT CTTCTCCGTCCTACCGGTACGCTTCGAGAGCTTCTCGTCGGCCTGGGTGCGGCGGCGCGATGCGATTGTGGCGACGGTCA TGGGTGTGCTGATGGGTGGTCTGGTACTGGCAGCGGCCACAAACGATAGTTTTGCGCCGTTAGCACCCTTCTTCCTGGAA AATAGTCTGGAACTGGGCAAAGGCGCCAACGTCGTGAATGTAATCCTGGTTGACTTCCGCGGTTTCGATACCATGGGCGA AATTACGGTCTTGTTCATCGCGCTCCTTGGTATCTATGGCTTGTTACGGTTACGACAGGGGAAAGACAATGCGACACCAG AGCGGGTCACCACAACCGAACCGGTCAACGAACCGGTCGATGCCCAGAGATAG
Upstream 100 bases:
>100_bases CAACTGGAACGTTGTCCAGCCGTTGCCACTTTCGCTGATGGTGTCGTACCGTGCCACGTCAGGTGGTAGTAGCGTTTTGT AGTGTTTGAACGAGGAGAGC
Downstream 100 bases:
>100_bases TGCCTTATACGACTCGTTAATTCTGCGCACGATTAGCCGGTTGATGATGCCGGTGCTGTTGTTGCTTTCAATCTTTATGC TCCTGCGCGGCCATAATTTG
Product: NADH dehydrogenase (quinone)
Products: NAD+; ubiquinol [C]
Alternate protein names: Mrp complex subunit A; Multiple resistance and pH homeostasis protein A [H]
Number of amino acids: Translated: 790; Mature: 790
Protein sequence:
>790_residues MIYPLVFIALAAAPLALLARFPARDRIAWGLALIPLLIFGLTLAQAAPVWEGGLVTERIEWVPALGLHLSFTLDGLSLLF ALIISGIGTLIVGYAGHYLGSDSGLGRFLAYLMLFMGAMLGLVLAGNVLTMFVFWELTSVTSYLLIGYKHDYADARRGAL HSLLVTGGGGLALLVGLLLLGQAVGSYEFSDILAAGDTLHAHPLYPAAVILILLGCFTKSAQIPFHFWLPGAMQAPTPAS AFLHSATMVKAGVYLMARLSPALGGTALWDVTLAVVGGATMTFAAIVAMRQFDLKAMLAYTTISMLGALTMQIGLGGKYG AEGVATNILAHALYKSALFMLAGVIDHECGTRDLRRLGGLRKYMPQTMVITMLALLSFGGIPVMFGFVAKELMLEAALET ELGATLSVLAVAAIAITAIAYLITGWRLFSNAFLGQRSVAAMQQHITDPAPGMLIGPGVPAVLSLIIPIAFLGPISTLIA AASASIYGQPLDVKLALWHGINPALLVSLSAIVIGVVMFRFVDQLAGLRGWPAWSRGDMIFDRLIESTLTGATALTRTIQ EGRLRRYILLTALTMLVFVGVPFVSFGLGAIRFDLDPQLQLYEILAAALIPIGVIATINARTRLGAIIAVGVVGAMVSLL FVLFSAPDLALTQLLIEVLSTVFLLLVFSVLPVRFESFSSAWVRRRDAIVATVMGVLMGGLVLAAATNDSFAPLAPFFLE NSLELGKGANVVNVILVDFRGFDTMGEITVLFIALLGIYGLLRLRQGKDNATPERVTTTEPVNEPVDAQR
Sequences:
>Translated_790_residues MIYPLVFIALAAAPLALLARFPARDRIAWGLALIPLLIFGLTLAQAAPVWEGGLVTERIEWVPALGLHLSFTLDGLSLLF ALIISGIGTLIVGYAGHYLGSDSGLGRFLAYLMLFMGAMLGLVLAGNVLTMFVFWELTSVTSYLLIGYKHDYADARRGAL HSLLVTGGGGLALLVGLLLLGQAVGSYEFSDILAAGDTLHAHPLYPAAVILILLGCFTKSAQIPFHFWLPGAMQAPTPAS AFLHSATMVKAGVYLMARLSPALGGTALWDVTLAVVGGATMTFAAIVAMRQFDLKAMLAYTTISMLGALTMQIGLGGKYG AEGVATNILAHALYKSALFMLAGVIDHECGTRDLRRLGGLRKYMPQTMVITMLALLSFGGIPVMFGFVAKELMLEAALET ELGATLSVLAVAAIAITAIAYLITGWRLFSNAFLGQRSVAAMQQHITDPAPGMLIGPGVPAVLSLIIPIAFLGPISTLIA AASASIYGQPLDVKLALWHGINPALLVSLSAIVIGVVMFRFVDQLAGLRGWPAWSRGDMIFDRLIESTLTGATALTRTIQ EGRLRRYILLTALTMLVFVGVPFVSFGLGAIRFDLDPQLQLYEILAAALIPIGVIATINARTRLGAIIAVGVVGAMVSLL FVLFSAPDLALTQLLIEVLSTVFLLLVFSVLPVRFESFSSAWVRRRDAIVATVMGVLMGGLVLAAATNDSFAPLAPFFLE NSLELGKGANVVNVILVDFRGFDTMGEITVLFIALLGIYGLLRLRQGKDNATPERVTTTEPVNEPVDAQR >Mature_790_residues MIYPLVFIALAAAPLALLARFPARDRIAWGLALIPLLIFGLTLAQAAPVWEGGLVTERIEWVPALGLHLSFTLDGLSLLF ALIISGIGTLIVGYAGHYLGSDSGLGRFLAYLMLFMGAMLGLVLAGNVLTMFVFWELTSVTSYLLIGYKHDYADARRGAL HSLLVTGGGGLALLVGLLLLGQAVGSYEFSDILAAGDTLHAHPLYPAAVILILLGCFTKSAQIPFHFWLPGAMQAPTPAS AFLHSATMVKAGVYLMARLSPALGGTALWDVTLAVVGGATMTFAAIVAMRQFDLKAMLAYTTISMLGALTMQIGLGGKYG AEGVATNILAHALYKSALFMLAGVIDHECGTRDLRRLGGLRKYMPQTMVITMLALLSFGGIPVMFGFVAKELMLEAALET ELGATLSVLAVAAIAITAIAYLITGWRLFSNAFLGQRSVAAMQQHITDPAPGMLIGPGVPAVLSLIIPIAFLGPISTLIA AASASIYGQPLDVKLALWHGINPALLVSLSAIVIGVVMFRFVDQLAGLRGWPAWSRGDMIFDRLIESTLTGATALTRTIQ EGRLRRYILLTALTMLVFVGVPFVSFGLGAIRFDLDPQLQLYEILAAALIPIGVIATINARTRLGAIIAVGVVGAMVSLL FVLFSAPDLALTQLLIEVLSTVFLLLVFSVLPVRFESFSSAWVRRRDAIVATVMGVLMGGLVLAAATNDSFAPLAPFFLE NSLELGKGANVVNVILVDFRGFDTMGEITVLFIALLGIYGLLRLRQGKDNATPERVTTTEPVNEPVDAQR
Specific function: Mrp complex is a Na(+)/H(+) antiporter that is considered to be the major Na(+) excretion system in B.subtilis. Has a major role in Na(+) resistance and a minor role in Na(+)- and K(+)-dependent pH homeostasis as compared to TetB. MrpA may be the actual N
COG id: COG1009
COG function: function code CP; NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit A family [H]
Homologues:
Organism=Homo sapiens, GI251831117, Length=361, Percent_Identity=33.5180055401662, Blast_Score=182, Evalue=8e-46, Organism=Escherichia coli, GI1788614, Length=338, Percent_Identity=34.0236686390533, Blast_Score=168, Evalue=1e-42, Organism=Escherichia coli, GI1788829, Length=395, Percent_Identity=32.4050632911392, Blast_Score=160, Evalue=4e-40, Organism=Escherichia coli, GI1788613, Length=383, Percent_Identity=28.1984334203655, Blast_Score=119, Evalue=6e-28, Organism=Escherichia coli, GI1788827, Length=314, Percent_Identity=27.7070063694268, Blast_Score=108, Evalue=9e-25, Organism=Escherichia coli, GI1788831, Length=346, Percent_Identity=28.3236994219653, Blast_Score=100, Evalue=5e-22, Organism=Escherichia coli, GI145693160, Length=302, Percent_Identity=26.4900662251656, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI2367154, Length=186, Percent_Identity=27.9569892473118, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005663 - InterPro: IPR001750 - InterPro: IPR001516 - InterPro: IPR018393 [H]
Pfam domain/function: PF00361 Oxidored_q1; PF00662 Oxidored_q1_N [H]
EC number: 1.6.99.5 [C]
Molecular weight: Translated: 83969; Mature: 83969
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYPLVFIALAAAPLALLARFPARDRIAWGLALIPLLIFGLTLAQAAPVWEGGLVTERIE CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH WVPALGLHLSFTLDGLSLLFALIISGIGTLIVGYAGHYLGSDSGLGRFLAYLMLFMGAML HHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH GLVLAGNVLTMFVFWELTSVTSYLLIGYKHDYADARRGALHSLLVTGGGGLALLVGLLLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHH GQAVGSYEFSDILAAGDTLHAHPLYPAAVILILLGCFTKSAQIPFHFWLPGAMQAPTPAS HHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHH AFLHSATMVKAGVYLMARLSPALGGTALWDVTLAVVGGATMTFAAIVAMRQFDLKAMLAY HHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH TTISMLGALTMQIGLGGKYGAEGVATNILAHALYKSALFMLAGVIDHECGTRDLRRLGGL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHH RKYMPQTMVITMLALLSFGGIPVMFGFVAKELMLEAALETELGATLSVLAVAAIAITAIA HHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH YLITGWRLFSNAFLGQRSVAAMQQHITDPAPGMLIGPGVPAVLSLIIPIAFLGPISTLIA HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH AASASIYGQPLDVKLALWHGINPALLVSLSAIVIGVVMFRFVDQLAGLRGWPAWSRGDMI HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH FDRLIESTLTGATALTRTIQEGRLRRYILLTALTMLVFVGVPFVSFGLGAIRFDLDPQLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHH LYEILAAALIPIGVIATINARTRLGAIIAVGVVGAMVSLLFVLFSAPDLALTQLLIEVLS HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TVFLLLVFSVLPVRFESFSSAWVRRRDAIVATVMGVLMGGLVLAAATNDSFAPLAPFFLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHH NSLELGKGANVVNVILVDFRGFDTMGEITVLFIALLGIYGLLRLRQGKDNATPERVTTTE CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PVNEPVDAQR CCCCCCCCCC >Mature Secondary Structure MIYPLVFIALAAAPLALLARFPARDRIAWGLALIPLLIFGLTLAQAAPVWEGGLVTERIE CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH WVPALGLHLSFTLDGLSLLFALIISGIGTLIVGYAGHYLGSDSGLGRFLAYLMLFMGAML HHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH GLVLAGNVLTMFVFWELTSVTSYLLIGYKHDYADARRGALHSLLVTGGGGLALLVGLLLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHH GQAVGSYEFSDILAAGDTLHAHPLYPAAVILILLGCFTKSAQIPFHFWLPGAMQAPTPAS HHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHH AFLHSATMVKAGVYLMARLSPALGGTALWDVTLAVVGGATMTFAAIVAMRQFDLKAMLAY HHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH TTISMLGALTMQIGLGGKYGAEGVATNILAHALYKSALFMLAGVIDHECGTRDLRRLGGL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHH RKYMPQTMVITMLALLSFGGIPVMFGFVAKELMLEAALETELGATLSVLAVAAIAITAIA HHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH YLITGWRLFSNAFLGQRSVAAMQQHITDPAPGMLIGPGVPAVLSLIIPIAFLGPISTLIA HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH AASASIYGQPLDVKLALWHGINPALLVSLSAIVIGVVMFRFVDQLAGLRGWPAWSRGDMI HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH FDRLIESTLTGATALTRTIQEGRLRRYILLTALTMLVFVGVPFVSFGLGAIRFDLDPQLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHH LYEILAAALIPIGVIATINARTRLGAIIAVGVVGAMVSLLFVLFSAPDLALTQLLIEVLS HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TVFLLLVFSVLPVRFESFSSAWVRRRDAIVATVMGVLMGGLVLAAATNDSFAPLAPFFLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHH NSLELGKGANVVNVILVDFRGFDTMGEITVLFIALLGIYGLLRLRQGKDNATPERVTTTE CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PVNEPVDAQR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Iron [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; ubiquinone [C]
Specific reaction: NADH + ubiquinone = NAD+ + ubiquinol [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377; 10198001; 11356194 [H]