| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525577
Identifier: 222525577
GI number: 222525577
Start: 2940637
End: 2942217
Strand: Direct
Name: 222525577
Synonym: Chy400_2326
Alternate gene names: NA
Gene position: 2940637-2942217 (Clockwise)
Preceding gene: 222525576
Following gene: 222525578
Centisome position: 55.81
GC content: 57.31
Gene sequence:
>1581_bases ATGCCGGTTACGCTGTCTTATCCGGGTGTGTACATTGAAGAGGTGCCGAGTGGCGTGCGCACTATCACCGGTGTGGCGAC ATCGATTACCGCCTTTGTTGGGCGGGCGCGGCGCGGCCCGGTGAATGATCCGGTACGGATTCAGAATTTTGGTGATTATG AGCGCCTCTTTGGTGGTTTGTGGGAAGCCAGTACGATGAGCTATGCGGTGCAACACTTTTTTCTCAATGGGGGTACCGAT GCGCTCATCGTGCGCCTGACCAACGGTGCGCAGCGGGCACAGTTCAGCCTCGCATCGGTCAGTGGGCCTGATAACCTGGT GTTGGAGGCGAGCAGTGAGGGTGCCTGGGGTAATGATTTGCGGATTGCGATTGATCACGATACCCGTCCTTTGAGCAGCG CCGAGGCTGATAAGGTCTTTAATCTGACCGTGGTTGAGGTTGTGCCGGGGAGCAATCCGTTGCAGGCGGCGCGGCGGGAA ACGTTCCGTAATGTCTCGATTGATCCGACGGCGCCGAGCTATGTGGGAACAGTGCTGGCTCAGGAGTCGCTGCTGTTACG GGTGCCCGATCCGTATCCCGGTACGTTCCCGACGGTGCGTCCGGCGGTTGCTGGCACAGCAGGTGATCTCAGTACCTTCA CCGCGCCAACGACGAACGGTTCTGATGGCAATCCACTGACCAGTGCGCAATACGAGGGTAGTTTTGATGATAAGACCGGT GTGTATGCTCTGCGAAAGGCCGATCTCTTCAATTTGCTCTGTATCCCGCCGTTTACCCGTGATACGGATGTGAGTGAGGC GGTCTGGACGAGGGCTCTGCAATTTTGCCGCTCGGAGCGGGCATTTCTGATCATCGATGCGCCATCTGGCTGGAAGAGTA TTGCAGCGGCGGTAAGTGGGATTGGTACGTTCAGTGCGGCAGTGGCGCGGGATGATCACGCGGCGATCTATTTTCCGCGG GTGCGGATACCCGATCCGTTGCGCGAGAATCGCCTGGAGGAATTTGCTCCCTGTGGTGCGGTTGCCGGTGTTTTTGCCCG TACTGACGCGCAGCGTGGGGTGTGGAAGGCACCGGCTGGTCAGGACGCGACCCTGTTCGGTGTGCGGGCGTTAGCCGTCA ATCTTACCGATGGCGAGCAAGGGCAGCTCAATCCGTTGGGAGTGAATTGTCTGCGTTCATTTCCGGTCAGTGGCAATGTG GTTTGGGGGGCACGCACGTACCGGGGTGCCGATCAGTTGGCGTCGGAATGGAAGTATATTCCGGTGCGTCGGCTGGCGTT GTTTATCGAAGAGACGCTCTACCGCAGTCTGCAATGGGTGGTCTTCGAGCCGAATGATGAACCGTTGTGGTCACAAATTC GCTTGAACGTCGGTGCCTTTATGCAAACGCTCTTTCGCCAGGGTGCGTTTCAAGGTCGCTCCCCGCGTGAAGCGTATCTG GTGAAGTGTGACCGTGAGACAACGACCCAAACCGACATCAATATGGGTGTGGTCAATATCGTGGTTGGGTTTGCGCCACT CAAACCGGCTGAATTTGTCATTATCAAGATTCAGCAGTTGGCCGGTCAGATTGCAGTCTGA
Upstream 100 bases:
>100_bases AGCGGTAGTACTGTTGCAAGCCGCGGAGTTGCGCTGATGAGATGGGGTGGGCTGGTGAGTCTGGGTGGCGGAGAGGTCGG TCTGTTCAAGGAGCAATTGT
Downstream 100 bases:
>100_bases TCGAAACTCTCTGCGGCTTGTCACTTCGGAGCGGGGTCGGGGGTGAGCGGTTGGATTTGCAGCGATAAGGGGACACTCTA TGGCTCAGTTTAGCGTGAAT
Product: tail sheath protein
Products: NA
Alternate protein names: Tail Sheath Protein; Phage Tail Sheath Protein FI; Tail Sheath Protein Gp; Phage Tail Sheath Family Protein; Phage Tail Sheath Protein FI-Like Protein; Phage Tail Sheath Protein Fi-Like Protein; LOW QUALITY PROTEIN Phage Tail Sheath Protein; Cytoplasmic Fibril Protein; Phage Tail Sheath Protein Fi-Like; Phage SPO1 DNA Polymerase-Related Protein; Bacteriophage Tail Sheath Protein; Phage Protein
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MPVTLSYPGVYIEEVPSGVRTITGVATSITAFVGRARRGPVNDPVRIQNFGDYERLFGGLWEASTMSYAVQHFFLNGGTD ALIVRLTNGAQRAQFSLASVSGPDNLVLEASSEGAWGNDLRIAIDHDTRPLSSAEADKVFNLTVVEVVPGSNPLQAARRE TFRNVSIDPTAPSYVGTVLAQESLLLRVPDPYPGTFPTVRPAVAGTAGDLSTFTAPTTNGSDGNPLTSAQYEGSFDDKTG VYALRKADLFNLLCIPPFTRDTDVSEAVWTRALQFCRSERAFLIIDAPSGWKSIAAAVSGIGTFSAAVARDDHAAIYFPR VRIPDPLRENRLEEFAPCGAVAGVFARTDAQRGVWKAPAGQDATLFGVRALAVNLTDGEQGQLNPLGVNCLRSFPVSGNV VWGARTYRGADQLASEWKYIPVRRLALFIEETLYRSLQWVVFEPNDEPLWSQIRLNVGAFMQTLFRQGAFQGRSPREAYL VKCDRETTTQTDINMGVVNIVVGFAPLKPAEFVIIKIQQLAGQIAV
Sequences:
>Translated_526_residues MPVTLSYPGVYIEEVPSGVRTITGVATSITAFVGRARRGPVNDPVRIQNFGDYERLFGGLWEASTMSYAVQHFFLNGGTD ALIVRLTNGAQRAQFSLASVSGPDNLVLEASSEGAWGNDLRIAIDHDTRPLSSAEADKVFNLTVVEVVPGSNPLQAARRE TFRNVSIDPTAPSYVGTVLAQESLLLRVPDPYPGTFPTVRPAVAGTAGDLSTFTAPTTNGSDGNPLTSAQYEGSFDDKTG VYALRKADLFNLLCIPPFTRDTDVSEAVWTRALQFCRSERAFLIIDAPSGWKSIAAAVSGIGTFSAAVARDDHAAIYFPR VRIPDPLRENRLEEFAPCGAVAGVFARTDAQRGVWKAPAGQDATLFGVRALAVNLTDGEQGQLNPLGVNCLRSFPVSGNV VWGARTYRGADQLASEWKYIPVRRLALFIEETLYRSLQWVVFEPNDEPLWSQIRLNVGAFMQTLFRQGAFQGRSPREAYL VKCDRETTTQTDINMGVVNIVVGFAPLKPAEFVIIKIQQLAGQIAV >Mature_525_residues PVTLSYPGVYIEEVPSGVRTITGVATSITAFVGRARRGPVNDPVRIQNFGDYERLFGGLWEASTMSYAVQHFFLNGGTDA LIVRLTNGAQRAQFSLASVSGPDNLVLEASSEGAWGNDLRIAIDHDTRPLSSAEADKVFNLTVVEVVPGSNPLQAARRET FRNVSIDPTAPSYVGTVLAQESLLLRVPDPYPGTFPTVRPAVAGTAGDLSTFTAPTTNGSDGNPLTSAQYEGSFDDKTGV YALRKADLFNLLCIPPFTRDTDVSEAVWTRALQFCRSERAFLIIDAPSGWKSIAAAVSGIGTFSAAVARDDHAAIYFPRV RIPDPLRENRLEEFAPCGAVAGVFARTDAQRGVWKAPAGQDATLFGVRALAVNLTDGEQGQLNPLGVNCLRSFPVSGNVV WGARTYRGADQLASEWKYIPVRRLALFIEETLYRSLQWVVFEPNDEPLWSQIRLNVGAFMQTLFRQGAFQGRSPREAYLV KCDRETTTQTDINMGVVNIVVGFAPLKPAEFVIIKIQQLAGQIAV
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57155; Mature: 57024
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTLSYPGVYIEEVPSGVRTITGVATSITAFVGRARRGPVNDPVRIQNFGDYERLFGGL CCEEECCCCEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHH WEASTMSYAVQHFFLNGGTDALIVRLTNGAQRAQFSLASVSGPDNLVLEASSEGAWGNDL HHHHHHHHHHHHHEECCCCCEEEEEECCCCCHHEEEEEECCCCCCEEEEECCCCCCCCCE RIAIDHDTRPLSSAEADKVFNLTVVEVVPGSNPLQAARRETFRNVSIDPTAPSYVGTVLA EEEEECCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH QESLLLRVPDPYPGTFPTVRPAVAGTAGDLSTFTAPTTNGSDGNPLTSAQYEGSFDDKTG CCCEEEECCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC VYALRKADLFNLLCIPPFTRDTDVSEAVWTRALQFCRSERAFLIIDAPSGWKSIAAAVSG EEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHC IGTFSAAVARDDHAAIYFPRVRIPDPLRENRLEEFAPCGAVAGVFARTDAQRGVWKAPAG CHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC QDATLFGVRALAVNLTDGEQGQLNPLGVNCLRSFPVSGNVVWGARTYRGADQLASEWKYI CCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCHHHHHHCCCCC PVRRLALFIEETLYRSLQWVVFEPNDEPLWSQIRLNVGAFMQTLFRQGAFQGRSPREAYL HHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE VKCDRETTTQTDINMGVVNIVVGFAPLKPAEFVIIKIQQLAGQIAV EEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEHHCCCCCC >Mature Secondary Structure PVTLSYPGVYIEEVPSGVRTITGVATSITAFVGRARRGPVNDPVRIQNFGDYERLFGGL CEEECCCCEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHH WEASTMSYAVQHFFLNGGTDALIVRLTNGAQRAQFSLASVSGPDNLVLEASSEGAWGNDL HHHHHHHHHHHHHEECCCCCEEEEEECCCCCHHEEEEEECCCCCCEEEEECCCCCCCCCE RIAIDHDTRPLSSAEADKVFNLTVVEVVPGSNPLQAARRETFRNVSIDPTAPSYVGTVLA EEEEECCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH QESLLLRVPDPYPGTFPTVRPAVAGTAGDLSTFTAPTTNGSDGNPLTSAQYEGSFDDKTG CCCEEEECCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC VYALRKADLFNLLCIPPFTRDTDVSEAVWTRALQFCRSERAFLIIDAPSGWKSIAAAVSG EEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHC IGTFSAAVARDDHAAIYFPRVRIPDPLRENRLEEFAPCGAVAGVFARTDAQRGVWKAPAG CHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC QDATLFGVRALAVNLTDGEQGQLNPLGVNCLRSFPVSGNVVWGARTYRGADQLASEWKYI CCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCHHHHHHCCCCC PVRRLALFIEETLYRSLQWVVFEPNDEPLWSQIRLNVGAFMQTLFRQGAFQGRSPREAYL HHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE VKCDRETTTQTDINMGVVNIVVGFAPLKPAEFVIIKIQQLAGQIAV EEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA