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The map label for this gene is 222525557

Identifier: 222525557

GI number: 222525557

Start: 2919543

End: 2920382

Strand: Direct

Name: 222525557

Synonym: Chy400_2306

Alternate gene names: NA

Gene position: 2919543-2920382 (Clockwise)

Preceding gene: 222525556

Following gene: 222525558

Centisome position: 55.41

GC content: 54.52

Gene sequence:

>840_bases
ATGAAGTGCCGGACGTTCATCACGCTGATTGGCTGGTTCGCCATCTTGTTGCTGGCACCCGCAGTGGTGTCAGCGCAAGG
TGGCCGCCCAAATCCGGCTGATAATGTCGCTTTCGAGCAGCGCATGGGCGAACAGGTGCCGCTCGATGCCGTCTTTATCG
ATGAGCAAGGGGAGCAGGTTCGCCTGGAGCAGTTCTTCACTTCCGGCCAGCCGGTTGTGCTGGTGATGAGTTACTACGAG
TGCCCCATGCTCTGTTCGTTTGTGCGCGAAGGGGTGCTGGCGGCACTGCAACAGGTGACGCTTACCGCTGGACGTGATTT
TCAGGTGATCAATATCAGTATTGATCCACTTGAGACGCCAATGATGGCGGCCAATGTGAAAACGTTGACTTTGCAACGCT
ATGCCCGGCCCGATGCCGAACAGGGATGGCATTTTCTGACCGGTAGTGAGGAGCAGATCCGGCGTGTTGCTGATGCCATT
GGTTTCAGGTATGTCTATGACGAAACCATCGATCAGTACGCGCACGCGGCCGGATTCGTTGTGCTGACCCCAGAAGGTAA
AACGGCTCGTTACTTCTTTGGGATTGAGTTTAATGCCTCTGATGTGCGGCTTGGGATTGTTGAGGCATCGTCTGGTAAGG
TCGGTAGTGCGATTGATCAGATTTTGCTACTGTGCTACCAGTACAATCCGGTTACCGGTAGTTATACTCCGGCGATTATG
ACGATCCTACGGATTGCCGGTGTCCTGACGGTGATCGGGATTATTACGCTGATTGTGACGTTGAGTCGTTCAACACCCGG
CGGTAATTTGCCGCCACCACGTGAATCGGTGCCGGCTTAG

Upstream 100 bases:

>100_bases
TGCGCATATTCCTATCGAGCGAGCGATGGAATTAATCCTTGAACACGGCCTGGATGCCGTAAAGTAGCCGGTATCAATCA
CTAGATCGTGAGATGTTGTC

Downstream 100 bases:

>100_bases
TGGTAGTTGCGACTGGGGCGGCAATGCCCCCGGACAGGACGAAGGTATGCGCGATTTTCCGTTATTTCCCGATCAGGCAT
CAACCTTTGCAACCCAGGTT

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: SCO1/SenC Family Protein; SCO1/SenC/PrrC Family Protein; SenC/PrrC; Cytochrome C Oxidase Synthesis Factor; SenC/PrrC-Like; Respiratory System Biogenesis Protein

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKCRTFITLIGWFAILLLAPAVVSAQGGRPNPADNVAFEQRMGEQVPLDAVFIDEQGEQVRLEQFFTSGQPVVLVMSYYE
CPMLCSFVREGVLAALQQVTLTAGRDFQVINISIDPLETPMMAANVKTLTLQRYARPDAEQGWHFLTGSEEQIRRVADAI
GFRYVYDETIDQYAHAAGFVVLTPEGKTARYFFGIEFNASDVRLGIVEASSGKVGSAIDQILLLCYQYNPVTGSYTPAIM
TILRIAGVLTVIGIITLIVTLSRSTPGGNLPPPRESVPA

Sequences:

>Translated_279_residues
MKCRTFITLIGWFAILLLAPAVVSAQGGRPNPADNVAFEQRMGEQVPLDAVFIDEQGEQVRLEQFFTSGQPVVLVMSYYE
CPMLCSFVREGVLAALQQVTLTAGRDFQVINISIDPLETPMMAANVKTLTLQRYARPDAEQGWHFLTGSEEQIRRVADAI
GFRYVYDETIDQYAHAAGFVVLTPEGKTARYFFGIEFNASDVRLGIVEASSGKVGSAIDQILLLCYQYNPVTGSYTPAIM
TILRIAGVLTVIGIITLIVTLSRSTPGGNLPPPRESVPA
>Mature_279_residues
MKCRTFITLIGWFAILLLAPAVVSAQGGRPNPADNVAFEQRMGEQVPLDAVFIDEQGEQVRLEQFFTSGQPVVLVMSYYE
CPMLCSFVREGVLAALQQVTLTAGRDFQVINISIDPLETPMMAANVKTLTLQRYARPDAEQGWHFLTGSEEQIRRVADAI
GFRYVYDETIDQYAHAAGFVVLTPEGKTARYFFGIEFNASDVRLGIVEASSGKVGSAIDQILLLCYQYNPVTGSYTPAIM
TILRIAGVLTVIGIITLIVTLSRSTPGGNLPPPRESVPA

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30558; Mature: 30558

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCRTFITLIGWFAILLLAPAVVSAQGGRPNPADNVAFEQRMGEQVPLDAVFIDEQGEQV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCEE
RLEQFFTSGQPVVLVMSYYECPMLCSFVREGVLAALQQVTLTAGRDFQVINISIDPLETP
EHHHHHCCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
MMAANVKTLTLQRYARPDAEQGWHFLTGSEEQIRRVADAIGFRYVYDETIDQYAHAAGFV
HHHCCHHHEEHHHHCCCCHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
VLTPEGKTARYFFGIEFNASDVRLGIVEASSGKVGSAIDQILLLCYQYNPVTGSYTPAIM
EECCCCCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH
TILRIAGVLTVIGIITLIVTLSRSTPGGNLPPPRESVPA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKCRTFITLIGWFAILLLAPAVVSAQGGRPNPADNVAFEQRMGEQVPLDAVFIDEQGEQV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCEE
RLEQFFTSGQPVVLVMSYYECPMLCSFVREGVLAALQQVTLTAGRDFQVINISIDPLETP
EHHHHHCCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
MMAANVKTLTLQRYARPDAEQGWHFLTGSEEQIRRVADAIGFRYVYDETIDQYAHAAGFV
HHHCCHHHEEHHHHCCCCHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
VLTPEGKTARYFFGIEFNASDVRLGIVEASSGKVGSAIDQILLLCYQYNPVTGSYTPAIM
EECCCCCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH
TILRIAGVLTVIGIITLIVTLSRSTPGGNLPPPRESVPA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA