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The map label for this gene is rfbA [H]

Identifier: 222525522

GI number: 222525522

Start: 2873887

End: 2874774

Strand: Direct

Name: rfbA [H]

Synonym: Chy400_2271

Alternate gene names: 222525522

Gene position: 2873887-2874774 (Clockwise)

Preceding gene: 222525514

Following gene: 222525523

Centisome position: 54.54

GC content: 54.05

Gene sequence:

>888_bases
ATGGCAATTCTTGAACCCTCCAGCACGTCGGCAGTCAACCCCTCTACAGCACATTCATCAGCAGAAGATGTGCAGGCACC
AACGATTATCGAGCCGCGCAAGGGATGGTGGCATTTCAACTGGCGTGACCTTTGGGCTTACCGCGAACTACTCTTTTTTC
TGGTCTGGCGTGATGTTAAGGTACGTTACAAGCAGACACTGCTGGGCGCCAGTTGGGCCATCATTCAACCAACGTTACAG
CTCGTCGTCTTCACGATCATCTTTGGGCGGTTGGCCGGTGTCAATACGAACGGTATTCCTTACCCGCTCTTCAATCTGGC
CGGCCTGCTACCATGGCAGTTCTTTGCCAACACGGTTGGGCAGGCGGCCAATAGTCTGGTAGGCAGTGCCAGTATCGTAC
GCAAAGTCTACTTCCCCCGGCTGGCAATTCCTACCGCCAGTGTTCTGGCCGGTGTGGTTGATTTTGGTTTGTCATTTCTC
ATCCTGCTGGCATTGATGGTGTGGTACCGGTGGCCGCCAACCCCGGCAATGTTCCTCTTGCCGCTCTTTCTGTTGCTGGC
AATGTTTACTGCCATGGGCGTGGGATTCTGGCTCTCGGCGATCAACGCCCGCTACCGTGATGTGCGGCACGCTACTCCGT
TTCTCATCCAACTCTGGCTGTTTGCCACGCCGGTCGTGTATCCGAGCAATCTGGTGGAAGGGTACTGGCAATTTCTCTAC
GCGCTCAACCCAATGGTGAGCGTTGTCGAAGGTTTTCGCTGGGCATTGCTGGGAACGCAACCTCCCGGTCTCTTGATGCT
GATCTCGGTCATGATGGCAGTAACAATATTCAGTTCCGGTTTGTTCTACTTTCAGGCGGTGGAACGTAAGTTTGCCGATA
TTATCTAG

Upstream 100 bases:

>100_bases
TTTCTAACCAAATGTAAACGAAGAACGCGCTGCCACAATACCTCTTCGCTCCTGCTCTGGCAATATTGCGCAGATGAATG
TTACGGATGATGTGAGCACT

Downstream 100 bases:

>100_bases
CCTATGCACTACGCAATTCGGGCCCGTGATTTAGCAAAACAGTATCGGATCGGTGCGATCAGGCAGCGTGATATGGGATA
CGTCACGCTACGCGATGCCA

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MAILEPSSTSAVNPSTAHSSAEDVQAPTIIEPRKGWWHFNWRDLWAYRELLFFLVWRDVKVRYKQTLLGASWAIIQPTLQ
LVVFTIIFGRLAGVNTNGIPYPLFNLAGLLPWQFFANTVGQAANSLVGSASIVRKVYFPRLAIPTASVLAGVVDFGLSFL
ILLALMVWYRWPPTPAMFLLPLFLLLAMFTAMGVGFWLSAINARYRDVRHATPFLIQLWLFATPVVYPSNLVEGYWQFLY
ALNPMVSVVEGFRWALLGTQPPGLLMLISVMMAVTIFSSGLFYFQAVERKFADII

Sequences:

>Translated_295_residues
MAILEPSSTSAVNPSTAHSSAEDVQAPTIIEPRKGWWHFNWRDLWAYRELLFFLVWRDVKVRYKQTLLGASWAIIQPTLQ
LVVFTIIFGRLAGVNTNGIPYPLFNLAGLLPWQFFANTVGQAANSLVGSASIVRKVYFPRLAIPTASVLAGVVDFGLSFL
ILLALMVWYRWPPTPAMFLLPLFLLLAMFTAMGVGFWLSAINARYRDVRHATPFLIQLWLFATPVVYPSNLVEGYWQFLY
ALNPMVSVVEGFRWALLGTQPPGLLMLISVMMAVTIFSSGLFYFQAVERKFADII
>Mature_294_residues
AILEPSSTSAVNPSTAHSSAEDVQAPTIIEPRKGWWHFNWRDLWAYRELLFFLVWRDVKVRYKQTLLGASWAIIQPTLQL
VVFTIIFGRLAGVNTNGIPYPLFNLAGLLPWQFFANTVGQAANSLVGSASIVRKVYFPRLAIPTASVLAGVVDFGLSFLI
LLALMVWYRWPPTPAMFLLPLFLLLAMFTAMGVGFWLSAINARYRDVRHATPFLIQLWLFATPVVYPSNLVEGYWQFLYA
LNPMVSVVEGFRWALLGTQPPGLLMLISVMMAVTIFSSGLFYFQAVERKFADII

Specific function: May form an ATP-driven O-antigen export apparatus, in association with rfbB [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 33261; Mature: 33129

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILEPSSTSAVNPSTAHSSAEDVQAPTIIEPRKGWWHFNWRDLWAYRELLFFLVWRDVK
CCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCEEECCHHHHHHHHHHHHHHHHHHHH
VRYKQTLLGASWAIIQPTLQLVVFTIIFGRLAGVNTNGIPYPLFNLAGLLPWQFFANTVG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QAANSLVGSASIVRKVYFPRLAIPTASVLAGVVDFGLSFLILLALMVWYRWPPTPAMFLL
HHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
PLFLLLAMFTAMGVGFWLSAINARYRDVRHATPFLIQLWLFATPVVYPSNLVEGYWQFLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ALNPMVSVVEGFRWALLGTQPPGLLMLISVMMAVTIFSSGLFYFQAVERKFADII
HHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AILEPSSTSAVNPSTAHSSAEDVQAPTIIEPRKGWWHFNWRDLWAYRELLFFLVWRDVK
CCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCEEECCHHHHHHHHHHHHHHHHHHHH
VRYKQTLLGASWAIIQPTLQLVVFTIIFGRLAGVNTNGIPYPLFNLAGLLPWQFFANTVG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QAANSLVGSASIVRKVYFPRLAIPTASVLAGVVDFGLSFLILLALMVWYRWPPTPAMFLL
HHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
PLFLLLAMFTAMGVGFWLSAINARYRDVRHATPFLIQLWLFATPVVYPSNLVEGYWQFLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ALNPMVSVVEGFRWALLGTQPPGLLMLISVMMAVTIFSSGLFYFQAVERKFADII
HHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8626291 [H]