| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is purH [H]
Identifier: 222525471
GI number: 222525471
Start: 2812272
End: 2813789
Strand: Reverse
Name: purH [H]
Synonym: Chy400_2219
Alternate gene names: 222525471
Gene position: 2813789-2812272 (Counterclockwise)
Preceding gene: 222525472
Following gene: 222525470
Centisome position: 53.4
GC content: 57.64
Gene sequence:
>1518_bases GTGCGCGCATTGATGAGCGTCTACGATAAAACGGGGATTGTCGAATTTGCTCAGGCTCTCCACAATCTTGGCATTGAGAT TATCTCAACCGGTCAGACCCAACGTGTATTACGTGAAGCAGGTATCCCGGCTCTACCTGTCAGTGACGTCACCGGTTTTC CCGAAATTCTTGATGGCCGGGTGAAAACGCTCCATCCTGCAATTCACGCCGGCTTGCTGGCGCGCCGTGATGTGCCGGCT CATATGGCCGAACTGGCTGCCCATAATCTACAACCAATTGATCTAGTCGTAGTAAACCTCTACCCCTTCGCCGCTACCAT TGCCCGCCCCGACGTGACAATGGCTGAAGCGCAAGAGCAGATTGACATCGGCGGTGTTGCATTGCTACGGGCGGCGGCCA AGAATTTCCCGGCAGTGCTGGTACTGGTCGATCCGGCCGACTATGCCGGCGTGCTCGATGGCTTACGCGCTGGCGATGTG CCATTGAGCGAACGACAGCGCCTGGCCGCAAAGGCGTTTGCCCATACCGCTGAGTACGATGCGACCATTGCCGCATATCT CCGCACCGAGCCACTGCCCGATGTGCTGCCGTTGGCCTGGCGAAAATATCAGCCTCTGCGCTACGGCGAAAATCCTCACC AGGCCGCTGCCCTGTACGGTGATTTTGGTGCCTTCTTCCATCAGTTGCACGGCAAAGAGCTAAGTTATAACAATATTCTT GATACTGCCGCCGCGCAGGAGTTGATTGAAGAGTTTCCTGCGACTGAAGCGGCTGCGGTTGCCATCATTAAACACACCAA TCCGTGTGGTGTAGCTATCGCTGCCGATCTCCATAGGGCCTGGGAAGCAGCATTTGCCACCGACCGCGAAGCTCCGTTCG GTGGCATTATTGCGGTCAACCGACCAGTCGATATCGCGTTTGCCGAAGCGGTAGATGAAATCTTCTCGGAAATCATTATC GCACCTGATTTTGCCCCCGATGCCCTGGCCTTGCTCCGACGCAAGAAGAATCGGCGGCTGCTCCAAAGCGTGCGCCCGAT TACCGGTGCTGATCGCTGGCAACTGCGGAGCGTTCCCGGCGGTGTGTTGGTGCAAGAACCTGATCATGCTCCTCTGGTTG CTGAAGAGTGGCGTGTCGTCACCAAACGTGCCCCAACCGATGCCGAAGCTGCTGCGCTCCGCTTCGCCTGGCGCGTAGTA AAACACGTGAAGTCAAATGCGATTGTGTATGCAGCTCATGACCGCACTCTTGGCATCGGTGCCGGACAGATGAGCCGGGT AGATAGCTCGCGCCTGGCTGTCTGGAAAGCCCAACAGGCCGGGATCGATCTGCGAGGCAGTGTCGTGGCAAGCGATGCGC TCTTTCCCTTTGCTGATGGTGTTGAAGCGGCAATTGCTGCCGGTGCCACCGCCATTATTCAGCCCGGTGGCTCGGTACGC GACGAAGAGGTGATCGCTGCGGCTGATGCCGCTGGCGCGGCGATGGTCTTTACCGGACGCCGCCATTTCCGCCATTAG
Upstream 100 bases:
>100_bases GCTCGTTTGATCTGTGGTACAATGGGGCTACGCGACCCTGCCCGTCGCTGCGGGCAGGGTTTCGCTTTGGGTTGTCTCTG TGATTGGTGAGGAGCGTGTT
Downstream 100 bases:
>100_bases ATACACTGACAACCGTTACATAGCTGCCTTACAGAATATAAGGAGGTACACCGGACGCATGGTGTCCATAAGTGATACAG AACTACTACCAGCTATCGTA
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MRALMSVYDKTGIVEFAQALHNLGIEIISTGQTQRVLREAGIPALPVSDVTGFPEILDGRVKTLHPAIHAGLLARRDVPA HMAELAAHNLQPIDLVVVNLYPFAATIARPDVTMAEAQEQIDIGGVALLRAAAKNFPAVLVLVDPADYAGVLDGLRAGDV PLSERQRLAAKAFAHTAEYDATIAAYLRTEPLPDVLPLAWRKYQPLRYGENPHQAAALYGDFGAFFHQLHGKELSYNNIL DTAAAQELIEEFPATEAAAVAIIKHTNPCGVAIAADLHRAWEAAFATDREAPFGGIIAVNRPVDIAFAEAVDEIFSEIII APDFAPDALALLRRKKNRRLLQSVRPITGADRWQLRSVPGGVLVQEPDHAPLVAEEWRVVTKRAPTDAEAAALRFAWRVV KHVKSNAIVYAAHDRTLGIGAGQMSRVDSSRLAVWKAQQAGIDLRGSVVASDALFPFADGVEAAIAAGATAIIQPGGSVR DEEVIAAADAAGAAMVFTGRRHFRH
Sequences:
>Translated_505_residues MRALMSVYDKTGIVEFAQALHNLGIEIISTGQTQRVLREAGIPALPVSDVTGFPEILDGRVKTLHPAIHAGLLARRDVPA HMAELAAHNLQPIDLVVVNLYPFAATIARPDVTMAEAQEQIDIGGVALLRAAAKNFPAVLVLVDPADYAGVLDGLRAGDV PLSERQRLAAKAFAHTAEYDATIAAYLRTEPLPDVLPLAWRKYQPLRYGENPHQAAALYGDFGAFFHQLHGKELSYNNIL DTAAAQELIEEFPATEAAAVAIIKHTNPCGVAIAADLHRAWEAAFATDREAPFGGIIAVNRPVDIAFAEAVDEIFSEIII APDFAPDALALLRRKKNRRLLQSVRPITGADRWQLRSVPGGVLVQEPDHAPLVAEEWRVVTKRAPTDAEAAALRFAWRVV KHVKSNAIVYAAHDRTLGIGAGQMSRVDSSRLAVWKAQQAGIDLRGSVVASDALFPFADGVEAAIAAGATAIIQPGGSVR DEEVIAAADAAGAAMVFTGRRHFRH >Mature_505_residues MRALMSVYDKTGIVEFAQALHNLGIEIISTGQTQRVLREAGIPALPVSDVTGFPEILDGRVKTLHPAIHAGLLARRDVPA HMAELAAHNLQPIDLVVVNLYPFAATIARPDVTMAEAQEQIDIGGVALLRAAAKNFPAVLVLVDPADYAGVLDGLRAGDV PLSERQRLAAKAFAHTAEYDATIAAYLRTEPLPDVLPLAWRKYQPLRYGENPHQAAALYGDFGAFFHQLHGKELSYNNIL DTAAAQELIEEFPATEAAAVAIIKHTNPCGVAIAADLHRAWEAAFATDREAPFGGIIAVNRPVDIAFAEAVDEIFSEIII APDFAPDALALLRRKKNRRLLQSVRPITGADRWQLRSVPGGVLVQEPDHAPLVAEEWRVVTKRAPTDAEAAALRFAWRVV KHVKSNAIVYAAHDRTLGIGAGQMSRVDSSRLAVWKAQQAGIDLRGSVVASDALFPFADGVEAAIAAGATAIIQPGGSVR DEEVIAAADAAGAAMVFTGRRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=517, Percent_Identity=37.330754352031, Blast_Score=272, Evalue=6e-73, Organism=Escherichia coli, GI1790439, Length=529, Percent_Identity=49.5274102079395, Blast_Score=459, Evalue=1e-130, Organism=Caenorhabditis elegans, GI71985564, Length=503, Percent_Identity=34.9900596421471, Blast_Score=262, Evalue=4e-70, Organism=Caenorhabditis elegans, GI71985574, Length=335, Percent_Identity=28.3582089552239, Blast_Score=105, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6323056, Length=458, Percent_Identity=37.9912663755458, Blast_Score=267, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6323768, Length=461, Percent_Identity=36.6594360086768, Blast_Score=259, Evalue=1e-69, Organism=Drosophila melanogaster, GI24649832, Length=591, Percent_Identity=33.8409475465313, Blast_Score=267, Evalue=1e-71,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 54268; Mature: 54268
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALMSVYDKTGIVEFAQALHNLGIEIISTGQTQRVLREAGIPALPVSDVTGFPEILDGR CCHHHHHHHHCCHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHCCC VKTLHPAIHAGLLARRDVPAHMAELAAHNLQPIDLVVVNLYPFAATIARPDVTMAEAQEQ HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEHHHHHHHCCCCCHHHHHHHH IDIGGVALLRAAAKNFPAVLVLVDPADYAGVLDGLRAGDVPLSERQRLAAKAFAHTAEYD CCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC ATIAAYLRTEPLPDVLPLAWRKYQPLRYGENPHQAAALYGDFGAFFHQLHGKELSYNNIL HHHEEEHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH DTAAAQELIEEFPATEAAAVAIIKHTNPCGVAIAADLHRAWEAAFATDREAPFGGIIAVN HHHHHHHHHHHCCCCCHHEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCEEEEC RPVDIAFAEAVDEIFSEIIIAPDFAPDALALLRRKKNRRLLQSVRPITGADRWQLRSVPG CCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC GVLVQEPDHAPLVAEEWRVVTKRAPTDAEAAALRFAWRVVKHVKSNAIVYAAHDRTLGIG CEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECC AGQMSRVDSSRLAVWKAQQAGIDLRGSVVASDALFPFADGVEAAIAAGATAIIQPGGSVR CCHHHHCCCCHHEEEEHHHCCCCCCCCEEECCCCCCCCCCHHHHHHCCCEEEECCCCCCC DEEVIAAADAAGAAMVFTGRRHFRH CCHHEEECCCCCEEEEEECHHHCCC >Mature Secondary Structure MRALMSVYDKTGIVEFAQALHNLGIEIISTGQTQRVLREAGIPALPVSDVTGFPEILDGR CCHHHHHHHHCCHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHCCC VKTLHPAIHAGLLARRDVPAHMAELAAHNLQPIDLVVVNLYPFAATIARPDVTMAEAQEQ HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEHHHHHHHCCCCCHHHHHHHH IDIGGVALLRAAAKNFPAVLVLVDPADYAGVLDGLRAGDVPLSERQRLAAKAFAHTAEYD CCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC ATIAAYLRTEPLPDVLPLAWRKYQPLRYGENPHQAAALYGDFGAFFHQLHGKELSYNNIL HHHEEEHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH DTAAAQELIEEFPATEAAAVAIIKHTNPCGVAIAADLHRAWEAAFATDREAPFGGIIAVN HHHHHHHHHHHCCCCCHHEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCEEEEC RPVDIAFAEAVDEIFSEIIIAPDFAPDALALLRRKKNRRLLQSVRPITGADRWQLRSVPG CCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC GVLVQEPDHAPLVAEEWRVVTKRAPTDAEAAALRFAWRVVKHVKSNAIVYAAHDRTLGIG CEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECC AGQMSRVDSSRLAVWKAQQAGIDLRGSVVASDALFPFADGVEAAIAAGATAIIQPGGSVR CCHHHHCCCCHHEEEEHHHCCCCCCCCEEECCCCCCCCCCHHHHHHCCCEEEECCCCCCC DEEVIAAADAAGAAMVFTGRRHFRH CCHHEEECCCCCEEEEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA