| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is ykuE [H]
Identifier: 222525444
GI number: 222525444
Start: 2775987
End: 2777018
Strand: Reverse
Name: ykuE [H]
Synonym: Chy400_2192
Alternate gene names: 222525444
Gene position: 2777018-2775987 (Counterclockwise)
Preceding gene: 222525453
Following gene: 222525437
Centisome position: 52.71
GC content: 59.98
Gene sequence:
>1032_bases ATGACAACCACGCTACCATCAATTCGCAAGCAGCGAGATCGGCAACCACGCCTGCGTTATTCACCGCGCTGGATTGGGGC AGGGCTGGCCGGGAGCGTCCTGGCGGGTGTAGCCGGTTTCTACGGTGGATTACCGATCACGCTCGCGCTGGCGGGCGCAG GTGCAATGAGTGCAGGCTATGCCCTTACCATCGAACCCCGGCGGATCCGGCTGACGGTGAAAGACCTGTCTTTTGAGCAC CTGCCATCTGGGTTGGATGGTTTGACTATCGGGCAGTTGAGTGATCTGCATCTTGGTCATCGCTACAGTTTCACAAACGC GCATCAGGCGATTGATCAACTGCTGGCGACACAGCCCGAAATCATTGTATTGACCGGCGATCTGGTGCAAACGCGCGCCG CGATCAGTCGGTTGCCTGATGTGCTGCGTCGATTGCATGCCCCGCTTGGGGTTTACGCCGTACCTGGCAATCACGATTAT TGGGAAGGGATGCCGCATATTGCGACCATGTTACGCGAACACGGCATTCAGTTGCTGATCAACCGCCATCGCCTGATCGA GCGTCAGGGCGCTCGTCTGTTGCTGGCCGGGGTTGATGACCACTGGGATGGCAGTCCCGATCTGGAATTGGCAGTAGGTG GCGCCCCAGCCCACGACTTCCGCATCCTGCTCGCTCACTGTCCCGATATTGCCGATGAAGCCGCCACAGCCGGCTTTCAT CTCCAGCTCTCCGGCCATACCCACGGCGGCCACGTGCGATTGCCTGGTTTAGGGCCGCTCTGCCTGCCACGCCACGGATG GCGCTACGACATGGGACATTTTCAGGTTGGTTCGATGCACCTGTTTGTCAGTCGTGGGATCAGCGGCCTGCCGCTCCGCC TCGGTTGTCCACCCGAAGTCAATCTGTTCCAGTTGCGTCGGATCGCCGCCGAAACTGGCGACGCACAAAGCGCCACATTG CGCGCACACGGCGATCACGGCGAAGCAGCCAGATTCCAACGACCATCAGCGGGATCGCCGGCCAGAGATTAA
Upstream 100 bases:
>100_bases GCGAGGGGGAGAGAGTACGCAGGATGGGCTGCCAATGCAAGAGATGCCTGTCCTGCGTCCTCTTTGTACGACAGATTCGT CGTCGACTCAAGGATGTGCT
Downstream 100 bases:
>100_bases CCGGCGACGTACCGTGGCGAAAGGCGGGCAGATTGGCAACCAGCCAGATACACAGGGCGCCCAAATAGCCGGCGATACCG GCTTTGATCCCAACCAGCAG
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MTTTLPSIRKQRDRQPRLRYSPRWIGAGLAGSVLAGVAGFYGGLPITLALAGAGAMSAGYALTIEPRRIRLTVKDLSFEH LPSGLDGLTIGQLSDLHLGHRYSFTNAHQAIDQLLATQPEIIVLTGDLVQTRAAISRLPDVLRRLHAPLGVYAVPGNHDY WEGMPHIATMLREHGIQLLINRHRLIERQGARLLLAGVDDHWDGSPDLELAVGGAPAHDFRILLAHCPDIADEAATAGFH LQLSGHTHGGHVRLPGLGPLCLPRHGWRYDMGHFQVGSMHLFVSRGISGLPLRLGCPPEVNLFQLRRIAAETGDAQSATL RAHGDHGEAARFQRPSAGSPARD
Sequences:
>Translated_343_residues MTTTLPSIRKQRDRQPRLRYSPRWIGAGLAGSVLAGVAGFYGGLPITLALAGAGAMSAGYALTIEPRRIRLTVKDLSFEH LPSGLDGLTIGQLSDLHLGHRYSFTNAHQAIDQLLATQPEIIVLTGDLVQTRAAISRLPDVLRRLHAPLGVYAVPGNHDY WEGMPHIATMLREHGIQLLINRHRLIERQGARLLLAGVDDHWDGSPDLELAVGGAPAHDFRILLAHCPDIADEAATAGFH LQLSGHTHGGHVRLPGLGPLCLPRHGWRYDMGHFQVGSMHLFVSRGISGLPLRLGCPPEVNLFQLRRIAAETGDAQSATL RAHGDHGEAARFQRPSAGSPARD >Mature_342_residues TTTLPSIRKQRDRQPRLRYSPRWIGAGLAGSVLAGVAGFYGGLPITLALAGAGAMSAGYALTIEPRRIRLTVKDLSFEHL PSGLDGLTIGQLSDLHLGHRYSFTNAHQAIDQLLATQPEIIVLTGDLVQTRAAISRLPDVLRRLHAPLGVYAVPGNHDYW EGMPHIATMLREHGIQLLINRHRLIERQGARLLLAGVDDHWDGSPDLELAVGGAPAHDFRILLAHCPDIADEAATAGFHL QLSGHTHGGHVRLPGLGPLCLPRHGWRYDMGHFQVGSMHLFVSRGISGLPLRLGCPPEVNLFQLRRIAAETGDAQSATLR AHGDHGEAARFQRPSAGSPARD
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Homo sapiens, GI210031210, Length=292, Percent_Identity=29.7945205479452, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI210031196, Length=292, Percent_Identity=29.7945205479452, Blast_Score=86, Evalue=4e-17, Organism=Escherichia coli, GI87081695, Length=253, Percent_Identity=31.2252964426877, Blast_Score=93, Evalue=2e-20, Organism=Caenorhabditis elegans, GI115535028, Length=232, Percent_Identity=29.3103448275862, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI115535030, Length=180, Percent_Identity=32.2222222222222, Blast_Score=71, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR006311 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 37165; Mature: 37034
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTLPSIRKQRDRQPRLRYSPRWIGAGLAGSVLAGVAGFYGGLPITLALAGAGAMSAGY CCCCCCHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCE ALTIEPRRIRLTVKDLSFEHLPSGLDGLTIGQLSDLHLGHRYSFTNAHQAIDQLLATQPE EEEECCCEEEEEEECCCHHHCCCCCCCCEECCCCCCCCCCEECCCHHHHHHHHHHHCCCC IIVLTGDLVQTRAAISRLPDVLRRLHAPLGVYAVPGNHDYWEGMPHIATMLREHGIQLLI EEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCHHHHHHHHHCCHHEEH NRHRLIERQGARLLLAGVDDHWDGSPDLELAVGGAPAHDFRILLAHCPDIADEAATAGFH HHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHEEEEHHCCCHHHHHHCCCEE LQLSGHTHGGHVRLPGLGPLCLPRHGWRYDMGHFQVGSMHLFVSRGISGLPLRLGCPPEV EEECCCCCCCEEECCCCCCCCCCCCCCEECCCCEEECCEEEEEECCCCCCCEEECCCCCC NLFQLRRIAAETGDAQSATLRAHGDHGEAARFQRPSAGSPARD CHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure TTTLPSIRKQRDRQPRLRYSPRWIGAGLAGSVLAGVAGFYGGLPITLALAGAGAMSAGY CCCCCHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCE ALTIEPRRIRLTVKDLSFEHLPSGLDGLTIGQLSDLHLGHRYSFTNAHQAIDQLLATQPE EEEECCCEEEEEEECCCHHHCCCCCCCCEECCCCCCCCCCEECCCHHHHHHHHHHHCCCC IIVLTGDLVQTRAAISRLPDVLRRLHAPLGVYAVPGNHDYWEGMPHIATMLREHGIQLLI EEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCHHHHHHHHHCCHHEEH NRHRLIERQGARLLLAGVDDHWDGSPDLELAVGGAPAHDFRILLAHCPDIADEAATAGFH HHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHEEEEHHCCCHHHHHHCCCEE LQLSGHTHGGHVRLPGLGPLCLPRHGWRYDMGHFQVGSMHLFVSRGISGLPLRLGCPPEV EEECCCCCCCEEECCCCCCCCCCCCCCEECCCCEEECCEEEEEECCCCCCCEEECCCCCC NLFQLRRIAAETGDAQSATLRAHGDHGEAARFQRPSAGSPARD CHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]