| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is nuoI2 [H]
Identifier: 222525393
GI number: 222525393
Start: 2716923
End: 2717999
Strand: Reverse
Name: nuoI2 [H]
Synonym: Chy400_2138
Alternate gene names: 222525393
Gene position: 2717999-2716923 (Counterclockwise)
Preceding gene: 222525394
Following gene: 222525392
Centisome position: 51.59
GC content: 61.1
Gene sequence:
>1077_bases ATGACAGCACCACCATTCGAGATAGAGATTCCACGTGGGCGTGTGATTGAGGTGCAGCGCGATGACACCCGTGTCCGACG GGGCAGTGGTTTGCTGCGGGGGATGGCTGTGATCTGGAAGCACTGGAAGGAGTCGTTCCGCCTGAACCGAAGCTATCGGC AGATTCACGGTACCTTTACCATCCAGTATCCCGAAGAGCGACCGCGCATCCCCGAAACCTACCGCAACATGCCCATCCTC CTCTACGACGACGAAACCGGTCACGAACTCTGTACCTCGTGCTTTCAGTGCGAACGCATTTGCCCGCCACAAGTAATTCA TATGACGCAGGCGAAAGACCCGGCTACCGGTAAGCCAGTACCGGCTGTGGCCGAGTTTATCATCGAGTACGATGCCTGCA TGAGCTGTGGTTTCTGCGCCGAAGTCTGTCCGTTCGATGCGATCAAGATGGATCACGAGTTCGAGTTATCGACCGACGAC CACAGCAGTCTGACCGTGCATAAAGCGCAACTGAACCGACCCATCAGTTACTACGAGAAGATCGCTCCCACAATGTGGGC TGAAGTTCGCGAGAGTGCATTGAAGAAGTTGCAGGGCAATATTCGCCGGCGGCCAGACGTGATCGGGATTGCCCCCCATC TGACCGAACGGATTGCTGCCCGGCGAGCGGAACTGGCTGCGCAGGCACCTGCTTCACCACCTGAAGCTGCTACACCGGCA GCTCCCGCCGAGGCTCGCAAACTGTCCCCTGAAGAGAAGGCGGCGAAACTGGCGGCCATCCGGGCGGCAAAGGCTGCCCA GACCGGTGATGGCACGTCCCCTGCTGAAGGTGCATCACCGACAGCGCCTGCTCCCGCCGACGACAAAGCGGCGAAACTGG CGGCCATCCGGGCGGCCAACGCGGCGAAGAAGGCCGCCGAAGGCGCCGCTCCCGCTCCAACCGGCGATGCGCCGGCGGCT CCGACTACCCCTGCCGACGAGAAAGCGGCGCGGTTAGCAGCCATCCGGGCCGCCAACGCAGCGAAGCGAAAACAGGCCGA GGAACAGGCACGTGACGGTTCGGGAGAGGAAGCATAA
Upstream 100 bases:
>100_bases TCAACCTGACGCCCCTGGCCGATATGTGTCGTGGGTACAAGGTGGCCGATATTGTGGTCATTCTCGGCAGCATCGACATC GTGATGGGAGAGGTGGATCG
Downstream 100 bases:
>100_bases CCCGACGGAGAACCTTCATGTACGACATCTTGCAGGGACTCATTAACGGTACCTTTGGCTGGGGATGGCCCGATTGGTTG ATCAACCTGATCGGCTACAT
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I 2; NDH-1 subunit I 2 [H]
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTAPPFEIEIPRGRVIEVQRDDTRVRRGSGLLRGMAVIWKHWKESFRLNRSYRQIHGTFTIQYPEERPRIPETYRNMPIL LYDDETGHELCTSCFQCERICPPQVIHMTQAKDPATGKPVPAVAEFIIEYDACMSCGFCAEVCPFDAIKMDHEFELSTDD HSSLTVHKAQLNRPISYYEKIAPTMWAEVRESALKKLQGNIRRRPDVIGIAPHLTERIAARRAELAAQAPASPPEAATPA APAEARKLSPEEKAAKLAAIRAAKAAQTGDGTSPAEGASPTAPAPADDKAAKLAAIRAANAAKKAAEGAAPAPTGDAPAA PTTPADEKAARLAAIRAANAAKRKQAEEQARDGSGEEA
Sequences:
>Translated_358_residues MTAPPFEIEIPRGRVIEVQRDDTRVRRGSGLLRGMAVIWKHWKESFRLNRSYRQIHGTFTIQYPEERPRIPETYRNMPIL LYDDETGHELCTSCFQCERICPPQVIHMTQAKDPATGKPVPAVAEFIIEYDACMSCGFCAEVCPFDAIKMDHEFELSTDD HSSLTVHKAQLNRPISYYEKIAPTMWAEVRESALKKLQGNIRRRPDVIGIAPHLTERIAARRAELAAQAPASPPEAATPA APAEARKLSPEEKAAKLAAIRAAKAAQTGDGTSPAEGASPTAPAPADDKAAKLAAIRAANAAKKAAEGAAPAPTGDAPAA PTTPADEKAARLAAIRAANAAKRKQAEEQARDGSGEEA >Mature_357_residues TAPPFEIEIPRGRVIEVQRDDTRVRRGSGLLRGMAVIWKHWKESFRLNRSYRQIHGTFTIQYPEERPRIPETYRNMPILL YDDETGHELCTSCFQCERICPPQVIHMTQAKDPATGKPVPAVAEFIIEYDACMSCGFCAEVCPFDAIKMDHEFELSTDDH SSLTVHKAQLNRPISYYEKIAPTMWAEVRESALKKLQGNIRRRPDVIGIAPHLTERIAARRAELAAQAPASPPEAATPAA PAEARKLSPEEKAAKLAAIRAAKAAQTGDGTSPAEGASPTAPAPADDKAAKLAAIRAANAAKKAAEGAAPAPTGDAPAAP TTPADEKAARLAAIRAANAAKRKQAEEQARDGSGEEA
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Drosophila melanogaster, GI17864306, Length=182, Percent_Identity=32.4175824175824, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR010226 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 38754; Mature: 38623
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPPFEIEIPRGRVIEVQRDDTRVRRGSGLLRGMAVIWKHWKESFRLNRSYRQIHGTFT CCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEECEEE IQYPEERPRIPETYRNMPILLYDDETGHELCTSCFQCERICPPQVIHMTQAKDPATGKPV EECCCCCCCCCHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHEEHHCCCCCCCCCCH PAVAEFIIEYDACMSCGFCAEVCPFDAIKMDHEFELSTDDHSSLTVHKAQLNRPISYYEK HHHHHHHHHHHHHHCCCCHHHHCCCHHEECCCCEECCCCCCCCEEEEHHHHCCCHHHHHH IAPTMWAEVRESALKKLQGNIRRRPDVIGIAPHLTERIAARRAELAAQAPASPPEAATPA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCC APAEARKLSPEEKAAKLAAIRAAKAAQTGDGTSPAEGASPTAPAPADDKAAKLAAIRAAN CCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AAKKAAEGAAPAPTGDAPAAPTTPADEKAARLAAIRAANAAKRKQAEEQARDGSGEEA HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TAPPFEIEIPRGRVIEVQRDDTRVRRGSGLLRGMAVIWKHWKESFRLNRSYRQIHGTFT CCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEECEEE IQYPEERPRIPETYRNMPILLYDDETGHELCTSCFQCERICPPQVIHMTQAKDPATGKPV EECCCCCCCCCHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHEEHHCCCCCCCCCCH PAVAEFIIEYDACMSCGFCAEVCPFDAIKMDHEFELSTDDHSSLTVHKAQLNRPISYYEK HHHHHHHHHHHHHHCCCCHHHHCCCHHEECCCCEECCCCCCCCEEEEHHHHCCCHHHHHH IAPTMWAEVRESALKKLQGNIRRRPDVIGIAPHLTERIAARRAELAAQAPASPPEAATPA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCC APAEARKLSPEEKAAKLAAIRAAKAAQTGDGTSPAEGASPTAPAPADDKAAKLAAIRAAN CCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AAKKAAEGAAPAPTGDAPAAPTTPADEKAARLAAIRAANAAKRKQAEEQARDGSGEEA HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA