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The map label for this gene is rfaQ [H]

Identifier: 222525369

GI number: 222525369

Start: 2686803

End: 2687927

Strand: Reverse

Name: rfaQ [H]

Synonym: Chy400_2114

Alternate gene names: 222525369

Gene position: 2687927-2686803 (Counterclockwise)

Preceding gene: 222525370

Following gene: 222525368

Centisome position: 51.01

GC content: 58.22

Gene sequence:

>1125_bases
ATGCGCGCAACACTGCTACATCTGCTGGCAATCACTGCCCGGCCATTGGTTCGGCGTTCACCGGTGCACCCACCCCAACG
GGTTCTTGTTATCAAACCCGATCATCTCGGTGATCTGCTGCTGGCAACACCGGCACTCACCGCGCTGCGAGCTGCATTAC
CGACTGCACACATAACGGCGTTGGTCGGGCCATGGGCAGCTTCGATGTGGGCACAGATGCGTGAGATCGATACCCTGGAG
ACACTTCCTTTTCCGGGCTTTAATCGTGACGCACCAAAACCACTACCGTGGGAGCCGTATATCCTGCTCTGTCAGACGGC
ACGTCGGCTACGTCAACAGGCTTATGACGCTGCACTCATCTTGCGCGATGATCACTGGTGGGGCGCAGCACTGGCCCTGC
TAGCTGGGATTCCACAGCGTATCGGCTTTGCTCATCCGTTGTGCACATCACTGCTGAGTGTCGCATTACCATACCAGCCT
CGCCAACACGTCACCCAACAGGCACTTGATATAGTCGCAGCGCTTACCAACACTCTGCCCACTGCCACAGCGTTGCGCTA
TACCCCAACCGACGCTGCCCGAACGTGGGCTATCGCCTGGACACAACAGCATCTCAAACCAGATGAACACCTGATCATTA
TTCACCCCGGTACGGGTGGGCCGACTAAACACTGGCTACGCGAGCACTGGAGCAGATTGATACAAGAATTATGTCAACCA
GGACGACGCATTCTCCTGACAGGCAGCCCGGCGGAAACCGCAGAACTGACCGCGATTGCGGCTAGCAGTCCTGCTGAACT
ACTTATGTCAAGCAACGATCTGACGATTGACCGGCTGGCGGCGCTGTTTGCTCACGCCAGGCTGGTAATTGGGGTTGACA
GTGGACCACTGCATATCGCCGTCAGTCAGGGGGTGCCAACCATCCACCTCTTCGGCCCCAGCGATCCGTTGCGCTTTGGG
CCGTGGGGCGATCCTGCCCGCCATCGTGTGCTGAGTGCCGGTCTGCCGTGTAGTCCGTGTGGGGTGTTTGCCACCTGCCC
ACGTGCCACCAACCCGCCAGAATGTATGGCTGCAATCACGCCGGAACAGGTGTTGGCAGGTGTTGAAGCGTTGTTGGGAA
AGTGA

Upstream 100 bases:

>100_bases
CGAACGCCTACGGCAACTCGCCCGTGAGGTCAACGCACTCTTGTTCTAAACCTGGCCAGAGGGGGTGTTGTCTCACTCCC
CTCTGGTCATCCATCCCACC

Downstream 100 bases:

>100_bases
TTGACACCGATTCTGGCGGCTGCTACAATAACTCGTTGTAATCAAAGGTACTCTCTCAAACGTTATGAGAGATATATGCC
GGTTTTAACACGTAGCTTTG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MRATLLHLLAITARPLVRRSPVHPPQRVLVIKPDHLGDLLLATPALTALRAALPTAHITALVGPWAASMWAQMREIDTLE
TLPFPGFNRDAPKPLPWEPYILLCQTARRLRQQAYDAALILRDDHWWGAALALLAGIPQRIGFAHPLCTSLLSVALPYQP
RQHVTQQALDIVAALTNTLPTATALRYTPTDAARTWAIAWTQQHLKPDEHLIIIHPGTGGPTKHWLREHWSRLIQELCQP
GRRILLTGSPAETAELTAIAASSPAELLMSSNDLTIDRLAALFAHARLVIGVDSGPLHIAVSQGVPTIHLFGPSDPLRFG
PWGDPARHRVLSAGLPCSPCGVFATCPRATNPPECMAAITPEQVLAGVEALLGK

Sequences:

>Translated_374_residues
MRATLLHLLAITARPLVRRSPVHPPQRVLVIKPDHLGDLLLATPALTALRAALPTAHITALVGPWAASMWAQMREIDTLE
TLPFPGFNRDAPKPLPWEPYILLCQTARRLRQQAYDAALILRDDHWWGAALALLAGIPQRIGFAHPLCTSLLSVALPYQP
RQHVTQQALDIVAALTNTLPTATALRYTPTDAARTWAIAWTQQHLKPDEHLIIIHPGTGGPTKHWLREHWSRLIQELCQP
GRRILLTGSPAETAELTAIAASSPAELLMSSNDLTIDRLAALFAHARLVIGVDSGPLHIAVSQGVPTIHLFGPSDPLRFG
PWGDPARHRVLSAGLPCSPCGVFATCPRATNPPECMAAITPEQVLAGVEALLGK
>Mature_374_residues
MRATLLHLLAITARPLVRRSPVHPPQRVLVIKPDHLGDLLLATPALTALRAALPTAHITALVGPWAASMWAQMREIDTLE
TLPFPGFNRDAPKPLPWEPYILLCQTARRLRQQAYDAALILRDDHWWGAALALLAGIPQRIGFAHPLCTSLLSVALPYQP
RQHVTQQALDIVAALTNTLPTATALRYTPTDAARTWAIAWTQQHLKPDEHLIIIHPGTGGPTKHWLREHWSRLIQELCQP
GRRILLTGSPAETAELTAIAASSPAELLMSSNDLTIDRLAALFAHARLVIGVDSGPLHIAVSQGVPTIHLFGPSDPLRFG
PWGDPARHRVLSAGLPCSPCGVFATCPRATNPPECMAAITPEQVLAGVEALLGK

Specific function: Catalyzes heptose transfer to the lipopolysaccharide core. It transfers a heptose, called heptose(III), to the heptose(II) of the inner core [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=298, Percent_Identity=27.1812080536913, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011916 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 40629; Mature: 40629

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRATLLHLLAITARPLVRRSPVHPPQRVLVIKPDHLGDLLLATPALTALRAALPTAHITA
CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHH
LVGPWAASMWAQMREIDTLETLPFPGFNRDAPKPLPWEPYILLCQTARRLRQQAYDAALI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEE
LRDDHWWGAALALLAGIPQRIGFAHPLCTSLLSVALPYQPRQHVTQQALDIVAALTNTLP
EECCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
TATALRYTPTDAARTWAIAWTQQHLKPDEHLIIIHPGTGGPTKHWLREHWSRLIQELCQP
CHHEEEECCCCHHHEEEEEEEHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
GRRILLTGSPAETAELTAIAASSPAELLMSSNDLTIDRLAALFAHARLVIGVDSGPLHIA
CCEEEEECCCCCCHHEEEEECCCCHHHHCCCCCCCHHHHHHHHHCCEEEEEECCCCEEEE
VSQGVPTIHLFGPSDPLRFGPWGDPARHRVLSAGLPCSPCGVFATCPRATNPPECMAAIT
EECCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHEECC
PEQVLAGVEALLGK
HHHHHHHHHHHHCC
>Mature Secondary Structure
MRATLLHLLAITARPLVRRSPVHPPQRVLVIKPDHLGDLLLATPALTALRAALPTAHITA
CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHH
LVGPWAASMWAQMREIDTLETLPFPGFNRDAPKPLPWEPYILLCQTARRLRQQAYDAALI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEE
LRDDHWWGAALALLAGIPQRIGFAHPLCTSLLSVALPYQPRQHVTQQALDIVAALTNTLP
EECCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
TATALRYTPTDAARTWAIAWTQQHLKPDEHLIIIHPGTGGPTKHWLREHWSRLIQELCQP
CHHEEEECCCCHHHEEEEEEEHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
GRRILLTGSPAETAELTAIAASSPAELLMSSNDLTIDRLAALFAHARLVIGVDSGPLHIA
CCEEEEECCCCCCHHEEEEECCCCHHHHCCCCCCCHHHHHHHHHCCEEEEEECCCCEEEE
VSQGVPTIHLFGPSDPLRFGPWGDPARHRVLSAGLPCSPCGVFATCPRATNPPECMAAIT
EECCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHEECC
PEQVLAGVEALLGK
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1732225; 1447141; 8041620; 9278503 [H]