| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525370
Identifier: 222525370
GI number: 222525370
Start: 2687979
End: 2689286
Strand: Reverse
Name: 222525370
Synonym: Chy400_2115
Alternate gene names: NA
Gene position: 2689286-2687979 (Counterclockwise)
Preceding gene: 222525371
Following gene: 222525369
Centisome position: 51.04
GC content: 56.27
Gene sequence:
>1308_bases ATGCCTTCGGCACCTCCGCAACCGGTTCAACTTGCCTGTCCTGCCTGCGGGACACGTTTTCGTTCGTTTATTTTCACATT AGTTGATGGTGGTGATCAACCAGAGCTTAAGGGAGCGCTGCTGACCGGCCAACTCAACGTCGCGGCCTGTCCCCGCTGTG GTGTGGCGAGCGTCCTCAGCGCACCACTCGTGTATCACGACGCCGGCAAACAGCTTTTTCTGGTGTACGTTCCGCAAGAA CTCAACAGCCAGCCGCAAGAGATTGATCGCTTTATCGGTGATGCATCCGCATTTTTCCTCCGCTCGTTGCCGCCCGACAC GCCACGTGCGTATCTGCTGGCACCACGTCGTTTTCTCAGCCTGCAATCGCTCATCGAGGCTATCTACGAAGCGGATGGTG TTTCAGCGGAAGATCTACGCCGACAGAACCGCTACGTCGAAATCCTTACCGAGCTTGTCAATCTGGTTGAGGATGATGAG CAATTCGCGGCTGCGGTACAGCGGTATCACGAAGAATTGACCCCGGAATTCCTTACGACCCTTGAAGCATTCATCGGCGC TACCAACGAGACTCAGGCGCAAATGCGGGCTATGCTCGTAAAAGTCCGGGAAAAGCTCCTTGTTCAACTCGAACGCCTCA CCGAGCAGGCAGCGATTGCCGAGCTGAAAGAGGCTATCGAGCGGTTGCGTGCCGCCAGCGATGAGGAATTACCTGATCTG GTCAGCGAACTGCGGTTGCTCATCGATTACAGCTTTTTCCAGATGTGGACCGAGCAGATCGAGGCCGCTACTGCCGCCGG TGATACTGAGACGGCACAGCGTCTGACCGAACGCCGGGCGCGCATCCTGGAGTTGATCGAGGAGATTGATCGGGCATCGC AAGAGCTGTTTGAACGCGGAACAGCCCTGATTAATGCTGTGCTGGCAGCCCCCGATCCGGTTGCCGCATTGAAAGCGCGG GCTGATGAAGTGACTGATGATTTGCTGGTCGTCTTGTCGGCAAACATTGCGGCGGCACGGTACGCCGGTGATCAAGCGTT GCTCGAACAGCTTGAACGATTGACAACCACGATCAAAGAAATTATCAACTCACGGCTGACCCCGGAAGATCGCTTTATTA ACGAACTCCTGATGCAAGAGACGACGGCAGAAGCGACGCGCTTGCTGCGCAAGAACATGACGAAGATCACTCCCGAACTG GCACGCCGGCTCAATGAGCGGGCCGAGGTGGAAGAAAAACGCGCTCAGCAGGCCAATGCCGAACGCCTACGGCAACTCGC CCGTGAGGTCAACGCACTCTTGTTCTAA
Upstream 100 bases:
>100_bases ATCCCCTCATCACTGGCTCAGTGATCCACTCTACGCTGTTGTCGGGCGACGAGTGGTATAATCAGCGATCAGTGAAGTGA TTAGACACTGGAGAAAATCG
Downstream 100 bases:
>100_bases ACCTGGCCAGAGGGGGTGTTGTCTCACTCCCCTCTGGTCATCCATCCCACCATGCGCGCAACACTGCTACATCTGCTGGC AATCACTGCCCGGCCATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MPSAPPQPVQLACPACGTRFRSFIFTLVDGGDQPELKGALLTGQLNVAACPRCGVASVLSAPLVYHDAGKQLFLVYVPQE LNSQPQEIDRFIGDASAFFLRSLPPDTPRAYLLAPRRFLSLQSLIEAIYEADGVSAEDLRRQNRYVEILTELVNLVEDDE QFAAAVQRYHEELTPEFLTTLEAFIGATNETQAQMRAMLVKVREKLLVQLERLTEQAAIAELKEAIERLRAASDEELPDL VSELRLLIDYSFFQMWTEQIEAATAAGDTETAQRLTERRARILELIEEIDRASQELFERGTALINAVLAAPDPVAALKAR ADEVTDDLLVVLSANIAAARYAGDQALLEQLERLTTTIKEIINSRLTPEDRFINELLMQETTAEATRLLRKNMTKITPEL ARRLNERAEVEEKRAQQANAERLRQLAREVNALLF
Sequences:
>Translated_435_residues MPSAPPQPVQLACPACGTRFRSFIFTLVDGGDQPELKGALLTGQLNVAACPRCGVASVLSAPLVYHDAGKQLFLVYVPQE LNSQPQEIDRFIGDASAFFLRSLPPDTPRAYLLAPRRFLSLQSLIEAIYEADGVSAEDLRRQNRYVEILTELVNLVEDDE QFAAAVQRYHEELTPEFLTTLEAFIGATNETQAQMRAMLVKVREKLLVQLERLTEQAAIAELKEAIERLRAASDEELPDL VSELRLLIDYSFFQMWTEQIEAATAAGDTETAQRLTERRARILELIEEIDRASQELFERGTALINAVLAAPDPVAALKAR ADEVTDDLLVVLSANIAAARYAGDQALLEQLERLTTTIKEIINSRLTPEDRFINELLMQETTAEATRLLRKNMTKITPEL ARRLNERAEVEEKRAQQANAERLRQLAREVNALLF >Mature_434_residues PSAPPQPVQLACPACGTRFRSFIFTLVDGGDQPELKGALLTGQLNVAACPRCGVASVLSAPLVYHDAGKQLFLVYVPQEL NSQPQEIDRFIGDASAFFLRSLPPDTPRAYLLAPRRFLSLQSLIEAIYEADGVSAEDLRRQNRYVEILTELVNLVEDDEQ FAAAVQRYHEELTPEFLTTLEAFIGATNETQAQMRAMLVKVREKLLVQLERLTEQAAIAELKEAIERLRAASDEELPDLV SELRLLIDYSFFQMWTEQIEAATAAGDTETAQRLTERRARILELIEEIDRASQELFERGTALINAVLAAPDPVAALKARA DEVTDDLLVVLSANIAAARYAGDQALLEQLERLTTTIKEIINSRLTPEDRFINELLMQETTAEATRLLRKNMTKITPELA RRLNERAEVEEKRAQQANAERLRQLAREVNALLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48757; Mature: 48626
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSAPPQPVQLACPACGTRFRSFIFTLVDGGDQPELKGALLTGQLNVAACPRCGVASVLS CCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHH APLVYHDAGKQLFLVYVPQELNSQPQEIDRFIGDASAFFLRSLPPDTPRAYLLAPRRFLS CCHHEECCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LQSLIEAIYEADGVSAEDLRRQNRYVEILTELVNLVEDDEQFAAAVQRYHEELTPEFLTT HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHH LEAFIGATNETQAQMRAMLVKVREKLLVQLERLTEQAAIAELKEAIERLRAASDEELPDL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH VSELRLLIDYSFFQMWTEQIEAATAAGDTETAQRLTERRARILELIEEIDRASQELFERG HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TALINAVLAAPDPVAALKARADEVTDDLLVVLSANIAAARYAGDQALLEQLERLTTTIKE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHH IINSRLTPEDRFINELLMQETTAEATRLLRKNMTKITPELARRLNERAEVEEKRAQQANA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ERLRQLAREVNALLF HHHHHHHHHHHHHCC >Mature Secondary Structure PSAPPQPVQLACPACGTRFRSFIFTLVDGGDQPELKGALLTGQLNVAACPRCGVASVLS CCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHH APLVYHDAGKQLFLVYVPQELNSQPQEIDRFIGDASAFFLRSLPPDTPRAYLLAPRRFLS CCHHEECCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LQSLIEAIYEADGVSAEDLRRQNRYVEILTELVNLVEDDEQFAAAVQRYHEELTPEFLTT HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHH LEAFIGATNETQAQMRAMLVKVREKLLVQLERLTEQAAIAELKEAIERLRAASDEELPDL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH VSELRLLIDYSFFQMWTEQIEAATAAGDTETAQRLTERRARILELIEEIDRASQELFERG HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TALINAVLAAPDPVAALKARADEVTDDLLVVLSANIAAARYAGDQALLEQLERLTTTIKE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHH IINSRLTPEDRFINELLMQETTAEATRLLRKNMTKITPELARRLNERAEVEEKRAQQANA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ERLRQLAREVNALLF HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA