Click here to switch to the map view.

The map label for this gene is 222525310

Identifier: 222525310

GI number: 222525310

Start: 2601884

End: 2602228

Strand: Direct

Name: 222525310

Synonym: Chy400_2052

Alternate gene names: NA

Gene position: 2601884-2602228 (Clockwise)

Preceding gene: 222525309

Following gene: 222525312

Centisome position: 49.38

GC content: 55.94

Gene sequence:

>345_bases
ATGACCAAGCCATACCTTGATCTACCCGCCCAATATCTCGCCCAGGTACGCACGATTTTGCAAACATACGTCCCCGAATA
CGAGGTTTGGGCCTACGGCAGCCGGGTGCGGGGCGAGGCATTTGCCGCCAGTGATCTCGATCTGGTGGTGCGGAACCCTC
GTCATTTGTCACAGCCGTGTGACCATATCGTTGCACTACGGGAAGCGTTTGTCGCCAGTAATCTCCCGATTCGGGTTGAT
GTGGTGGATTGGGCACGGATTCCGCCTTCATTCCATCACGAGATTGAACGCGGGTATGTGGTGGTGCAACCGGCAATGAG
TACCGACAACGTCCGGGAAGATTGA

Upstream 100 bases:

>100_bases
TTGTTCAGCAAACGTTGACACTGTTGCCTGATTTCATCCGCGATGCGTATGCACTGGCAGAACGTCTCCGTACCGGCAAA
ACCATTGTCGAAGATGACCT

Downstream 100 bases:

>100_bases
GATGCGGAACGTGGTGAAGCTGATGGCTACTCGACTGGCCGGGCGCGTTGGGCAACCTCCAGAATGGCGTCAAGAACCTG
CACAATTTCGGCATCGATTG

Product: DNA polymerase beta domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MTKPYLDLPAQYLAQVRTILQTYVPEYEVWAYGSRVRGEAFAASDLDLVVRNPRHLSQPCDHIVALREAFVASNLPIRVD
VVDWARIPPSFHHEIERGYVVVQPAMSTDNVRED

Sequences:

>Translated_114_residues
MTKPYLDLPAQYLAQVRTILQTYVPEYEVWAYGSRVRGEAFAASDLDLVVRNPRHLSQPCDHIVALREAFVASNLPIRVD
VVDWARIPPSFHHEIERGYVVVQPAMSTDNVRED
>Mature_113_residues
TKPYLDLPAQYLAQVRTILQTYVPEYEVWAYGSRVRGEAFAASDLDLVVRNPRHLSQPCDHIVALREAFVASNLPIRVDV
VDWARIPPSFHHEIERGYVVVQPAMSTDNVRED

Specific function: Unknown

COG id: COG1708

COG function: function code R; Predicted nucleotidyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002934 [H]

Pfam domain/function: PF01909 NTP_transf_2 [H]

EC number: NA

Molecular weight: Translated: 13048; Mature: 12917

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPYLDLPAQYLAQVRTILQTYVPEYEVWAYGSRVRGEAFAASDLDLVVRNPRHLSQPC
CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEECCCCCEEEECCCHHCCHHH
DHIVALREAFVASNLPIRVDVVDWARIPPSFHHEIERGYVVVQPAMSTDNVRED
HHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TKPYLDLPAQYLAQVRTILQTYVPEYEVWAYGSRVRGEAFAASDLDLVVRNPRHLSQPC
CCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEECCCCCEEEECCCHHCCHHH
DHIVALREAFVASNLPIRVDVVDWARIPPSFHHEIERGYVVVQPAMSTDNVRED
HHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]