Click here to switch to the map view.

The map label for this gene is yhfA [H]

Identifier: 222525228

GI number: 222525228

Start: 2499884

End: 2500315

Strand: Direct

Name: yhfA [H]

Synonym: Chy400_1968

Alternate gene names: 222525228

Gene position: 2499884-2500315 (Clockwise)

Preceding gene: 222525226

Following gene: 222525229

Centisome position: 47.45

GC content: 58.1

Gene sequence:

>432_bases
ATGGGTACAGTAATTCATGCCAGTGTTCGCCTGCGTGAAGGTCTCCACTTTACCGCTGTAGCTGATTCAGGGCGGGCCAT
CGAACTCGACAGTCCCCACGAAGGTAATACCGATCTGGCGGGGCCTTCACCGATGGAGACGGTGTTGATGGCGCTGGCTG
GCTGTTCGGCAATGGATGTGATTAGCATTCTGCGCAAGAAGCGGCAGCCGGTTACCGGTCTTGAGGTCAAAGCGCAGGGT
GTGCGGGGTGATGAGTACCCCAAACCGTACACGAACATTGAACTGGTGTATCGCTGTTCCGGCGAGGTTGATCCGGCTGC
CCTCGAACGGGCGATTGAGCTGTCCCGCGAGCGTTACTGCCCGGTCTGGCGGATGCTAGGCGCAACCGTTGACATTCAGT
ACCGGTACGAGATTGTGCCGGCACTCGATTAG

Upstream 100 bases:

>100_bases
TCTTTTTGCATTATAACCCGGAGTGCTATACTAAACATGGTAAAGTCAATAGTCTTATTGACTGACCATCCATGCCGTTG
TTGATAGCGAGAGGATGTGT

Downstream 100 bases:

>100_bases
ACCATCGTCGTTTTGGGGCATACACCGGGGAAGCGCGATGAACCGATGAGTAGATCAACGTTCACGCTCCTGTTCACGCT
GTTGTCTACGCCGGCAGGTT

Product: OsmC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MGTVIHASVRLREGLHFTAVADSGRAIELDSPHEGNTDLAGPSPMETVLMALAGCSAMDVISILRKKRQPVTGLEVKAQG
VRGDEYPKPYTNIELVYRCSGEVDPAALERAIELSRERYCPVWRMLGATVDIQYRYEIVPALD

Sequences:

>Translated_143_residues
MGTVIHASVRLREGLHFTAVADSGRAIELDSPHEGNTDLAGPSPMETVLMALAGCSAMDVISILRKKRQPVTGLEVKAQG
VRGDEYPKPYTNIELVYRCSGEVDPAALERAIELSRERYCPVWRMLGATVDIQYRYEIVPALD
>Mature_142_residues
GTVIHASVRLREGLHFTAVADSGRAIELDSPHEGNTDLAGPSPMETVLMALAGCSAMDVISILRKKRQPVTGLEVKAQGV
RGDEYPKPYTNIELVYRCSGEVDPAALERAIELSRERYCPVWRMLGATVDIQYRYEIVPALD

Specific function: Unknown

COG id: COG1765

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789755, Length=138, Percent_Identity=44.9275362318841, Blast_Score=109, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR003718 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: NA

Molecular weight: Translated: 15743; Mature: 15612

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTVIHASVRLREGLHFTAVADSGRAIELDSPHEGNTDLAGPSPMETVLMALAGCSAMDV
CCCEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHH
ISILRKKRQPVTGLEVKAQGVRGDEYPKPYTNIELVYRCSGEVDPAALERAIELSRERYC
HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCC
PVWRMLGATVDIQYRYEIVPALD
HHHHHHCCEEEEEEEEEEEECCC
>Mature Secondary Structure 
GTVIHASVRLREGLHFTAVADSGRAIELDSPHEGNTDLAGPSPMETVLMALAGCSAMDV
CCEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHH
ISILRKKRQPVTGLEVKAQGVRGDEYPKPYTNIELVYRCSGEVDPAALERAIELSRERYC
HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCC
PVWRMLGATVDIQYRYEIVPALD
HHHHHHCCEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]