| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yceI [C]
Identifier: 222525229
GI number: 222525229
Start: 2500462
End: 2501010
Strand: Direct
Name: yceI [C]
Synonym: Chy400_1969
Alternate gene names: 222525229
Gene position: 2500462-2501010 (Clockwise)
Preceding gene: 222525228
Following gene: 222525230
Centisome position: 47.46
GC content: 53.55
Gene sequence:
>549_bases ATGACCTGGGTAATCGACGCTTCCCATTCAACAATTACGTTTTCCGTTCGCCATATGATGATCTCCAAAGTCCGTGGCCG TTTTACCCGTTTCGACGGCACGGTTGATTTCGATGAGCAGAACCCGACTAACTCGAAGGTGCAGGTCACGATTGATGCCA GCAGCATCGATACTCGTGACGAACGGCGTGACGGGCATTTGATGTCGCCTGATTTTCTCGATGTCGCCAACTACCCAACG CTGACCTTTGTCAGCAAGCGAGTTGAGGTGATTGACGAGAGTCACGGTCGCATTATCGGTGATCTGACCATTCGTGGCGT TTCCCGCGAGGTCACCCTCGATGTCGAATACAATGGTCAGTCCAAGTCGCCCTGGGGGACGATCAGCGCCGGTTTCAGCG CTACCACGAAGATCAATCGCAAAGACTGGGGCTTGACCTGGAATGTGGCGCTGGAGACCGGTGGGGTGCTGGTCGGTGAG GAAGTGACAATTGAGATTGAGATCGAGATTGTCAAGCAGGTACCACAAGAGGAATCGGTTGCAGCGTAA
Upstream 100 bases:
>100_bases TGAGTAGATCAACGTTCACGCTCCTGTTCACGCTGTTGTCTACGCCGGCAGGTTATGCTGCATGGCGTAAAGCATTGTAG TTTGACAGGAGTATGTCTCT
Downstream 100 bases:
>100_bases TATGACGTTGCCAGAGGCTGCCTGACGGTTACACATGTTGTCATCGAGCAGGCATCCTCTAAGGTTAGAAAAACTGGTAT ACTCAAAGATGAAGCCGCAT
Product: YceI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTWVIDASHSTITFSVRHMMISKVRGRFTRFDGTVDFDEQNPTNSKVQVTIDASSIDTRDERRDGHLMSPDFLDVANYPT LTFVSKRVEVIDESHGRIIGDLTIRGVSREVTLDVEYNGQSKSPWGTISAGFSATTKINRKDWGLTWNVALETGGVLVGE EVTIEIEIEIVKQVPQEESVAA
Sequences:
>Translated_182_residues MTWVIDASHSTITFSVRHMMISKVRGRFTRFDGTVDFDEQNPTNSKVQVTIDASSIDTRDERRDGHLMSPDFLDVANYPT LTFVSKRVEVIDESHGRIIGDLTIRGVSREVTLDVEYNGQSKSPWGTISAGFSATTKINRKDWGLTWNVALETGGVLVGE EVTIEIEIEIVKQVPQEESVAA >Mature_181_residues TWVIDASHSTITFSVRHMMISKVRGRFTRFDGTVDFDEQNPTNSKVQVTIDASSIDTRDERRDGHLMSPDFLDVANYPTL TFVSKRVEVIDESHGRIIGDLTIRGVSREVTLDVEYNGQSKSPWGTISAGFSATTKINRKDWGLTWNVALETGGVLVGEE VTIEIEIEIVKQVPQEESVAA
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=168, Percent_Identity=41.6666666666667, Blast_Score=124, Evalue=4e-30,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 20303; Mature: 20172
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWVIDASHSTITFSVRHMMISKVRGRFTRFDGTVDFDEQNPTNSKVQVTIDASSIDTRD CEEEEECCCCEEEEEHHHHHHHHHHCCEEECCCEEEECCCCCCCCEEEEEEECCCCCCCC ERRDGHLMSPDFLDVANYPTLTFVSKRVEVIDESHGRIIGDLTIRGVSREVTLDVEYNGQ CCCCCCCCCCCCCCCCCCCEEEHHHHHHHEEECCCCEEEEEEEEEECCEEEEEEEEECCC SKSPWGTISAGFSATTKINRKDWGLTWNVALETGGVLVGEEVTIEIEIEIVKQVPQEESV CCCCCEEEECCCEEEEEECCCCCCEEEEEEEECCCEEECCEEEEEEEEEEHHCCCCCCCC AA CC >Mature Secondary Structure TWVIDASHSTITFSVRHMMISKVRGRFTRFDGTVDFDEQNPTNSKVQVTIDASSIDTRD EEEEECCCCEEEEEHHHHHHHHHHCCEEECCCEEEECCCCCCCCEEEEEEECCCCCCCC ERRDGHLMSPDFLDVANYPTLTFVSKRVEVIDESHGRIIGDLTIRGVSREVTLDVEYNGQ CCCCCCCCCCCCCCCCCCCEEEHHHHHHHEEECCCCEEEEEEEEEECCEEEEEEEEECCC SKSPWGTISAGFSATTKINRKDWGLTWNVALETGGVLVGEEVTIEIEIEIVKQVPQEESV CCCCCEEEECCCEEEEEECCCCCCEEEEEEEECCCEEECCEEEEEEEEEEHHCCCCCCCC AA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11418146 [H]