Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222525219

Identifier: 222525219

GI number: 222525219

Start: 2487655

End: 2488797

Strand: Direct

Name: 222525219

Synonym: Chy400_1959

Alternate gene names: NA

Gene position: 2487655-2488797 (Clockwise)

Preceding gene: 222525218

Following gene: 222525220

Centisome position: 47.21

GC content: 54.86

Gene sequence:

>1143_bases
ATGAAGATACAGGTTGCTCCTGCGTTATTACGTTGGGCCTGTGAGCGAGCAGGTTTTCGTGAGGAAGATCTGAAAGGAAA
ATTTCCCAGGCTCGACCGCTGGCTCAACGAAGAAGATCAGCCGACACTCAAGCAGTTGGAGCGTTTCGCTCAGGCCACGC
ATACGCCCATTGGGTTTTTCTTCCTATCGGAACCTCCAACAGAGGCGATCCCGATCCCGGATCTTCGAACTGTTGGAAAC
ATCCGTGTCAGCCGCCCAACGCCTGATCTTCTGGACACCATCTACCTCTGTCAGCAACGGCAGGAGTGGTACCGCGAATT
TGCCCTGATCGCAGGCGAACCTCCGCTGTCGTTCGTTGGTTCAGTCCGAGTTACCGACGATGTTGTCGCCACAGCAGAAC
GTGTTCGGCAAGCCCTGGGCTTCGATCTTGAAGAGCGTAGACAGCTCTCCTCCTGGACAGATGCCCTGCGGCGATTCATC
GAGCAGGCAGACGCTCTCGGCGTACTCGTTATGGTGAATGGCGTCGTTGGCAGCAATAATCGCCGCAAGCTAAACCCTGC
GGAGTTTCGCGGCTTCGCACTCTCAGATCCTCTTGCCCCTTTGATTTTCATCAACGGCGCCGATAGCAAAGCCGCTCAGA
TGTTTACGCTGGCCCACGAACTCGCCCACCTGTGGCTCGGCCAATCCGCTTTGTCCGATGTAGGACCGACAACTACACCA
GAAAACGACGTAGAATGGTGGTGCAATGCGGTTGCCGCTGAGTTGCTCGTGCCGCTTGCCGCACTCCGGTCGGAACTGTA
TTCACGGGAAGAACTGCGTCACACACTTGATCGCCTTTCCCGGCAATTCAAAGTGAGCACCCTGGTGATCTTGCGGCGGC
TGTATGACGTGGAATATCTCACGAGAGAGCAGCTTTGGGCGGAGTACGAAGTAGAGGTGGATCGTCTCAGCCGGATTTCC
GCTGCGAGCGGCGGCAATTTTTATTCGACAACTGCTGCACGGGTCAGCAAGCGCTTTGCTCGCGCGGTAGCGATTTCTGT
CTGGGAGGGACGTACCTCTTTTAGCGAAGCTAGCCGATTGCTTGGTTTCAAAAATATGTCTACCTTTCGTGAATTTAGCA
TACAACTGGGAATAGTTGCGTAA

Upstream 100 bases:

>100_bases
GGCTTGTTGCCCAGCTCCGTGAGCAACAGGCTGAGGCGGCGAAACTCGATGAGGCGATTGTTGCCAATCTGCAAGAACTG
GGCTTTTGGGAGCAGAAGAG

Downstream 100 bases:

>100_bases
TGGCCTACCTGCTCGATGCCAATGTCTTCATCTCAGCAAAGAACCTGCACTACGGACTGGATTTTTGTCCAGCATTCTGG
GATTGGCTTGTTCGTGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MKIQVAPALLRWACERAGFREEDLKGKFPRLDRWLNEEDQPTLKQLERFAQATHTPIGFFFLSEPPTEAIPIPDLRTVGN
IRVSRPTPDLLDTIYLCQQRQEWYREFALIAGEPPLSFVGSVRVTDDVVATAERVRQALGFDLEERRQLSSWTDALRRFI
EQADALGVLVMVNGVVGSNNRRKLNPAEFRGFALSDPLAPLIFINGADSKAAQMFTLAHELAHLWLGQSALSDVGPTTTP
ENDVEWWCNAVAAELLVPLAALRSELYSREELRHTLDRLSRQFKVSTLVILRRLYDVEYLTREQLWAEYEVEVDRLSRIS
AASGGNFYSTTAARVSKRFARAVAISVWEGRTSFSEASRLLGFKNMSTFREFSIQLGIVA

Sequences:

>Translated_380_residues
MKIQVAPALLRWACERAGFREEDLKGKFPRLDRWLNEEDQPTLKQLERFAQATHTPIGFFFLSEPPTEAIPIPDLRTVGN
IRVSRPTPDLLDTIYLCQQRQEWYREFALIAGEPPLSFVGSVRVTDDVVATAERVRQALGFDLEERRQLSSWTDALRRFI
EQADALGVLVMVNGVVGSNNRRKLNPAEFRGFALSDPLAPLIFINGADSKAAQMFTLAHELAHLWLGQSALSDVGPTTTP
ENDVEWWCNAVAAELLVPLAALRSELYSREELRHTLDRLSRQFKVSTLVILRRLYDVEYLTREQLWAEYEVEVDRLSRIS
AASGGNFYSTTAARVSKRFARAVAISVWEGRTSFSEASRLLGFKNMSTFREFSIQLGIVA
>Mature_380_residues
MKIQVAPALLRWACERAGFREEDLKGKFPRLDRWLNEEDQPTLKQLERFAQATHTPIGFFFLSEPPTEAIPIPDLRTVGN
IRVSRPTPDLLDTIYLCQQRQEWYREFALIAGEPPLSFVGSVRVTDDVVATAERVRQALGFDLEERRQLSSWTDALRRFI
EQADALGVLVMVNGVVGSNNRRKLNPAEFRGFALSDPLAPLIFINGADSKAAQMFTLAHELAHLWLGQSALSDVGPTTTP
ENDVEWWCNAVAAELLVPLAALRSELYSREELRHTLDRLSRQFKVSTLVILRRLYDVEYLTREQLWAEYEVEVDRLSRIS
AASGGNFYSTTAARVSKRFARAVAISVWEGRTSFSEASRLLGFKNMSTFREFSIQLGIVA

Specific function: Unknown

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43065; Mature: 43065

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQVAPALLRWACERAGFREEDLKGKFPRLDRWLNEEDQPTLKQLERFAQATHTPIGFF
CCEEHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEE
FLSEPPTEAIPIPDLRTVGNIRVSRPTPDLLDTIYLCQQRQEWYREFALIAGEPPLSFVG
EECCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC
SVRVTDDVVATAERVRQALGFDLEERRQLSSWTDALRRFIEQADALGVLVMVNGVVGSNN
CCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECEECCCC
RRKLNPAEFRGFALSDPLAPLIFINGADSKAAQMFTLAHELAHLWLGQSALSDVGPTTTP
CCCCCHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC
ENDVEWWCNAVAAELLVPLAALRSELYSREELRHTLDRLSRQFKVSTLVILRRLYDVEYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TREQLWAEYEVEVDRLSRISAASGGNFYSTTAARVSKRFARAVAISVWEGRTSFSEASRL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LGFKNMSTFREFSIQLGIVA
HHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MKIQVAPALLRWACERAGFREEDLKGKFPRLDRWLNEEDQPTLKQLERFAQATHTPIGFF
CCEEHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEE
FLSEPPTEAIPIPDLRTVGNIRVSRPTPDLLDTIYLCQQRQEWYREFALIAGEPPLSFVG
EECCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC
SVRVTDDVVATAERVRQALGFDLEERRQLSSWTDALRRFIEQADALGVLVMVNGVVGSNN
CCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECEECCCC
RRKLNPAEFRGFALSDPLAPLIFINGADSKAAQMFTLAHELAHLWLGQSALSDVGPTTTP
CCCCCHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC
ENDVEWWCNAVAAELLVPLAALRSELYSREELRHTLDRLSRQFKVSTLVILRRLYDVEYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TREQLWAEYEVEVDRLSRISAASGGNFYSTTAARVSKRFARAVAISVWEGRTSFSEASRL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LGFKNMSTFREFSIQLGIVA
HHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA