Click here to switch to the map view.

The map label for this gene is 222525220

Identifier: 222525220

GI number: 222525220

Start: 2488797

End: 2489294

Strand: Direct

Name: 222525220

Synonym: Chy400_1960

Alternate gene names: NA

Gene position: 2488797-2489294 (Clockwise)

Preceding gene: 222525219

Following gene: 222525221

Centisome position: 47.24

GC content: 52.21

Gene sequence:

>498_bases
ATGGCCTACCTGCTCGATGCCAATGTCTTCATCTCAGCAAAGAACCTGCACTACGGACTGGATTTTTGTCCAGCATTCTG
GGATTGGCTTGTTCGTGAACACCAGGCAGGAAACGTTTTCACTATCGAAAAGGTGATCGACGAGATTAAAGCAGGACAGG
ATGAGCTTGCCAGTTGGGTGTTGCAATTGCCCGATTCATTCTCCCTCAAACCGGATGCTTCGACTATACAATCACTTGCA
GTGGTTGCTCGATGGGTTAACGCTCAAGCCAATTACAGCCCGGCGGCCAAAAGCATGTTCTTGCAGATTGCCGACTACTA
CCTGGTAGCGCAGGCACTGGCGGCAGGTCACACCGTCGTCACCCATGAGATTCCGCAGAATTCTGTGCATCGGGTCAAAA
TCCCGAATGTTTGTCTCGGACTGAACATACGATACATGAGCCCCTTTGAAATGCTGCGGCGCGAGCGGGCCAGGTTTGTG
CTGGGAAGCACGCCGTGA

Upstream 100 bases:

>100_bases
GGGAGGGACGTACCTCTTTTAGCGAAGCTAGCCGATTGCTTGGTTTCAAAAATATGTCTACCTTTCGTGAATTTAGCATA
CAACTGGGAATAGTTGCGTA

Downstream 100 bases:

>100_bases
AGACAACGGTATTGAGAACAAAAATATCCAGGAGTGAGAATCTCTGGCAAAAAGGAAATAGCTGGACTGCACACAACCGA
CGCTTATTTAACGATCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: PIN Domain-Containing Protein; PIN Domain Protein

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MAYLLDANVFISAKNLHYGLDFCPAFWDWLVREHQAGNVFTIEKVIDEIKAGQDELASWVLQLPDSFSLKPDASTIQSLA
VVARWVNAQANYSPAAKSMFLQIADYYLVAQALAAGHTVVTHEIPQNSVHRVKIPNVCLGLNIRYMSPFEMLRRERARFV
LGSTP

Sequences:

>Translated_165_residues
MAYLLDANVFISAKNLHYGLDFCPAFWDWLVREHQAGNVFTIEKVIDEIKAGQDELASWVLQLPDSFSLKPDASTIQSLA
VVARWVNAQANYSPAAKSMFLQIADYYLVAQALAAGHTVVTHEIPQNSVHRVKIPNVCLGLNIRYMSPFEMLRRERARFV
LGSTP
>Mature_164_residues
AYLLDANVFISAKNLHYGLDFCPAFWDWLVREHQAGNVFTIEKVIDEIKAGQDELASWVLQLPDSFSLKPDASTIQSLAV
VARWVNAQANYSPAAKSMFLQIADYYLVAQALAAGHTVVTHEIPQNSVHRVKIPNVCLGLNIRYMSPFEMLRRERARFVL
GSTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18551; Mature: 18419

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYLLDANVFISAKNLHYGLDFCPAFWDWLVREHQAGNVFTIEKVIDEIKAGQDELASWV
CEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHHHHHH
LQLPDSFSLKPDASTIQSLAVVARWVNAQANYSPAAKSMFLQIADYYLVAQALAAGHTVV
HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE
THEIPQNSVHRVKIPNVCLGLNIRYMSPFEMLRRERARFVLGSTP
EECCCCCCCEEEECCCEEEECEEEEECHHHHHHHHHHCEEECCCC
>Mature Secondary Structure 
AYLLDANVFISAKNLHYGLDFCPAFWDWLVREHQAGNVFTIEKVIDEIKAGQDELASWV
EEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHHHHHH
LQLPDSFSLKPDASTIQSLAVVARWVNAQANYSPAAKSMFLQIADYYLVAQALAAGHTVV
HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE
THEIPQNSVHRVKIPNVCLGLNIRYMSPFEMLRRERARFVLGSTP
EECCCCCCCEEEECCCEEEECEEEEECHHHHHHHHHHCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA