Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is ycjG [C]

Identifier: 222525204

GI number: 222525204

Start: 2468342

End: 2469430

Strand: Direct

Name: ycjG [C]

Synonym: Chy400_1944

Alternate gene names: 222525204

Gene position: 2468342-2469430 (Clockwise)

Preceding gene: 222525203

Following gene: 222525205

Centisome position: 46.85

GC content: 61.89

Gene sequence:

>1089_bases
ATGAGTACCGTCATTCGCACATTATCCGTTGCTCCGCTCGACATCCCGCTGCGCAGTCCGTTCGGGATTGCCGGCGGTGC
GCAAGAGGTGGCGCGCAACCTGTTGGTCACAGTCGAACTGATGAACGGCGTCCGGGGCTACGGTGAAGCGGCTCCTTTTC
CGGCTTTCAACGGTGAAACGCAGGAAAAGGCACTCCAGGCGATAGAGTCGGTTCGTTCGGCGGTAGAGGGTGGTGATGTG
CGTGAATGGCGGGCCATCGCCGGTCTGCTCCGCGACCGCATTCCCGCCAGTGGGTCAGCCCGGTGTGCGATTGAGACGGC
GATCCTCGATGCCTTGACCCGGCACTATCGACTGCCGATGTACGTCTTCTTCGGCGGGGCCGGTCACACGCTCGAAACCG
ATATGACGATCACGACCGGCACGGTGGAAGAAGCTGCGCTGGCGACGCTAGACATTCTCGAACGCGGCATTCGTCAGATC
AAGGTGAAGATCGGCGGCTATGATGTGCAGCACGACCTGGCCCGCATCACCGCGATCCGGGCGCTCGCCCCTGATGCCCC
GCTGATCCTCGATGGCAACGGTGGCTTCACCGCCGAAACAATGCTCGAACTGCTCGGTGCGCTCAGCCTTCAGCAGATCG
TGCCGGCGTTGGTGGAGCAACCGGTGGCCGCCGACGACTGGCCGGGTTTGCGGCAGTTGGTACAGTGGGGCGGCGCACCA
ATCGCCGCCGACGAGACGGCGAGCAGTTCGCTGAACGTGCTACGGATCGTACAAGAGCGTGCCGCGCATGTCATCAATAT
CAAACTGATGAAGACCGGCATTGTGGAAGCGCTTGAGATTGCGGCTATCGCTCGTGCTGCCGGACTGGGATTGATGATTG
GGGGCATGGTCGAGTCGATCCTGGCCATGACCGTATCGGCTCACTTCGCTGCCGGCTTAGGCGGCTTCCGTTTCGTTGAT
CTGGATACGCCGCTATTTCTGGCCACGAATCCTTTCCAGGGCGGATTTGAGCTGCGGGGCGGCGTGATCGACCTCTGCCA
CATAGCGACAGGCCATGGGGTAGAGCCGGCCACACTGCTGGCGGCATAA

Upstream 100 bases:

>100_bases
GCAGAGCGTCTGGCAGGTGTTGGGGGCTGTGATTGTGCTGGTAACGATTACCGTGTATCTACGCCGGCAGTATCGCGTCT
GAGGTCAGCTTGAGGAACGT

Downstream 100 bases:

>100_bases
CAATCGTCACTCCCATCCATAACGGATTGTACAATTCAACCATAGTCTTCCCGCCGGACATCTTCTATACTGCGTATAGA
CGTTATATTCGCATTGATGC

Product: Mandelate racemase/muconate lactonizing protein

Products: NA

Alternate protein names: AE epimerase; AEE [H]

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MSTVIRTLSVAPLDIPLRSPFGIAGGAQEVARNLLVTVELMNGVRGYGEAAPFPAFNGETQEKALQAIESVRSAVEGGDV
REWRAIAGLLRDRIPASGSARCAIETAILDALTRHYRLPMYVFFGGAGHTLETDMTITTGTVEEAALATLDILERGIRQI
KVKIGGYDVQHDLARITAIRALAPDAPLILDGNGGFTAETMLELLGALSLQQIVPALVEQPVAADDWPGLRQLVQWGGAP
IAADETASSSLNVLRIVQERAAHVINIKLMKTGIVEALEIAAIARAAGLGLMIGGMVESILAMTVSAHFAAGLGGFRFVD
LDTPLFLATNPFQGGFELRGGVIDLCHIATGHGVEPATLLAA

Sequences:

>Translated_362_residues
MSTVIRTLSVAPLDIPLRSPFGIAGGAQEVARNLLVTVELMNGVRGYGEAAPFPAFNGETQEKALQAIESVRSAVEGGDV
REWRAIAGLLRDRIPASGSARCAIETAILDALTRHYRLPMYVFFGGAGHTLETDMTITTGTVEEAALATLDILERGIRQI
KVKIGGYDVQHDLARITAIRALAPDAPLILDGNGGFTAETMLELLGALSLQQIVPALVEQPVAADDWPGLRQLVQWGGAP
IAADETASSSLNVLRIVQERAAHVINIKLMKTGIVEALEIAAIARAAGLGLMIGGMVESILAMTVSAHFAAGLGGFRFVD
LDTPLFLATNPFQGGFELRGGVIDLCHIATGHGVEPATLLAA
>Mature_361_residues
STVIRTLSVAPLDIPLRSPFGIAGGAQEVARNLLVTVELMNGVRGYGEAAPFPAFNGETQEKALQAIESVRSAVEGGDVR
EWRAIAGLLRDRIPASGSARCAIETAILDALTRHYRLPMYVFFGGAGHTLETDMTITTGTVEEAALATLDILERGIRQIK
VKIGGYDVQHDLARITAIRALAPDAPLILDGNGGFTAETMLELLGALSLQQIVPALVEQPVAADDWPGLRQLVQWGGAPI
AADETASSSLNVLRIVQERAAHVINIKLMKTGIVEALEIAAIARAAGLGLMIGGMVESILAMTVSAHFAAGLGGFRFVDL
DTPLFLATNPFQGGFELRGGVIDLCHIATGHGVEPATLLAA

Specific function: Catalyzes the epimerization of L-Ala-D-Glu to L-Ala-L- Glu and has probably a role in the metabolism of the murein peptide, of which L-Ala-D-Glu is a component. Is also able to catalyze the reverse reaction and the epimerization of a broad range of other

COG id: COG4948

COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]

Homologues:

Organism=Escherichia coli, GI87081876, Length=331, Percent_Identity=32.6283987915408, Blast_Score=122, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013342
- InterPro:   IPR013341
- InterPro:   IPR001354 [H]

Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]

EC number: NA

Molecular weight: Translated: 38112; Mature: 37980

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVIRTLSVAPLDIPLRSPFGIAGGAQEVARNLLVTVELMNGVRGYGEAAPFPAFNGET
CCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
QEKALQAIESVRSAVEGGDVREWRAIAGLLRDRIPASGSARCAIETAILDALTRHYRLPM
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCE
YVFFGGAGHTLETDMTITTGTVEEAALATLDILERGIRQIKVKIGGYDVQHDLARITAIR
EEEECCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHH
ALAPDAPLILDGNGGFTAETMLELLGALSLQQIVPALVEQPVAADDWPGLRQLVQWGGAP
HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
IAADETASSSLNVLRIVQERAAHVINIKLMKTGIVEALEIAAIARAAGLGLMIGGMVESI
CCCCCCCCCCHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LAMTVSAHFAAGLGGFRFVDLDTPLFLATNPFQGGFELRGGVIDLCHIATGHGVEPATLL
HHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCEECCCEEEEEEECCCCCCCCHHHH
AA
CC
>Mature Secondary Structure 
STVIRTLSVAPLDIPLRSPFGIAGGAQEVARNLLVTVELMNGVRGYGEAAPFPAFNGET
CCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
QEKALQAIESVRSAVEGGDVREWRAIAGLLRDRIPASGSARCAIETAILDALTRHYRLPM
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCE
YVFFGGAGHTLETDMTITTGTVEEAALATLDILERGIRQIKVKIGGYDVQHDLARITAIR
EEEECCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHH
ALAPDAPLILDGNGGFTAETMLELLGALSLQQIVPALVEQPVAADDWPGLRQLVQWGGAP
HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
IAADETASSSLNVLRIVQERAAHVINIKLMKTGIVEALEIAAIARAAGLGLMIGGMVESI
CCCCCCCCCCHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LAMTVSAHFAAGLGGFRFVDLDTPLFLATNPFQGGFELRGGVIDLCHIATGHGVEPATLL
HHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCEECCCEEEEEEECCCCCCCCHHHH
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]