| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525203
Identifier: 222525203
GI number: 222525203
Start: 2467370
End: 2468323
Strand: Direct
Name: 222525203
Synonym: Chy400_1943
Alternate gene names: NA
Gene position: 2467370-2468323 (Clockwise)
Preceding gene: 222525198
Following gene: 222525204
Centisome position: 46.83
GC content: 58.81
Gene sequence:
>954_bases ATGTCCCCCATGAACAACGCTTCTTCGACCGCAACCACAACAACGCGCACCGGTGTCTCGTGGCTCTGGTTAACGGTTGC CCTCTTCGCCCACACCGGCTGGGGTGCCTACCCGGTGTTAGCCCGTTACCTGCAAACCATCAGCCATCTGCCGAGTATGG CGATCCTGGCGTTGGGGAATGCGCTGGCGCTCGTGGTCTATTTGCCGTTTGCGTATCGCCACATCAACGCCAGCCTTTGG CGGACACCGATTATCTGGCTGTTCGCGCTGGTGGTCAGCATCCGGGCAATGACGAACCTGACCTCGGCTCGCTTTACGCT GGCAATCTACGTGCAACTGATTACCCTGCTCACACCACTCATTGTTGCGCTTCTGAGCAAGCTGCTTTTTCGCGAAAGGC TGCCGCCATTCACCCTGCCTGCCATCGGCTTATCAATCTTCGGCTCCCTCTTGATGATGAGCGGTGATGTCAGCAGCGGC GTTATCTTACGGCTCACCGGGAGCGATCTGATCGGCATCGCGATTGCGTTTGTCTCGGCCTGTGCGTTGGCGCTGTATAT GCTGCTGATCCCACGTGCCACCAGCGCAGGGCATGTCAGCGCAGAGGCGATGTTGTTCGTGCAACTGGTCGCGCTGACGA TCACCTGTGGCGCGATGAGTCTGTTGCTGCGCGAACCCTGGAGCCGATTTGCTGCTATCGGACTGCTGGACTGGATCGTG TTCGCTGCTTTTGTCATCTTTGTCTTGCTCGGTGCCAATCTGGGCCAGATCGTTGCCTTGCGTCAGCTTGGCGCACCACT GGTGAGCAGCACAATGGGCTGGCGCCTGATCAGTGCGCTGGCGCTGGCCGCATTCCTGCTTGGCGAAGCATTGCAGAGCG TCTGGCAGGTGTTGGGGGCTGTGATTGTGCTGGTAACGATTACCGTGTATCTACGCCGGCAGTATCGCGTCTGA
Upstream 100 bases:
>100_bases CCCTCCTCCACCCTCCCCCCTATTTCCTATCTTCTCTACCCTATTTCCTATCTCCTCCCCCTATCTTCTCCTTTCTATTG ACAAGTCAATCTTTGCTATA
Downstream 100 bases:
>100_bases GGTCAGCTTGAGGAACGTATGAGTACCGTCATTCGCACATTATCCGTTGCTCCGCTCGACATCCCGCTGCGCAGTCCGTT CGGGATTGCCGGCGGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSPMNNASSTATTTTRTGVSWLWLTVALFAHTGWGAYPVLARYLQTISHLPSMAILALGNALALVVYLPFAYRHINASLW RTPIIWLFALVVSIRAMTNLTSARFTLAIYVQLITLLTPLIVALLSKLLFRERLPPFTLPAIGLSIFGSLLMMSGDVSSG VILRLTGSDLIGIAIAFVSACALALYMLLIPRATSAGHVSAEAMLFVQLVALTITCGAMSLLLREPWSRFAAIGLLDWIV FAAFVIFVLLGANLGQIVALRQLGAPLVSSTMGWRLISALALAAFLLGEALQSVWQVLGAVIVLVTITVYLRRQYRV
Sequences:
>Translated_317_residues MSPMNNASSTATTTTRTGVSWLWLTVALFAHTGWGAYPVLARYLQTISHLPSMAILALGNALALVVYLPFAYRHINASLW RTPIIWLFALVVSIRAMTNLTSARFTLAIYVQLITLLTPLIVALLSKLLFRERLPPFTLPAIGLSIFGSLLMMSGDVSSG VILRLTGSDLIGIAIAFVSACALALYMLLIPRATSAGHVSAEAMLFVQLVALTITCGAMSLLLREPWSRFAAIGLLDWIV FAAFVIFVLLGANLGQIVALRQLGAPLVSSTMGWRLISALALAAFLLGEALQSVWQVLGAVIVLVTITVYLRRQYRV >Mature_316_residues SPMNNASSTATTTTRTGVSWLWLTVALFAHTGWGAYPVLARYLQTISHLPSMAILALGNALALVVYLPFAYRHINASLWR TPIIWLFALVVSIRAMTNLTSARFTLAIYVQLITLLTPLIVALLSKLLFRERLPPFTLPAIGLSIFGSLLMMSGDVSSGV ILRLTGSDLIGIAIAFVSACALALYMLLIPRATSAGHVSAEAMLFVQLVALTITCGAMSLLLREPWSRFAAIGLLDWIVF AAFVIFVLLGANLGQIVALRQLGAPLVSSTMGWRLISALALAAFLLGEALQSVWQVLGAVIVLVTITVYLRRQYRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34288; Mature: 34157
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPMNNASSTATTTTRTGVSWLWLTVALFAHTGWGAYPVLARYLQTISHLPSMAILALGN CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHH ALALVVYLPFAYRHINASLWRTPIIWLFALVVSIRAMTNLTSARFTLAIYVQLITLLTPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVALLSKLLFRERLPPFTLPAIGLSIFGSLLMMSGDVSSGVILRLTGSDLIGIAIAFVSA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH CALALYMLLIPRATSAGHVSAEAMLFVQLVALTITCGAMSLLLREPWSRFAAIGLLDWIV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAAFVIFVLLGANLGQIVALRQLGAPLVSSTMGWRLISALALAAFLLGEALQSVWQVLGA HHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIVLVTITVYLRRQYRV HHHHHHHHHHHHHHHCC >Mature Secondary Structure SPMNNASSTATTTTRTGVSWLWLTVALFAHTGWGAYPVLARYLQTISHLPSMAILALGN CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHH ALALVVYLPFAYRHINASLWRTPIIWLFALVVSIRAMTNLTSARFTLAIYVQLITLLTPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVALLSKLLFRERLPPFTLPAIGLSIFGSLLMMSGDVSSGVILRLTGSDLIGIAIAFVSA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH CALALYMLLIPRATSAGHVSAEAMLFVQLVALTITCGAMSLLLREPWSRFAAIGLLDWIV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAAFVIFVLLGANLGQIVALRQLGAPLVSSTMGWRLISALALAAFLLGEALQSVWQVLGA HHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIVLVTITVYLRRQYRV HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA