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The map label for this gene is 222525161

Identifier: 222525161

GI number: 222525161

Start: 2403361

End: 2404293

Strand: Reverse

Name: 222525161

Synonym: Chy400_1899

Alternate gene names: NA

Gene position: 2404293-2403361 (Counterclockwise)

Preceding gene: 222525169

Following gene: 222525160

Centisome position: 45.63

GC content: 57.66

Gene sequence:

>933_bases
ATGATCGCCGTTTTAGTTGATGTCCTCTTGCCGATTGCTGTCGTAGCAAGCGCAGGATTTGCGCTCCGTCGCGCCTTACC
GCTCGATCTGATGACGCTTAATCGGTTGATGATCTACGGTCTCAGTCCGGCCCTCATCTTTGTCGCTTTGCTCCGCGCCG
ATCTCAGCGGGCCGGATGCCGGGCGTATGCTGTTTTTTTCGGTTGGCGTGATTGGGCTGATGGCGATCACGGTCTGGCTG
AGCGCTATGGCACTGCGCCTGCGTGGCAAAGAGGTAACGGCGCTCTTGCTGACCAGCATGTTCATGAATTCGGGGAATTA
CGGCCTGCCCGCGTCACGTTTTGCCTTCGGTGAAACCGGGTTTACGTTGGGTGTTTTCTACTTTATCATGCAGTCAATCA
TGGCCCAAACGTTAGGGGTAGGCGTGGCCGCTGCGGGTGCTGCCGGGGGTGGACGACGGGCCTGGCGTCAGGTTGGCAAC
CGTTTGCTCCATATGCCCCAAATCTACGCCGTTGCCGGAGCACTGCTGCTGCGAGGATTGGGATTTCATCCAGCAACTGC
AACCGGTGTCGCCCGTAGTCTCTTTGAAGGCGTGGCGTTGCTCAGTGAAGCGGCGCTGCCGGTGATGCTGCTCATTCTTG
GGGTGCAGTTGGGAGCCGGGGCGCCGATTGTACAACCGACGATGGTGGCCTTCGCTACTGCGATCCGGCTGGTTGTATCA
CCCATACTGGCGTTTGGCCTGGGACGCCTGCTTGGAATGGATGGTGTGGCATTAGGGGTTGGGGTGATGATGGCCGGGAT
GCCGACCGCAGTCAATACGACGATTCTGGCAATTGAGTTTGACACCCGACCGCAACTGGTGGTAAGTACCGTTGTAGTCT
CATCATTTGCCAGTCTGGTAACGCTGAGTGTGTTGTTGAGTCTGGTACGGTAG

Upstream 100 bases:

>100_bases
GCTGAGGCAGGGTTTAGCATCTCCCTGGCATTCCCATCACCTGACACACCGATCTATGCTATGATATTTGACTTGTAAGA
TATTGTTGACCGGGGATGCC

Downstream 100 bases:

>100_bases
GAAGGTACGATGGATCTCATTCTGCGCAATGTTCGCTTTCCCGGTCAATCGGTTGCCCAGGCTATCGCGATTCGCGGTGA
ACGCATTACCTGGATTGGTC

Product: auxin efflux carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MIAVLVDVLLPIAVVASAGFALRRALPLDLMTLNRLMIYGLSPALIFVALLRADLSGPDAGRMLFFSVGVIGLMAITVWL
SAMALRLRGKEVTALLLTSMFMNSGNYGLPASRFAFGETGFTLGVFYFIMQSIMAQTLGVGVAAAGAAGGGRRAWRQVGN
RLLHMPQIYAVAGALLLRGLGFHPATATGVARSLFEGVALLSEAALPVMLLILGVQLGAGAPIVQPTMVAFATAIRLVVS
PILAFGLGRLLGMDGVALGVGVMMAGMPTAVNTTILAIEFDTRPQLVVSTVVVSSFASLVTLSVLLSLVR

Sequences:

>Translated_310_residues
MIAVLVDVLLPIAVVASAGFALRRALPLDLMTLNRLMIYGLSPALIFVALLRADLSGPDAGRMLFFSVGVIGLMAITVWL
SAMALRLRGKEVTALLLTSMFMNSGNYGLPASRFAFGETGFTLGVFYFIMQSIMAQTLGVGVAAAGAAGGGRRAWRQVGN
RLLHMPQIYAVAGALLLRGLGFHPATATGVARSLFEGVALLSEAALPVMLLILGVQLGAGAPIVQPTMVAFATAIRLVVS
PILAFGLGRLLGMDGVALGVGVMMAGMPTAVNTTILAIEFDTRPQLVVSTVVVSSFASLVTLSVLLSLVR
>Mature_310_residues
MIAVLVDVLLPIAVVASAGFALRRALPLDLMTLNRLMIYGLSPALIFVALLRADLSGPDAGRMLFFSVGVIGLMAITVWL
SAMALRLRGKEVTALLLTSMFMNSGNYGLPASRFAFGETGFTLGVFYFIMQSIMAQTLGVGVAAAGAAGGGRRAWRQVGN
RLLHMPQIYAVAGALLLRGLGFHPATATGVARSLFEGVALLSEAALPVMLLILGVQLGAGAPIVQPTMVAFATAIRLVVS
PILAFGLGRLLGMDGVALGVGVMMAGMPTAVNTTILAIEFDTRPQLVVSTVVVSSFASLVTLSVLLSLVR

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 32242; Mature: 32242

Theoretical pI: Translated: 11.65; Mature: 11.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVLVDVLLPIAVVASAGFALRRALPLDLMTLNRLMIYGLSPALIFVALLRADLSGPDA
CHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
GRMLFFSVGVIGLMAITVWLSAMALRLRGKEVTALLLTSMFMNSGNYGLPASRFAFGETG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC
FTLGVFYFIMQSIMAQTLGVGVAAAGAAGGGRRAWRQVGNRLLHMPQIYAVAGALLLRGL
HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
GFHPATATGVARSLFEGVALLSEAALPVMLLILGVQLGAGAPIVQPTMVAFATAIRLVVS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
PILAFGLGRLLGMDGVALGVGVMMAGMPTAVNTTILAIEFDTRPQLVVSTVVVSSFASLV
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHCCEEEEEEECCCCHHHHHHHHHHHHHHHH
TLSVLLSLVR
HHHHHHHHHC
>Mature Secondary Structure
MIAVLVDVLLPIAVVASAGFALRRALPLDLMTLNRLMIYGLSPALIFVALLRADLSGPDA
CHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
GRMLFFSVGVIGLMAITVWLSAMALRLRGKEVTALLLTSMFMNSGNYGLPASRFAFGETG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC
FTLGVFYFIMQSIMAQTLGVGVAAAGAAGGGRRAWRQVGNRLLHMPQIYAVAGALLLRGL
HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
GFHPATATGVARSLFEGVALLSEAALPVMLLILGVQLGAGAPIVQPTMVAFATAIRLVVS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
PILAFGLGRLLGMDGVALGVGVMMAGMPTAVNTTILAIEFDTRPQLVVSTVVVSSFASLV
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHCCEEEEEEECCCCHHHHHHHHHHHHHHHH
TLSVLLSLVR
HHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]