| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525169
Identifier: 222525169
GI number: 222525169
Start: 2412272
End: 2413363
Strand: Reverse
Name: 222525169
Synonym: Chy400_1907
Alternate gene names: NA
Gene position: 2413363-2412272 (Counterclockwise)
Preceding gene: 222525170
Following gene: 222525161
Centisome position: 45.8
GC content: 57.6
Gene sequence:
>1092_bases ATGTTGATCTGGTGGCTTGATCCATTTCATGGTGGGTCACACGCAGCAGTAGCAAGCGGCTATGCTGCCCATAGCACCCA CCGCGTCAGACTCATCACCCTCAGTCAGGCCGGCGGATGGCGCTGGCGAATGCGCGGCGGGGCAGTGACCCTGGCTCGCC TGGTAGCCGATTTGTCTGAATGGCCTGATGTCATCGTTGCCACTGATATGCTCGATCTGGCGACCTTTCGGGCGTTGACC TATCGCCAATTGGGGCACATTCCGGTAGCACTCTATTTTCACGAAAACCAGCTTACGTATCCCATCCCGCCAGAGCGCAA GCGCGACTACACATTTGCCTGGATCAATTTCACCAGTGCTCTGGTAGCCGATACCGTGTTGTTCAATTCCGCTTTTCATC GGCGAGACTGGCTGGCGGCGCTGCCGGGCATGCTCCGCCGCTATCACGATTACCACGAACTACAGACCGTCGAGCAGATT GCGGCAAAAGCGCAGGTGTTACCACCCGGTCTTGATCTGCCACCGCTACCGCCACGGCAACCGCGTGACCCAACCGCACC ACCGGTTATCCTTTGGAATGCCCGTTGGGAGTATGATAAACAGCCGCACGTTGTAATGGCTGCTCTGGAATATCTGGCAG AGCGTGGGGTACGATTTCGCCTGATTGTGACCGGTGAGCATATTGATCCAACTGCCCCTGATCTGATAGCTGCCCGCCGG CGCTGGGCAGATCACACCATTCACTGGGGCTATGCCGGAGATCGCCAGACATACCTCGCATTATTACGTCAGGCCGATAT TGTTGTGTCGGCAGCGATTCAGGAATATTTTGGGATTGCGATCCTTGAAGCAATCGCCTGTGGTTGTGTGCCACTTTTGC CGGCACGGCTCAACTACCCTGATCTGATTCCGCCGGAATGGCACGCCGACTGTCTTTACGCAGACGATGCCGATTTGCCG AACGCACTTGCGCGATTGATCGGCGACCTGCCACGGCTGACGCGCTACGATTGGTCGGCAGTGGCCCGCCCTTACCGCTG GGAAAGCCTGGTTGCGCAGTATGATGCAACACTGGCGGCACTGGTGCGGTGA
Upstream 100 bases:
>100_bases CAGCTTGAGGCTCAATTAGGTATCGAAGGCGTGAATCGCTATATGATGCGGGTGGATATTGAGTGACAACCTTCGCCAGG ACTCACTGAGATACCGGGAC
Downstream 100 bases:
>100_bases GGTGTAGAGGTTCAGGCTGGCTCTGTCAGCAGATGTATTCTGTCACAGATGGCGTCATGATACACTGTTCAGATGGCAAG CGTGATCTTGCATCTTGCTG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyltransferase-Like Protein; Glycosyltransferase Family 4 Domain Protein; Glycosyl Transferase Group 1 Family Protein
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MLIWWLDPFHGGSHAAVASGYAAHSTHRVRLITLSQAGGWRWRMRGGAVTLARLVADLSEWPDVIVATDMLDLATFRALT YRQLGHIPVALYFHENQLTYPIPPERKRDYTFAWINFTSALVADTVLFNSAFHRRDWLAALPGMLRRYHDYHELQTVEQI AAKAQVLPPGLDLPPLPPRQPRDPTAPPVILWNARWEYDKQPHVVMAALEYLAERGVRFRLIVTGEHIDPTAPDLIAARR RWADHTIHWGYAGDRQTYLALLRQADIVVSAAIQEYFGIAILEAIACGCVPLLPARLNYPDLIPPEWHADCLYADDADLP NALARLIGDLPRLTRYDWSAVARPYRWESLVAQYDATLAALVR
Sequences:
>Translated_363_residues MLIWWLDPFHGGSHAAVASGYAAHSTHRVRLITLSQAGGWRWRMRGGAVTLARLVADLSEWPDVIVATDMLDLATFRALT YRQLGHIPVALYFHENQLTYPIPPERKRDYTFAWINFTSALVADTVLFNSAFHRRDWLAALPGMLRRYHDYHELQTVEQI AAKAQVLPPGLDLPPLPPRQPRDPTAPPVILWNARWEYDKQPHVVMAALEYLAERGVRFRLIVTGEHIDPTAPDLIAARR RWADHTIHWGYAGDRQTYLALLRQADIVVSAAIQEYFGIAILEAIACGCVPLLPARLNYPDLIPPEWHADCLYADDADLP NALARLIGDLPRLTRYDWSAVARPYRWESLVAQYDATLAALVR >Mature_363_residues MLIWWLDPFHGGSHAAVASGYAAHSTHRVRLITLSQAGGWRWRMRGGAVTLARLVADLSEWPDVIVATDMLDLATFRALT YRQLGHIPVALYFHENQLTYPIPPERKRDYTFAWINFTSALVADTVLFNSAFHRRDWLAALPGMLRRYHDYHELQTVEQI AAKAQVLPPGLDLPPLPPRQPRDPTAPPVILWNARWEYDKQPHVVMAALEYLAERGVRFRLIVTGEHIDPTAPDLIAARR RWADHTIHWGYAGDRQTYLALLRQADIVVSAAIQEYFGIAILEAIACGCVPLLPARLNYPDLIPPEWHADCLYADDADLP NALARLIGDLPRLTRYDWSAVARPYRWESLVAQYDATLAALVR
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI54859763, Length=172, Percent_Identity=31.9767441860465, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI257467510, Length=172, Percent_Identity=31.9767441860465, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI40254965, Length=379, Percent_Identity=24.2744063324538, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI24642323, Length=341, Percent_Identity=31.6715542521994, Blast_Score=167, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41198; Mature: 41198
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIWWLDPFHGGSHAAVASGYAAHSTHRVRLITLSQAGGWRWRMRGGAVTLARLVADLSE CEEEEECCCCCCCCHHHHCCCHHCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHH WPDVIVATDMLDLATFRALTYRQLGHIPVALYFHENQLTYPIPPERKRDYTFAWINFTSA CCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCEEEEEEEHHHH LVADTVLFNSAFHRRDWLAALPGMLRRYHDYHELQTVEQIAAKAQVLPPGLDLPPLPPRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PRDPTAPPVILWNARWEYDKQPHVVMAALEYLAERGVRFRLIVTGEHIDPTAPDLIAARR CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHH RWADHTIHWGYAGDRQTYLALLRQADIVVSAAIQEYFGIAILEAIACGCVPLLPARLNYP HHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC DLIPPEWHADCLYADDADLPNALARLIGDLPRLTRYDWSAVARPYRWESLVAQYDATLAA CCCCCCCCCCEEECCCCCHHHHHHHHHHCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHH LVR HCC >Mature Secondary Structure MLIWWLDPFHGGSHAAVASGYAAHSTHRVRLITLSQAGGWRWRMRGGAVTLARLVADLSE CEEEEECCCCCCCCHHHHCCCHHCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHH WPDVIVATDMLDLATFRALTYRQLGHIPVALYFHENQLTYPIPPERKRDYTFAWINFTSA CCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCEEEEEEEHHHH LVADTVLFNSAFHRRDWLAALPGMLRRYHDYHELQTVEQIAAKAQVLPPGLDLPPLPPRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PRDPTAPPVILWNARWEYDKQPHVVMAALEYLAERGVRFRLIVTGEHIDPTAPDLIAARR CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHH RWADHTIHWGYAGDRQTYLALLRQADIVVSAAIQEYFGIAILEAIACGCVPLLPARLNYP HHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC DLIPPEWHADCLYADDADLPNALARLIGDLPRLTRYDWSAVARPYRWESLVAQYDATLAA CCCCCCCCCCEEECCCCCHHHHHHHHHHCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHH LVR HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA