| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222525108
Identifier: 222525108
GI number: 222525108
Start: 2332946
End: 2333512
Strand: Reverse
Name: 222525108
Synonym: Chy400_1846
Alternate gene names: NA
Gene position: 2333512-2332946 (Counterclockwise)
Preceding gene: 222525111
Following gene: 222525103
Centisome position: 44.29
GC content: 56.44
Gene sequence:
>567_bases ATGATTCGTCGCGTGCGTACCTATCTTGCCACCCAATGGCAACGGTTTTTCGGTTTGAATATCTCTCTCGTTACCCCAAT GCTCTTCGTCGGCGGTCAGTTTAGTGCTCAACAATGGCCTGCTATTCATCAGCTCGGTGTGCGGGCAGTGCTCTCGCTAC AAGCCGAGCGAGCTGATCCCTTTCGCGAGCCGCTGCCGGCGCGCAGTTTACGGTTACTGGTACCAGATTTCCATCCACCA ACGATTGAACAGCTTGATGAAGGGGTGCATTTTATTGCTCAGGCGATTAGCGATGGCTTACCGGTGTTTGTCCATTGCCA CGCCGGTGTCGGCAGAGCACCATTGATGACGGCGGCATATCTGATGGCCCATCATGGTATCGGTCATCGGGCGGCACTCG CCACCTTGCGCATGGCACGTCCCATTATTCGGCCTAACCGGCGTCAACTGCGTCAACTTCAGGCATACGAGCAAATACTG GCTCGTCGCCGACGATCCAGTCAGTTTACGCCGCCCGCTGACGATAGAGGCTACTGGCCGCCAGCTCCAGACACCCAGAC ACCGTGA
Upstream 100 bases:
>100_bases GAATCGTTGTTGCCTGGAGATCGACAGGTTTTCGAAATGGCCACATAGCTGTGTTACCATACTTACGGAGTCTGAGTTTG TATTGTACCAGAGAAGTCTT
Downstream 100 bases:
>100_bases AGAGATCAACAAAGGCCAGCAGGGAAAGGCGTGGCTGCGCACAAATGTAGACCGGTCGCCAGACGGGGGCAAATTTGGCC TTGAAGTGGTAGAGACCATT
Product: dual specificity protein phosphatase
Products: NA
Alternate protein names: Ducificity Phosphatase
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MIRRVRTYLATQWQRFFGLNISLVTPMLFVGGQFSAQQWPAIHQLGVRAVLSLQAERADPFREPLPARSLRLLVPDFHPP TIEQLDEGVHFIAQAISDGLPVFVHCHAGVGRAPLMTAAYLMAHHGIGHRAALATLRMARPIIRPNRRQLRQLQAYEQIL ARRRRSSQFTPPADDRGYWPPAPDTQTP
Sequences:
>Translated_188_residues MIRRVRTYLATQWQRFFGLNISLVTPMLFVGGQFSAQQWPAIHQLGVRAVLSLQAERADPFREPLPARSLRLLVPDFHPP TIEQLDEGVHFIAQAISDGLPVFVHCHAGVGRAPLMTAAYLMAHHGIGHRAALATLRMARPIIRPNRRQLRQLQAYEQIL ARRRRSSQFTPPADDRGYWPPAPDTQTP >Mature_188_residues MIRRVRTYLATQWQRFFGLNISLVTPMLFVGGQFSAQQWPAIHQLGVRAVLSLQAERADPFREPLPARSLRLLVPDFHPP TIEQLDEGVHFIAQAISDGLPVFVHCHAGVGRAPLMTAAYLMAHHGIGHRAALATLRMARPIIRPNRRQLRQLQAYEQIL ARRRRSSQFTPPADDRGYWPPAPDTQTP
Specific function: Unknown
COG id: COG2453
COG function: function code T; Predicted protein-tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56786144, Length=127, Percent_Identity=37.7952755905512, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI6005956, Length=143, Percent_Identity=32.1678321678322, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24666604, Length=151, Percent_Identity=27.8145695364238, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24666600, Length=151, Percent_Identity=27.8145695364238, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI24651281, Length=147, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21293; Mature: 21293
Theoretical pI: Translated: 11.86; Mature: 11.86
Prosite motif: PS50056 TYR_PHOSPHATASE_2 ; PS50054 TYR_PHOSPHATASE_DUAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRVRTYLATQWQRFFGLNISLVTPMLFVGGQFSAQQWPAIHQLGVRAVLSLQAERADP CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHCHHHHHHHHHHHHHHHHHHCCC FREPLPARSLRLLVPDFHPPTIEQLDEGVHFIAQAISDGLPVFVHCHAGVGRAPLMTAAY CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH LMAHHGIGHRAALATLRMARPIIRPNRRQLRQLQAYEQILARRRRSSQFTPPADDRGYWP HHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PAPDTQTP CCCCCCCC >Mature Secondary Structure MIRRVRTYLATQWQRFFGLNISLVTPMLFVGGQFSAQQWPAIHQLGVRAVLSLQAERADP CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHCHHHHHHHHHHHHHHHHHHCCC FREPLPARSLRLLVPDFHPPTIEQLDEGVHFIAQAISDGLPVFVHCHAGVGRAPLMTAAY CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH LMAHHGIGHRAALATLRMARPIIRPNRRQLRQLQAYEQILARRRRSSQFTPPADDRGYWP HHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PAPDTQTP CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA