| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525097
Identifier: 222525097
GI number: 222525097
Start: 2324150
End: 2325220
Strand: Reverse
Name: 222525097
Synonym: Chy400_1835
Alternate gene names: NA
Gene position: 2325220-2324150 (Counterclockwise)
Preceding gene: 222525098
Following gene: 222525096
Centisome position: 44.13
GC content: 59.2
Gene sequence:
>1071_bases ATGACAACCACTGTCAATGAATCTGGTGTTCGAGCCAATCCGGCTGAAGCGCGTGAATTAGTCGAACGCGGGATCGCCGC CGCACGCGGTGGTCAGCGCCGTGTTGCGGCGGGATTGCTGGCACGTGCTTTGAAGCTCGATCCGCGCGACGAACGGGCAT GGCTGTGGCTGAGCGGTGTCGTTGATGATCCGGCCCAACGTGCGTTTTGCTTACAGGCCGTGTTGCGTATCAATCCACAA AACCCTCACGCCCGCCGTGGCCTGGCCTACCTCGAACGACAAGGAACGGTAAACGCACGTCCGATAGCCGATCTGAGTGT ACCGGCGGCTGCACCGGAAACAACGACTGAAACGCCTGCTACGCCGGCAACATCGCCGGCGAAAGATACGGCACACCGCG ACTGGTGGTTGCACTGGCGCTGGCAACATCGCGAAACATCACGGGTGCGGCTCGTGCTCTGGATTTTGCCGATTGTGTTG CTGTCAGTAGCAGTCTTCCTGCATCAAAGTGTGAGTATTGCCCGCGAGCAAGCGCTGGCAGCGCTGGCTGCCGAACAAGC GTCGGCTTTTACTGTGGAGTCACCATCAGTTGTAGCTGTTGCTACCCCTACGCCTATCCCGGCACTCGAAGCAGAGCCAC TGGCAGTGGTTGAGAGTCTGACCGTCTCTTACCTCAGTGCAGTTGAGGCGATACGTGCCGATCTCCGCACAGCGACGATG ACGTATCGTCAAGAGACCAGCCAGCCCGGCGGCGCCTCAGTTAACCACGTTGCAGCCACGCAACGGTTGCGATCAACGGT TGCGCAGGCGTTGGCCAATTTGGGAGAGCTACGTGTACCGGGTGTCCTGCTGCCGGCCCACGAAGACTACCGCCGTGGCC TTGAGCTGGAACTGGCCGGGCTGGATGCGATTCTGGAGTTTTACAGCACGTATGATGTCGCTCATGCCAATCGCGCTGCC CTGCGTTTTCAAGAGGCACGAGCGTTTATCGAACGAGCACAGGTCGGGTTCCAGGCCCAGCTTCAACTCTTAGGCGAAGA GAGTTTGATAAGCGCGTACACCATTCGGTAG
Upstream 100 bases:
>100_bases TTACCTGGTGTAGATGTGCAATCTCGTTGCCCACGATAACCGATATGTTACAGTAACCCATAACATATCATGGCGGGCAG CGCTACATAACGAGATCGCA
Downstream 100 bases:
>100_bases GCAAATCCCCAACGCCACATATGGCGCGTGGTCGGGTCGATGCCTGCACGATCTGTACCACCGGTTAGGCGAAAGCAATG CTGTTGGCTTTCCCAAATCG
Product: tetratricopeptide repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTTTVNESGVRANPAEARELVERGIAAARGGQRRVAAGLLARALKLDPRDERAWLWLSGVVDDPAQRAFCLQAVLRINPQ NPHARRGLAYLERQGTVNARPIADLSVPAAAPETTTETPATPATSPAKDTAHRDWWLHWRWQHRETSRVRLVLWILPIVL LSVAVFLHQSVSIAREQALAALAAEQASAFTVESPSVVAVATPTPIPALEAEPLAVVESLTVSYLSAVEAIRADLRTATM TYRQETSQPGGASVNHVAATQRLRSTVAQALANLGELRVPGVLLPAHEDYRRGLELELAGLDAILEFYSTYDVAHANRAA LRFQEARAFIERAQVGFQAQLQLLGEESLISAYTIR
Sequences:
>Translated_356_residues MTTTVNESGVRANPAEARELVERGIAAARGGQRRVAAGLLARALKLDPRDERAWLWLSGVVDDPAQRAFCLQAVLRINPQ NPHARRGLAYLERQGTVNARPIADLSVPAAAPETTTETPATPATSPAKDTAHRDWWLHWRWQHRETSRVRLVLWILPIVL LSVAVFLHQSVSIAREQALAALAAEQASAFTVESPSVVAVATPTPIPALEAEPLAVVESLTVSYLSAVEAIRADLRTATM TYRQETSQPGGASVNHVAATQRLRSTVAQALANLGELRVPGVLLPAHEDYRRGLELELAGLDAILEFYSTYDVAHANRAA LRFQEARAFIERAQVGFQAQLQLLGEESLISAYTIR >Mature_355_residues TTTVNESGVRANPAEARELVERGIAAARGGQRRVAAGLLARALKLDPRDERAWLWLSGVVDDPAQRAFCLQAVLRINPQN PHARRGLAYLERQGTVNARPIADLSVPAAAPETTTETPATPATSPAKDTAHRDWWLHWRWQHRETSRVRLVLWILPIVLL SVAVFLHQSVSIAREQALAALAAEQASAFTVESPSVVAVATPTPIPALEAEPLAVVESLTVSYLSAVEAIRADLRTATMT YRQETSQPGGASVNHVAATQRLRSTVAQALANLGELRVPGVLLPAHEDYRRGLELELAGLDAILEFYSTYDVAHANRAAL RFQEARAFIERAQVGFQAQLQLLGEESLISAYTIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38810; Mature: 38678
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTVNESGVRANPAEARELVERGIAAARGGQRRVAAGLLARALKLDPRDERAWLWLSGV CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECC VDDPAQRAFCLQAVLRINPQNPHARRGLAYLERQGTVNARPIADLSVPAAAPETTTETPA CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC TPATSPAKDTAHRDWWLHWRWQHRETSRVRLVLWILPIVLLSVAVFLHQSVSIAREQALA CCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAAEQASAFTVESPSVVAVATPTPIPALEAEPLAVVESLTVSYLSAVEAIRADLRTATM HHHHHHCCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYRQETSQPGGASVNHVAATQRLRSTVAQALANLGELRVPGVLLPAHEDYRRGLELELAG HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHCCCEEEEHH LDAILEFYSTYDVAHANRAALRFQEARAFIERAQVGFQAQLQLLGEESLISAYTIR HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHEECC >Mature Secondary Structure TTTVNESGVRANPAEARELVERGIAAARGGQRRVAAGLLARALKLDPRDERAWLWLSGV CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECC VDDPAQRAFCLQAVLRINPQNPHARRGLAYLERQGTVNARPIADLSVPAAAPETTTETPA CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC TPATSPAKDTAHRDWWLHWRWQHRETSRVRLVLWILPIVLLSVAVFLHQSVSIAREQALA CCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAAEQASAFTVESPSVVAVATPTPIPALEAEPLAVVESLTVSYLSAVEAIRADLRTATM HHHHHHCCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYRQETSQPGGASVNHVAATQRLRSTVAQALANLGELRVPGVLLPAHEDYRRGLELELAG HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHCCCEEEEHH LDAILEFYSTYDVAHANRAALRFQEARAFIERAQVGFQAQLQLLGEESLISAYTIR HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA