| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525093
Identifier: 222525093
GI number: 222525093
Start: 2318301
End: 2318879
Strand: Reverse
Name: 222525093
Synonym: Chy400_1831
Alternate gene names: NA
Gene position: 2318879-2318301 (Counterclockwise)
Preceding gene: 222525094
Following gene: 222525092
Centisome position: 44.01
GC content: 56.3
Gene sequence:
>579_bases ATGGATCATAGTGAGCGCCCAATTAGTCGGTTTCCCTATCCTGAGCGACTCGACGACTTGCCGGTTGACATTCGTGAACG TATTGAAAAGGTAGCCGAAAAGAGCGGTTTTATCCCTAACGTCTTCCTGGCTCTGGCGCAACGCCCCGACGAATTTCGCG CCTTTTTTGCTTACCACGATGCGCTGATGGAGCGCCCCTCAAACCTGAGCAAGGCCGAGAAAGAGATGATAGTCGTCGCT ACCTCGGCGGCCAATGATTGTCTGTACTGTGTGATTGCCCACGGCGCCATTCTGCGTATCCGCAGTAAAAATCCGCGGCT GGCCGAGCAGGTTGCAACTAACTATCGACGCGCCGAGATTACGCCCCGTCAGTGCGCCATTCTCGATTATGCGCTAAAAG TGGCCCTGGATTCGGCCCGCATCAGCGAAGAGGACTGGCAACCGCTGATGGCGCACGGCCTGACCCTCGACGACATCTGG GAGATCGGTGCGATAGCGGCGTTCTTCGCAATGAGTAACCGACTGGCCAATATGAGTGCGCTGCGGCCTAACGACGAGTT CTATACGATGGGCCGGTGA
Upstream 100 bases:
>100_bases TACAATCTCTTCTCACCACATCATCATCACCATGTACTGCACGCATTGGCATTCGCGCAGTATAATACCCTTGTTGCCCG GACACGTAAGGAGTAAACCT
Downstream 100 bases:
>100_bases GGGAACCATATTCTCTGATCTTCATTTTCCGGGCCACACCCCGGTAGAGATGGATTATTATGCGCCCGGCAACGATCTCT CGTTATTCTCTGCTCGGCCT
Product: peroxidase-like protein
Products: NA
Alternate protein names: Alkylhydroperoxidase AhpD Family Core Domain Protein; Peroxidase-Like Protein; Alkylhydroperoxidase; Alkylhydroperoxidase AhpD Core; 4-Carboxymuconolactone Decarboxylase; Peroxidase-Like; Carboxymuconolactone Decarboxylase; Peroxidase Family Protein; Peroxidase Related Protein; Alkylhydroperoxidase Ahpd Family Core Domain; Alkylhydroperoxidase AhpD; Peroxidase-Related Subfamily; Peroxidase-Related Protein
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MDHSERPISRFPYPERLDDLPVDIRERIEKVAEKSGFIPNVFLALAQRPDEFRAFFAYHDALMERPSNLSKAEKEMIVVA TSAANDCLYCVIAHGAILRIRSKNPRLAEQVATNYRRAEITPRQCAILDYALKVALDSARISEEDWQPLMAHGLTLDDIW EIGAIAAFFAMSNRLANMSALRPNDEFYTMGR
Sequences:
>Translated_192_residues MDHSERPISRFPYPERLDDLPVDIRERIEKVAEKSGFIPNVFLALAQRPDEFRAFFAYHDALMERPSNLSKAEKEMIVVA TSAANDCLYCVIAHGAILRIRSKNPRLAEQVATNYRRAEITPRQCAILDYALKVALDSARISEEDWQPLMAHGLTLDDIW EIGAIAAFFAMSNRLANMSALRPNDEFYTMGR >Mature_192_residues MDHSERPISRFPYPERLDDLPVDIRERIEKVAEKSGFIPNVFLALAQRPDEFRAFFAYHDALMERPSNLSKAEKEMIVVA TSAANDCLYCVIAHGAILRIRSKNPRLAEQVATNYRRAEITPRQCAILDYALKVALDSARISEEDWQPLMAHGLTLDDIW EIGAIAAFFAMSNRLANMSALRPNDEFYTMGR
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21875; Mature: 21875
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHSERPISRFPYPERLDDLPVDIRERIEKVAEKSGFIPNVFLALAQRPDEFRAFFAYHD CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHH ALMERPSNLSKAEKEMIVVATSAANDCLYCVIAHGAILRIRSKNPRLAEQVATNYRRAEI HHHHCCCCCCHHHHCEEEEEECCCCCCEEHEECCCEEEEEECCCCHHHHHHHHCCHHCCC TPRQCAILDYALKVALDSARISEEDWQPLMAHGLTLDDIWEIGAIAAFFAMSNRLANMSA CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC LRPNDEFYTMGR CCCCCCEEECCC >Mature Secondary Structure MDHSERPISRFPYPERLDDLPVDIRERIEKVAEKSGFIPNVFLALAQRPDEFRAFFAYHD CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHH ALMERPSNLSKAEKEMIVVATSAANDCLYCVIAHGAILRIRSKNPRLAEQVATNYRRAEI HHHHCCCCCCHHHHCEEEEEECCCCCCEEHEECCCEEEEEECCCCHHHHHHHHCCHHCCC TPRQCAILDYALKVALDSARISEEDWQPLMAHGLTLDDIWEIGAIAAFFAMSNRLANMSA CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC LRPNDEFYTMGR CCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA