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The map label for this gene is yrbE [H]

Identifier: 222525033

GI number: 222525033

Start: 2236468

End: 2237478

Strand: Direct

Name: yrbE [H]

Synonym: Chy400_1769

Alternate gene names: 222525033

Gene position: 2236468-2237478 (Clockwise)

Preceding gene: 222525032

Following gene: 222525034

Centisome position: 42.45

GC content: 53.02

Gene sequence:

>1011_bases
ATGGTTGGCATTGGCGTCATCGGGTATGGCTACTGGGGACCCAATCTCGTCCGCAATTTTGCTCAGGTCGCCGGAGCACG
GGTTACCGCGGTGTGTGATCAGCGTGCCGAACGACGGGCGCTGGTCGAACAGGTATACCCGTCGATTCAAACCTATGCTG
ATGTCGCTGATCTATTGCGTAATCCGGCTGTCGACGCGGTGGCCATCGCCACGCCGGTTTCCTCACATTTTGAATTAGCG
CTGATGGCCTTGCAGGCCGGTAAGCACGTGTTGGTTGAGAAACCATTTACTGCTACTGTCATTCAAGCCGAGCGATTGGT
AGAGGAGGCTGAGCGCCGTGGATTGACACTGATGGTTGATCACACCTTTATCTTCACCAGTGCGGTGCGCAAGATTAAAG
AATTGATCGATAACGGTACGCTCGGCACGCTCTACTACTACGATTCGGTGCGCGTGAATCTGGGTCTCTTCCAGAATGAT
GTCAATGTTCTCTGGGACCTGGCAGTACACGATCTGTCGATCATGGATTATCTGGTCGGGGCAATGCCGACGATGGTAGC
TGCTACCGGTATGGCCCACGTGCCGGGAAAACCGGAAAATATGGCGTATCTGACCTGTTATTTCGCCCATAACTTGATTG
CCCATTTTCATGTGAACTGGATGGCACCGGTGAAAATACGACAAACGCTCATCGGTGGTTCGGAGAAGATGATCGTCTAT
GACGATATTGAAATGAGTGAGAAGGTCAAGGTCTACGACAAGGGCATCATTGTCAGTGAAAGCGAAGATGCGGTGTATCA
ACGCCATGTTGGCTACCGCACCGGTGATATGTGGGCACCACGACTCGATAACATCGAGGCCCTGCGTATCGAAGCAGAGC
ATTTTGTGGAATGTGTGACAACCGGTCGCCGTCCACTATCCGATGGTCATGCTGGTTTGCGGGTTGTCCGCATTCTGGAA
GCAGCTTCGCAATCGATGGCGCAACGAGGACAGCCGATTGCGCTCTCTTGA

Upstream 100 bases:

>100_bases
CTTCATTCACAAGTTCATCATCTCGTGAGACTATCATTCCAGGTGCAAGCAGCCGAAGGCTGTTCATATCAAAGCTGAAT
CTCTAAAGGCAGGTGTCATC

Downstream 100 bases:

>100_bases
AGGAATGATGCGGTGGGCTGGTAATACAGAGGGCGTATGATGGTGTGTAATCATGATGGTGAAGGGAGAACCGTATGATC
CCGTTTGTGGATTTGAAAGC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MVGIGVIGYGYWGPNLVRNFAQVAGARVTAVCDQRAERRALVEQVYPSIQTYADVADLLRNPAVDAVAIATPVSSHFELA
LMALQAGKHVLVEKPFTATVIQAERLVEEAERRGLTLMVDHTFIFTSAVRKIKELIDNGTLGTLYYYDSVRVNLGLFQND
VNVLWDLAVHDLSIMDYLVGAMPTMVAATGMAHVPGKPENMAYLTCYFAHNLIAHFHVNWMAPVKIRQTLIGGSEKMIVY
DDIEMSEKVKVYDKGIIVSESEDAVYQRHVGYRTGDMWAPRLDNIEALRIEAEHFVECVTTGRRPLSDGHAGLRVVRILE
AASQSMAQRGQPIALS

Sequences:

>Translated_336_residues
MVGIGVIGYGYWGPNLVRNFAQVAGARVTAVCDQRAERRALVEQVYPSIQTYADVADLLRNPAVDAVAIATPVSSHFELA
LMALQAGKHVLVEKPFTATVIQAERLVEEAERRGLTLMVDHTFIFTSAVRKIKELIDNGTLGTLYYYDSVRVNLGLFQND
VNVLWDLAVHDLSIMDYLVGAMPTMVAATGMAHVPGKPENMAYLTCYFAHNLIAHFHVNWMAPVKIRQTLIGGSEKMIVY
DDIEMSEKVKVYDKGIIVSESEDAVYQRHVGYRTGDMWAPRLDNIEALRIEAEHFVECVTTGRRPLSDGHAGLRVVRILE
AASQSMAQRGQPIALS
>Mature_336_residues
MVGIGVIGYGYWGPNLVRNFAQVAGARVTAVCDQRAERRALVEQVYPSIQTYADVADLLRNPAVDAVAIATPVSSHFELA
LMALQAGKHVLVEKPFTATVIQAERLVEEAERRGLTLMVDHTFIFTSAVRKIKELIDNGTLGTLYYYDSVRVNLGLFQND
VNVLWDLAVHDLSIMDYLVGAMPTMVAATGMAHVPGKPENMAYLTCYFAHNLIAHFHVNWMAPVKIRQTLIGGSEKMIVY
DDIEMSEKVKVYDKGIIVSESEDAVYQRHVGYRTGDMWAPRLDNIEALRIEAEHFVECVTTGRRPLSDGHAGLRVVRILE
AASQSMAQRGQPIALS

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=146, Percent_Identity=34.2465753424658, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082405, Length=371, Percent_Identity=25.0673854447439, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789848, Length=167, Percent_Identity=32.9341317365269, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787574, Length=164, Percent_Identity=28.6585365853659, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37261; Mature: 37261

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGIGVIGYGYWGPNLVRNFAQVAGARVTAVCDQRAERRALVEQVYPSIQTYADVADLLR
CEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NPAVDAVAIATPVSSHFELALMALQAGKHVLVEKPFTATVIQAERLVEEAERRGLTLMVD
CCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEE
HTFIFTSAVRKIKELIDNGTLGTLYYYDSVRVNLGLFQNDVNVLWDLAVHDLSIMDYLVG
HHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
AMPTMVAATGMAHVPGKPENMAYLTCYFAHNLIAHFHVNWMAPVKIRQTLIGGSEKMIVY
HHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHEEECEECHHHHHHHHHCCCCEEEEE
DDIEMSEKVKVYDKGIIVSESEDAVYQRHVGYRTGDMWAPRLDNIEALRIEAEHFVECVT
ECCCCCCCEEEEECCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHH
TGRRPLSDGHAGLRVVRILEAASQSMAQRGQPIALS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVGIGVIGYGYWGPNLVRNFAQVAGARVTAVCDQRAERRALVEQVYPSIQTYADVADLLR
CEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NPAVDAVAIATPVSSHFELALMALQAGKHVLVEKPFTATVIQAERLVEEAERRGLTLMVD
CCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEE
HTFIFTSAVRKIKELIDNGTLGTLYYYDSVRVNLGLFQNDVNVLWDLAVHDLSIMDYLVG
HHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
AMPTMVAATGMAHVPGKPENMAYLTCYFAHNLIAHFHVNWMAPVKIRQTLIGGSEKMIVY
HHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHEEECEECHHHHHHHHHCCCCEEEEE
DDIEMSEKVKVYDKGIIVSESEDAVYQRHVGYRTGDMWAPRLDNIEALRIEAEHFVECVT
ECCCCCCCEEEEECCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHH
TGRRPLSDGHAGLRVVRILEAASQSMAQRGQPIALS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]