| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524993
Identifier: 222524993
GI number: 222524993
Start: 2181194
End: 2182078
Strand: Direct
Name: 222524993
Synonym: Chy400_1728
Alternate gene names: NA
Gene position: 2181194-2182078 (Clockwise)
Preceding gene: 222524992
Following gene: 222524994
Centisome position: 41.4
GC content: 54.46
Gene sequence:
>885_bases ATGAACACACGACGCTTTCCTACCGTCTGGGACGCCATACGACGACCACCAGCACGAGCGATGATCTGTCGCTTACGCCG AATCCATCACGAACCTGATAGCCGGCGCAGCCCATTGCTGTTGTTACACGGTTTTCCCGACTCTGAGCACATGTACGATG ACTACGTGACACCGAAGGAACGACGCCAGGACTGGCTGCGCGGGCGAAGTATATATGCGATTGCATTACCCAACCGACGG ACAAATCCAAACTGGCCCTCATTGTCCGATCTCTGGCAGCGCCGTCTCGAGCGTGAGGTAGCAGCTCTGATCGATATTGT CATTGCCGCCAGCCCGACCGGCAACGTTGTGATTATCGCTCACGATTGGGGAGCAACATTTGTCTGGGCACGTGTTCGAC AGCGTCCCGATCTGCCGATTGAGCGCATGGTGGCCCTTTCGGTCGGATCATCGTTTCGTTACGACTTTGGTGAACACGGC ATTGGTGCGTTGGGGTGGTTGTACGGTATGCTGTTTGGGTTGCCGTACTATCTACCACCGGCACGTTTTTTTGTAGCCGC AATGCTCATGCTTAGTGGGTATCGAGCGCCGGATGCGCACAACGCGGCCTATGATAGCTTTCACTATTGGGATTGGCCAT TAACGCTGCTGCGCCTGCCATTACGGTTGGCAGGTTATTGCCAGCAACCACCGTTCACCGATATTCGCTTTCCAGTTCTG TTTATACGCTGCCCGCTTGATCGAATCGCCACAACCGCCCGTTTTGAACAGACGTTACGACAACGAGCAGATTGCATCGT GCACATGACCGCTAATCCACACTGGTTTCCTGAACAACGTTCGGCAGAGGTGTTGGAATTCGTGCGATCATTTCTGGCCG GGTAA
Upstream 100 bases:
>100_bases TGCTCTGTATCATTGGAGCTGTTCTCAGTTTAGCCCCCTTGAGTGCTGCACTCTGGTGGGGGCAATCATCACGACAGGTT GTGACAGGGGCTGATTAACC
Downstream 100 bases:
>100_bases GCTGATGTCTTACGTAGGACAGGGCAAATTGATGGCTCGCCAAACCTGAATACGAAATGGTATGATGGTAGTGGTAAAAA ACACCTGATCCGTTGTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MNTRRFPTVWDAIRRPPARAMICRLRRIHHEPDSRRSPLLLLHGFPDSEHMYDDYVTPKERRQDWLRGRSIYAIALPNRR TNPNWPSLSDLWQRRLEREVAALIDIVIAASPTGNVVIIAHDWGATFVWARVRQRPDLPIERMVALSVGSSFRYDFGEHG IGALGWLYGMLFGLPYYLPPARFFVAAMLMLSGYRAPDAHNAAYDSFHYWDWPLTLLRLPLRLAGYCQQPPFTDIRFPVL FIRCPLDRIATTARFEQTLRQRADCIVHMTANPHWFPEQRSAEVLEFVRSFLAG
Sequences:
>Translated_294_residues MNTRRFPTVWDAIRRPPARAMICRLRRIHHEPDSRRSPLLLLHGFPDSEHMYDDYVTPKERRQDWLRGRSIYAIALPNRR TNPNWPSLSDLWQRRLEREVAALIDIVIAASPTGNVVIIAHDWGATFVWARVRQRPDLPIERMVALSVGSSFRYDFGEHG IGALGWLYGMLFGLPYYLPPARFFVAAMLMLSGYRAPDAHNAAYDSFHYWDWPLTLLRLPLRLAGYCQQPPFTDIRFPVL FIRCPLDRIATTARFEQTLRQRADCIVHMTANPHWFPEQRSAEVLEFVRSFLAG >Mature_294_residues MNTRRFPTVWDAIRRPPARAMICRLRRIHHEPDSRRSPLLLLHGFPDSEHMYDDYVTPKERRQDWLRGRSIYAIALPNRR TNPNWPSLSDLWQRRLEREVAALIDIVIAASPTGNVVIIAHDWGATFVWARVRQRPDLPIERMVALSVGSSFRYDFGEHG IGALGWLYGMLFGLPYYLPPARFFVAAMLMLSGYRAPDAHNAAYDSFHYWDWPLTLLRLPLRLAGYCQQPPFTDIRFPVL FIRCPLDRIATTARFEQTLRQRADCIVHMTANPHWFPEQRSAEVLEFVRSFLAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34270; Mature: 34270
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTRRFPTVWDAIRRPPARAMICRLRRIHHEPDSRRSPLLLLHGFPDSEHMYDDYVTPKE CCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHH RRQDWLRGRSIYAIALPNRRTNPNWPSLSDLWQRRLEREVAALIDIVIAASPTGNVVIIA HHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE HDWGATFVWARVRQRPDLPIERMVALSVGSSFRYDFGEHGIGALGWLYGMLFGLPYYLPP ECCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCH ARFFVAAMLMLSGYRAPDAHNAAYDSFHYWDWPLTLLRLPLRLAGYCQQPPFTDIRFPVL HHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEE FIRCPLDRIATTARFEQTLRQRADCIVHMTANPHWFPEQRSAEVLEFVRSFLAG EEECCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNTRRFPTVWDAIRRPPARAMICRLRRIHHEPDSRRSPLLLLHGFPDSEHMYDDYVTPKE CCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHH RRQDWLRGRSIYAIALPNRRTNPNWPSLSDLWQRRLEREVAALIDIVIAASPTGNVVIIA HHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE HDWGATFVWARVRQRPDLPIERMVALSVGSSFRYDFGEHGIGALGWLYGMLFGLPYYLPP ECCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCH ARFFVAAMLMLSGYRAPDAHNAAYDSFHYWDWPLTLLRLPLRLAGYCQQPPFTDIRFPVL HHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEE FIRCPLDRIATTARFEQTLRQRADCIVHMTANPHWFPEQRSAEVLEFVRSFLAG EEECCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA