Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222524890

Identifier: 222524890

GI number: 222524890

Start: 2052105

End: 2052476

Strand: Direct

Name: 222524890

Synonym: Chy400_1621

Alternate gene names: NA

Gene position: 2052105-2052476 (Clockwise)

Preceding gene: 222524885

Following gene: 222524891

Centisome position: 38.95

GC content: 65.05

Gene sequence:

>372_bases
ATGAGCAGACATGATCTCACCGACGACCAATGGGTGGTGATCGAACCGCTCATCCCCAAGCAACCACGTGCGCGGGGTCG
TCCGCGCAACGACGACCGCCGGACCCTGAATGGTATGTTGTATGTGCTGCACACGGGCTGTGCCTGGGCAGACCTGCCAA
CGGAGGACGAATCTCCCAGCACCTGCTGGCGACGATGGCACGCGTGGTCGCAGGACGGGACGTGGGAGCGCATGTGTCGC
ACCCTCCTGAGCCGCCTCGCTGCGGACGGCACGCTGGCATGGGCACGTGCGTTACTGGACGGCAGCGTCGTTCCGGCAAC
CAAAGGGGCACTGGCGGAGGCACAACGAAGGTTGGCAACGGCGCCAAGGTGA

Upstream 100 bases:

>100_bases
AGCAGGGTTTGAACCACCGATCACCGCCAGTGTCGCAAGCCGTACCGAGGTATCACTAGAATCTATTTCAAAAAATGTCT
TCTTATGCTAAAATAGCGGT

Downstream 100 bases:

>100_bases
TGGTCGTGGTCGATGGCACTGGCGTGCCCATCGGCCTGCACGTGGCGAGCGCACACCCGCACGACCGCACCCTGGCTGAA
GCGACGGTGCGGACCATGCG

Product: transposase IS5-like protein

Products: NA

Alternate protein names: IS5 Family Transposase OrfA; Transposase And Inactivated Derivatives-Like Protein; IS4 Family Transposase; Transposase Protein

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSRHDLTDDQWVVIEPLIPKQPRARGRPRNDDRRTLNGMLYVLHTGCAWADLPTEDESPSTCWRRWHAWSQDGTWERMCR
TLLSRLAADGTLAWARALLDGSVVPATKGALAEAQRRLATAPR

Sequences:

>Translated_123_residues
MSRHDLTDDQWVVIEPLIPKQPRARGRPRNDDRRTLNGMLYVLHTGCAWADLPTEDESPSTCWRRWHAWSQDGTWERMCR
TLLSRLAADGTLAWARALLDGSVVPATKGALAEAQRRLATAPR
>Mature_122_residues
SRHDLTDDQWVVIEPLIPKQPRARGRPRNDDRRTLNGMLYVLHTGCAWADLPTEDESPSTCWRRWHAWSQDGTWERMCRT
LLSRLAADGTLAWARALLDGSVVPATKGALAEAQRRLATAPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13974; Mature: 13843

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRHDLTDDQWVVIEPLIPKQPRARGRPRNDDRRTLNGMLYVLHTGCAWADLPTEDESPS
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCHH
TCWRRWHAWSQDGTWERMCRTLLSRLAADGTLAWARALLDGSVVPATKGALAEAQRRLAT
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
APR
CCC
>Mature Secondary Structure 
SRHDLTDDQWVVIEPLIPKQPRARGRPRNDDRRTLNGMLYVLHTGCAWADLPTEDESPS
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCHH
TCWRRWHAWSQDGTWERMCRTLLSRLAADGTLAWARALLDGSVVPATKGALAEAQRRLAT
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
APR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA