| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524879
Identifier: 222524879
GI number: 222524879
Start: 2039533
End: 2040339
Strand: Direct
Name: 222524879
Synonym: Chy400_1606
Alternate gene names: NA
Gene position: 2039533-2040339 (Clockwise)
Preceding gene: 222524878
Following gene: 222524880
Centisome position: 38.71
GC content: 53.66
Gene sequence:
>807_bases ATGCACGTGCGGCTTGCCATTCTACTCTGCCTGATCGTTGTCCTGGCCGGCTGTGGCCGCCGTTTAAGCGTTGATACAGT ACCTACAGGTTTTCCTACTCCAACAGTGGCGCCCTTTTTTCTGGAGCGCCCGACGGCAACTCCCTTCATTCCACCACCTA CGCGCACCCCCTTCCCTACCCGACCACCGGTAACACCGGTGACGGAAGCTGGAGGTTCACAGGCGAGTGCGATCAGCAGC TTGCAGGTTCTGCCAGTGTACCGTGATGCGCTGAGCACCGGCTGGAGTATTACCAATAGTGCGTTACTGGGAAGTCTTAC CCTCACGCAGACGAATGTGGTCGCGCTTGGTCAGTATGCGATTGCGGTGACACCCAGTGAGAGTACTGGTATTCTCTTCT TCACAATTACCCCGGACAGCGGCATCGAGCTACGCCGTGATCAGGTAGCGGCTTTGCGATTGAGGCTGAGCGGTGGTGAT ACGCCAATTGCCAATGATGGGATGACGATTTCGGTGGTGGGAAGCAATCGCGTACCCTACTGGGAACCCAATGACAATTC GGTAAGTCTGGAGGGGAGAGTGACCGATAGCACAGAACCACTCTTTCCGGAGACCAGGCTCTATTTTTTGGGTTTGAATC GGGCCATTGCACCCGGTGAGTGGGCTGAGATTTATGTCTGGCTGGATGATTTGATCTATGAACCTGAATATACGTATGTC ACCGGTTTTTACCTCAAGACGAGTAGTGATCTGGTGACAAAATACTACGTCGATCAGGTTGAATGGCTGATACGTGACCA GCCATAA
Upstream 100 bases:
>100_bases TAATCGGCGAGAGCGGTATACTGCACGTGACAATGAAGATGAATTCGTGCTGGCAGGTTGCCGGTTTCGGCAGCAATGCC ACCTGGAGAGTGAGGATTGT
Downstream 100 bases:
>100_bases TCCGACAGAGCCTGTTATGAATGTTGCACTATAAACCTGATGAAACTATTGAACTACGGCAGAAGTAGGGTTCATCCATA CGTGCTGCTCGCCCTTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MHVRLAILLCLIVVLAGCGRRLSVDTVPTGFPTPTVAPFFLERPTATPFIPPPTRTPFPTRPPVTPVTEAGGSQASAISS LQVLPVYRDALSTGWSITNSALLGSLTLTQTNVVALGQYAIAVTPSESTGILFFTITPDSGIELRRDQVAALRLRLSGGD TPIANDGMTISVVGSNRVPYWEPNDNSVSLEGRVTDSTEPLFPETRLYFLGLNRAIAPGEWAEIYVWLDDLIYEPEYTYV TGFYLKTSSDLVTKYYVDQVEWLIRDQP
Sequences:
>Translated_268_residues MHVRLAILLCLIVVLAGCGRRLSVDTVPTGFPTPTVAPFFLERPTATPFIPPPTRTPFPTRPPVTPVTEAGGSQASAISS LQVLPVYRDALSTGWSITNSALLGSLTLTQTNVVALGQYAIAVTPSESTGILFFTITPDSGIELRRDQVAALRLRLSGGD TPIANDGMTISVVGSNRVPYWEPNDNSVSLEGRVTDSTEPLFPETRLYFLGLNRAIAPGEWAEIYVWLDDLIYEPEYTYV TGFYLKTSSDLVTKYYVDQVEWLIRDQP >Mature_268_residues MHVRLAILLCLIVVLAGCGRRLSVDTVPTGFPTPTVAPFFLERPTATPFIPPPTRTPFPTRPPVTPVTEAGGSQASAISS LQVLPVYRDALSTGWSITNSALLGSLTLTQTNVVALGQYAIAVTPSESTGILFFTITPDSGIELRRDQVAALRLRLSGGD TPIANDGMTISVVGSNRVPYWEPNDNSVSLEGRVTDSTEPLFPETRLYFLGLNRAIAPGEWAEIYVWLDDLIYEPEYTYV TGFYLKTSSDLVTKYYVDQVEWLIRDQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29327; Mature: 29327
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVRLAILLCLIVVLAGCGRRLSVDTVPTGFPTPTVAPFFLERPTATPFIPPPTRTPFPT CCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCC RPPVTPVTEAGGSQASAISSLQVLPVYRDALSTGWSITNSALLGSLTLTQTNVVALGQYA CCCCCCCCCCCCCCHHHHHCEEEEHHHHHHHHCCCCEECCCEEEEEEEECCCEEEEEEEE IAVTPSESTGILFFTITPDSGIELRRDQVAALRLRLSGGDTPIANDGMTISVVGSNRVPY EEEECCCCCCEEEEEECCCCCCEECCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCE WEPNDNSVSLEGRVTDSTEPLFPETRLYFLGLNRAIAPGEWAEIYVWLDDLIYEPEYTYV ECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEHHHEECCCCEEE TGFYLKTSSDLVTKYYVDQVEWLIRDQP EEEEEECCCCHHHHHHHHHHHEEECCCC >Mature Secondary Structure MHVRLAILLCLIVVLAGCGRRLSVDTVPTGFPTPTVAPFFLERPTATPFIPPPTRTPFPT CCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCC RPPVTPVTEAGGSQASAISSLQVLPVYRDALSTGWSITNSALLGSLTLTQTNVVALGQYA CCCCCCCCCCCCCCHHHHHCEEEEHHHHHHHHCCCCEECCCEEEEEEEECCCEEEEEEEE IAVTPSESTGILFFTITPDSGIELRRDQVAALRLRLSGGDTPIANDGMTISVVGSNRVPY EEEECCCCCCEEEEEECCCCCCEECCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCE WEPNDNSVSLEGRVTDSTEPLFPETRLYFLGLNRAIAPGEWAEIYVWLDDLIYEPEYTYV ECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEHHHEECCCCEEE TGFYLKTSSDLVTKYYVDQVEWLIRDQP EEEEEECCCCHHHHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA