| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222524878
Identifier: 222524878
GI number: 222524878
Start: 2037891
End: 2039426
Strand: Direct
Name: 222524878
Synonym: Chy400_1605
Alternate gene names: NA
Gene position: 2037891-2039426 (Clockwise)
Preceding gene: 222524877
Following gene: 222524879
Centisome position: 38.68
GC content: 52.15
Gene sequence:
>1536_bases ATGCTTGATCTACTTGTTCCACGCTATCCCGATGTGATGACGATTGCCCGCCGCAATGAGCGGCGCTGGTGGATACTATT CCTGGTGGTTTGTGTACTCACCGGCGTGATTGTGGTGTTACTGCGTCGTCGGATGAGTCCTGAGTCAGTACTTGCTTTTC TGATCTTTGGCGGTGTCCTGATTGCCACTGCAATTCAGCCCCGTTTTGGTGTATATGCCATTTTAGGGCTGACGCTCTTT GGTGATCGCTCGCTCCACCCCTGGTACCCCTTTACGAAAAATCTGTCGAGTCCCGAGTCGATTATGTATGTCTCCGACTC GTTCTCACTTAGCCCCCAGGAGCTGGCAATCGTCTGGACACTTGTAGTCTGGCTGGTGCGAGCAGCGACAGAACGGCGCC TACGCATCCATTTTGGGCCTCTCTTTTGGCCGGCAGCGATTTTTCTGGTGTTTAACGCTATCGGATTGGTGTATGGTCTG GCCAATGGCGGGAATCGGGTGATAGCACTGTGGGAGGTTCGATCCATCTTCTATCTTCCCCTGATGTTGTTGCTGGCCGG TAATTTAATTGAAACCCGTGCTCACTTGAATACCCTGTTCTGGGTGGCGACAATTGCTCTGTTTGCGAAGGGGGTCGCCG GCGTCTGGTACGTCCACGATGTGTTGAAGTGGGATCTGGCAGGGGTGGAACGTATCGCCGAACATGCCATGTCGATCCAT TTCAACTTCTTCTTCGTGCTGTTGGTTGCAGCATGGCTCTATCGCGATAGCGCGACCCGTCGTTTCTCGATGACTTTAAT GGCACCGTTTGTGCTCTTCAGCCTGGTTGCCAACTTTCGCCGGGCCGGATTTCTCACCCTTGGCATGGCGCTCGGTCTGA TAGTGCTGCTCCTCTACATCGAGAACCGACGCCTCTTCTTCATCATTGCCCCAACCGGTGCGGTGAGTTTGCTGGCGTAC CTGATCGTTTTCTGGAATAATCAAGGGCCAATCGGCATTCTGGCCCGGGCTGTTCGCTCGGTTATTGGCCAACCCAGTGC CCGCGATGCGGCATCGAATGTGTACCGTGATTTAGAGAATATCAACATTATGTTTAATATTCGCATGTCGCCACTCACGG GTATTGGATTTGGTAATAAATTTCACATGATCGTCCCCCTCCCCGATATTAGTGTCTTCGAGTGGTGGGAATATATCACC CATAACTCAATTATGTGGGTCTGGATGAAGATTGGGGTGATTGGGTTTTACGGCCTCATCCTTCTATTAGCATTGACGAT GCTCTACGGTGCCCGCATGGTGCGCCTGATGCCATACGGTCAATTGCGCGTCTTTGCTCTGACGGCCACCCTCTACATCT TTACCCACTTTGTCTACGCCTATGTCGATATGTCCTGGGAAAACGGTAGTATGGTCTTTGTAGGCACGATGATGGGAGTG ATTAACGCCTTGCCACAAATTGCCACAGAGAAACCTCTCCCGGTTCGCCCCTGGCGAGTGTTTTCATCCCAACCGGTAAC GAATAATACCGCCTGA
Upstream 100 bases:
>100_bases GTGCTTGTGATGATGGGACTGAGCGCAGTAGTGGTTGCTGCCTACTACTTTCTCAACCTGATTTGACCGGTGAGCAATCT GCGTATCCGGTGAATACTTT
Downstream 100 bases:
>100_bases TGCCGATAATCGGCGAGAGCGGTATACTGCACGTGACAATGAAGATGAATTCGTGCTGGCAGGTTGCCGGTTTCGGCAGC AATGCCACCTGGAGAGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MLDLLVPRYPDVMTIARRNERRWWILFLVVCVLTGVIVVLLRRRMSPESVLAFLIFGGVLIATAIQPRFGVYAILGLTLF GDRSLHPWYPFTKNLSSPESIMYVSDSFSLSPQELAIVWTLVVWLVRAATERRLRIHFGPLFWPAAIFLVFNAIGLVYGL ANGGNRVIALWEVRSIFYLPLMLLLAGNLIETRAHLNTLFWVATIALFAKGVAGVWYVHDVLKWDLAGVERIAEHAMSIH FNFFFVLLVAAWLYRDSATRRFSMTLMAPFVLFSLVANFRRAGFLTLGMALGLIVLLLYIENRRLFFIIAPTGAVSLLAY LIVFWNNQGPIGILARAVRSVIGQPSARDAASNVYRDLENINIMFNIRMSPLTGIGFGNKFHMIVPLPDISVFEWWEYIT HNSIMWVWMKIGVIGFYGLILLLALTMLYGARMVRLMPYGQLRVFALTATLYIFTHFVYAYVDMSWENGSMVFVGTMMGV INALPQIATEKPLPVRPWRVFSSQPVTNNTA
Sequences:
>Translated_511_residues MLDLLVPRYPDVMTIARRNERRWWILFLVVCVLTGVIVVLLRRRMSPESVLAFLIFGGVLIATAIQPRFGVYAILGLTLF GDRSLHPWYPFTKNLSSPESIMYVSDSFSLSPQELAIVWTLVVWLVRAATERRLRIHFGPLFWPAAIFLVFNAIGLVYGL ANGGNRVIALWEVRSIFYLPLMLLLAGNLIETRAHLNTLFWVATIALFAKGVAGVWYVHDVLKWDLAGVERIAEHAMSIH FNFFFVLLVAAWLYRDSATRRFSMTLMAPFVLFSLVANFRRAGFLTLGMALGLIVLLLYIENRRLFFIIAPTGAVSLLAY LIVFWNNQGPIGILARAVRSVIGQPSARDAASNVYRDLENINIMFNIRMSPLTGIGFGNKFHMIVPLPDISVFEWWEYIT HNSIMWVWMKIGVIGFYGLILLLALTMLYGARMVRLMPYGQLRVFALTATLYIFTHFVYAYVDMSWENGSMVFVGTMMGV INALPQIATEKPLPVRPWRVFSSQPVTNNTA >Mature_511_residues MLDLLVPRYPDVMTIARRNERRWWILFLVVCVLTGVIVVLLRRRMSPESVLAFLIFGGVLIATAIQPRFGVYAILGLTLF GDRSLHPWYPFTKNLSSPESIMYVSDSFSLSPQELAIVWTLVVWLVRAATERRLRIHFGPLFWPAAIFLVFNAIGLVYGL ANGGNRVIALWEVRSIFYLPLMLLLAGNLIETRAHLNTLFWVATIALFAKGVAGVWYVHDVLKWDLAGVERIAEHAMSIH FNFFFVLLVAAWLYRDSATRRFSMTLMAPFVLFSLVANFRRAGFLTLGMALGLIVLLLYIENRRLFFIIAPTGAVSLLAY LIVFWNNQGPIGILARAVRSVIGQPSARDAASNVYRDLENINIMFNIRMSPLTGIGFGNKFHMIVPLPDISVFEWWEYIT HNSIMWVWMKIGVIGFYGLILLLALTMLYGARMVRLMPYGQLRVFALTATLYIFTHFVYAYVDMSWENGSMVFVGTMMGV INALPQIATEKPLPVRPWRVFSSQPVTNNTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58051; Mature: 58051
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLLVPRYPDVMTIARRNERRWWILFLVVCVLTGVIVVLLRRRMSPESVLAFLIFGGVL CCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IATAIQPRFGVYAILGLTLFGDRSLHPWYPFTKNLSSPESIMYVSDSFSLSPQELAIVWT HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH LVVWLVRAATERRLRIHFGPLFWPAAIFLVFNAIGLVYGLANGGNRVIALWEVRSIFYLP HHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH LMLLLAGNLIETRAHLNTLFWVATIALFAKGVAGVWYVHDVLKWDLAGVERIAEHAMSIH HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNFFFVLLVAAWLYRDSATRRFSMTLMAPFVLFSLVANFRRAGFLTLGMALGLIVLLLYI HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENRRLFFIIAPTGAVSLLAYLIVFWNNQGPIGILARAVRSVIGQPSARDAASNVYRDLEN CCCEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC INIMFNIRMSPLTGIGFGNKFHMIVPLPDISVFEWWEYITHNSIMWVWMKIGVIGFYGLI CEEEEEEEECCEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LLLALTMLYGARMVRLMPYGQLRVFALTATLYIFTHFVYAYVDMSWENGSMVFVGTMMGV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEHHHHHHH INALPQIATEKPLPVRPWRVFSSQPVTNNTA HHHHHHHHCCCCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure MLDLLVPRYPDVMTIARRNERRWWILFLVVCVLTGVIVVLLRRRMSPESVLAFLIFGGVL CCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IATAIQPRFGVYAILGLTLFGDRSLHPWYPFTKNLSSPESIMYVSDSFSLSPQELAIVWT HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH LVVWLVRAATERRLRIHFGPLFWPAAIFLVFNAIGLVYGLANGGNRVIALWEVRSIFYLP HHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH LMLLLAGNLIETRAHLNTLFWVATIALFAKGVAGVWYVHDVLKWDLAGVERIAEHAMSIH HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNFFFVLLVAAWLYRDSATRRFSMTLMAPFVLFSLVANFRRAGFLTLGMALGLIVLLLYI HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENRRLFFIIAPTGAVSLLAYLIVFWNNQGPIGILARAVRSVIGQPSARDAASNVYRDLEN CCCEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC INIMFNIRMSPLTGIGFGNKFHMIVPLPDISVFEWWEYITHNSIMWVWMKIGVIGFYGLI CEEEEEEEECCEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LLLALTMLYGARMVRLMPYGQLRVFALTATLYIFTHFVYAYVDMSWENGSMVFVGTMMGV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEHHHHHHH INALPQIATEKPLPVRPWRVFSSQPVTNNTA HHHHHHHHCCCCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA