| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222524877
Identifier: 222524877
GI number: 222524877
Start: 2037713
End: 2037856
Strand: Direct
Name: 222524877
Synonym: Chy400_1604
Alternate gene names: NA
Gene position: 2037713-2037856 (Clockwise)
Preceding gene: 222524876
Following gene: 222524878
Centisome position: 38.67
GC content: 48.61
Gene sequence:
>144_bases ATGACGTTCTTTGTAGGGTTTCTGGTATTGTGTCTGCTCATTGGTGCGCTCACTCCTAACTGGCGGATGCGTTATCTGGT GCTTGTGATGATGGGACTGAGCGCAGTAGTGGTTGCTGCCTACTACTTTCTCAACCTGATTTGA
Upstream 100 bases:
>100_bases TAAATGACATTAAACACGTACCGATTCTTGGTGTTATTCTTAACCAGGCGCAGATTGCAACCCCGCGCTGGATACATCGC CTGATCCCACAGGAGTAGGT
Downstream 100 bases:
>100_bases CCGGTGAGCAATCTGCGTATCCGGTGAATACTTTATGCTTGATCTACTTGTTCCACGCTATCCCGATGTGATGACGATTG CCCGCCGCAATGAGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MTFFVGFLVLCLLIGALTPNWRMRYLVLVMMGLSAVVVAAYYFLNLI
Sequences:
>Translated_47_residues MTFFVGFLVLCLLIGALTPNWRMRYLVLVMMGLSAVVVAAYYFLNLI >Mature_46_residues TFFVGFLVLCLLIGALTPNWRMRYLVLVMMGLSAVVVAAYYFLNLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5345; Mature: 5214
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 8.5 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFFVGFLVLCLLIGALTPNWRMRYLVLVMMGLSAVVVAAYYFLNLI CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TFFVGFLVLCLLIGALTPNWRMRYLVLVMMGLSAVVVAAYYFLNLI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA