Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222524873

Identifier: 222524873

GI number: 222524873

Start: 2033548

End: 2034792

Strand: Direct

Name: 222524873

Synonym: Chy400_1600

Alternate gene names: NA

Gene position: 2033548-2034792 (Clockwise)

Preceding gene: 222524872

Following gene: 222524875

Centisome position: 38.59

GC content: 52.85

Gene sequence:

>1245_bases
ATGCGACAACCGTTTATGGCGATCACAATCATCATATTATTGTGGGGTAATTCTATCGCTACCCAACCGGCCAGCGCCGC
AATTCACAACATCGGCTCCGGTGGTTGTCCGGTCAACACCGTAGTGGGTGGAAACAACCTGGTACAGAACGGTGATTTTG
CTCAGGGCGCGAGTGGTTTTAGCTCGGCACTCACCAATCGAGGTAATGGTGTCTACCCGGATGACACTGGCGGGGGTGGT
TTTTCGATCCAGAATGGCAGTGTTGTATATCCTCCCTTTGAGAGTAATCCTTACCTCTTTGGCCGCCCTTTCCCAGGTGA
TGTGCAACGCGACGTGCCGCCGAGTAACACCTATTTTTATTCAAACCCCAGTGCTGCAAACTACAGTGCCGGCAATGGTC
GGGTAAATCTGTGGACACAGGTAGTGAGTGTGGCGCCAAACACTACTTACAACTTCTTTGCCTACTTCGATAACCTGCTC
GATCCGGTGAAGAGTGCTAACGGTACTGCTGATCCGATTATTGAGCTGCGTGTCAATAACACCTCGGTCGGCACAACCGT
TGTACCAAAAATCCCAGATCGTTGGGTGCCGATACAATTTGCCTTCACCACCGGAACCGGTGTCACCAGCCTCACGCTCC
AGATCGATAGCCTGACCAACAACACGTTTGGCGATGATTTTGCGATGACCCAGATCAATTTGAAGCAGTGTGTGAGTGGT
GTAGGCGCTGCCAAGTACGCCTTTCCACCCCAGGTCGCGCAGCATCATGGTGAGGATGGGTATCGGTTGGAGTATCTGAT
CACAATCCGCAATTTGGGAGCTGATCCGGTCAGTAACCTGCAGGCCATAGATGATCTGGCCGCGGTTTTCGCCGATGCTG
AGGCATGGGTAGTGATGGTCCTGGAAAATGTGAACGAGAGCGGTTTTGTACCATTAACGGTGAACCCGAACTTCAATGGT
CAGACAGACAAACAACTGCTGGCACCTGGTCAGAGTCTGGCTGCCGGTCTCACTGCCCGCTTACGCCTGATCGTTTGGGT
GCAACCCCCTGAGGGGCCAGTTGTGTTCGCTAATCAGGTGCAGCTTACAGCCGTTTCGGGAAATGTGATCGTGACCGACA
CGTCTAACCCTGGCCTCGATCCCGATCCTAATGGCAACGGCGACCCAAAGGAAGTGAATGAGAGTGGCACAACGGTGACA
ATCTTTACGCCGTATCAGTACTTTTTGCCGACAGTGCTGCGCTGA

Upstream 100 bases:

>100_bases
AGCACCAACTGCCCATACTCCGGATCGTGTCTATACGTTTGCTCCATATGCGGTGACCTTCTTAACCTTTACCAGTCCAT
AATGCAGGAGGGAGGATCAT

Downstream 100 bases:

>100_bases
AAGCTGTCCTAAACCTCTGTGCCCTCTGTGTCGCTGTGGTGCAACAAGCCACTATCAAGACACGAGGGGCACAGTGGGAT
GGCGGTTAACAAGGGTGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MRQPFMAITIIILLWGNSIATQPASAAIHNIGSGGCPVNTVVGGNNLVQNGDFAQGASGFSSALTNRGNGVYPDDTGGGG
FSIQNGSVVYPPFESNPYLFGRPFPGDVQRDVPPSNTYFYSNPSAANYSAGNGRVNLWTQVVSVAPNTTYNFFAYFDNLL
DPVKSANGTADPIIELRVNNTSVGTTVVPKIPDRWVPIQFAFTTGTGVTSLTLQIDSLTNNTFGDDFAMTQINLKQCVSG
VGAAKYAFPPQVAQHHGEDGYRLEYLITIRNLGADPVSNLQAIDDLAAVFADAEAWVVMVLENVNESGFVPLTVNPNFNG
QTDKQLLAPGQSLAAGLTARLRLIVWVQPPEGPVVFANQVQLTAVSGNVIVTDTSNPGLDPDPNGNGDPKEVNESGTTVT
IFTPYQYFLPTVLR

Sequences:

>Translated_414_residues
MRQPFMAITIIILLWGNSIATQPASAAIHNIGSGGCPVNTVVGGNNLVQNGDFAQGASGFSSALTNRGNGVYPDDTGGGG
FSIQNGSVVYPPFESNPYLFGRPFPGDVQRDVPPSNTYFYSNPSAANYSAGNGRVNLWTQVVSVAPNTTYNFFAYFDNLL
DPVKSANGTADPIIELRVNNTSVGTTVVPKIPDRWVPIQFAFTTGTGVTSLTLQIDSLTNNTFGDDFAMTQINLKQCVSG
VGAAKYAFPPQVAQHHGEDGYRLEYLITIRNLGADPVSNLQAIDDLAAVFADAEAWVVMVLENVNESGFVPLTVNPNFNG
QTDKQLLAPGQSLAAGLTARLRLIVWVQPPEGPVVFANQVQLTAVSGNVIVTDTSNPGLDPDPNGNGDPKEVNESGTTVT
IFTPYQYFLPTVLR
>Mature_414_residues
MRQPFMAITIIILLWGNSIATQPASAAIHNIGSGGCPVNTVVGGNNLVQNGDFAQGASGFSSALTNRGNGVYPDDTGGGG
FSIQNGSVVYPPFESNPYLFGRPFPGDVQRDVPPSNTYFYSNPSAANYSAGNGRVNLWTQVVSVAPNTTYNFFAYFDNLL
DPVKSANGTADPIIELRVNNTSVGTTVVPKIPDRWVPIQFAFTTGTGVTSLTLQIDSLTNNTFGDDFAMTQINLKQCVSG
VGAAKYAFPPQVAQHHGEDGYRLEYLITIRNLGADPVSNLQAIDDLAAVFADAEAWVVMVLENVNESGFVPLTVNPNFNG
QTDKQLLAPGQSLAAGLTARLRLIVWVQPPEGPVVFANQVQLTAVSGNVIVTDTSNPGLDPDPNGNGDPKEVNESGTTVT
IFTPYQYFLPTVLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44069; Mature: 44069

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQPFMAITIIILLWGNSIATQPASAAIHNIGSGGCPVNTVVGGNNLVQNGDFAQGASGF
CCCCHHEEEEEEEEECCCCCCCCHHHHHHCCCCCCCCEEEEECCCCEECCCCCCCCCCHH
SSALTNRGNGVYPDDTGGGGFSIQNGSVVYPPFESNPYLFGRPFPGDVQRDVPPSNTYFY
HHHHHCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEE
SNPSAANYSAGNGRVNLWTQVVSVAPNTTYNFFAYFDNLLDPVKSANGTADPIIELRVNN
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
TSVGTTVVPKIPDRWVPIQFAFTTGTGVTSLTLQIDSLTNNTFGDDFAMTQINLKQCVSG
CCCCCEEECCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEEECHHHHHCC
VGAAKYAFPPQVAQHHGEDGYRLEYLITIRNLGADPVSNLQAIDDLAAVFADAEAWVVMV
CCCCCCCCCHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
LENVNESGFVPLTVNPNFNGQTDKQLLAPGQSLAAGLTARLRLIVWVQPPEGPVVFANQV
EECCCCCCEEEEEECCCCCCCCCHHHHCCCHHHHHCCEEEEEEEEEEECCCCCEEEECEE
QLTAVSGNVIVTDTSNPGLDPDPNGNGDPKEVNESGTTVTIFTPYQYFLPTVLR
EEEEEECCEEEECCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCHHHHHHHHCC
>Mature Secondary Structure
MRQPFMAITIIILLWGNSIATQPASAAIHNIGSGGCPVNTVVGGNNLVQNGDFAQGASGF
CCCCHHEEEEEEEEECCCCCCCCHHHHHHCCCCCCCCEEEEECCCCEECCCCCCCCCCHH
SSALTNRGNGVYPDDTGGGGFSIQNGSVVYPPFESNPYLFGRPFPGDVQRDVPPSNTYFY
HHHHHCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEE
SNPSAANYSAGNGRVNLWTQVVSVAPNTTYNFFAYFDNLLDPVKSANGTADPIIELRVNN
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
TSVGTTVVPKIPDRWVPIQFAFTTGTGVTSLTLQIDSLTNNTFGDDFAMTQINLKQCVSG
CCCCCEEECCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEEECHHHHHCC
VGAAKYAFPPQVAQHHGEDGYRLEYLITIRNLGADPVSNLQAIDDLAAVFADAEAWVVMV
CCCCCCCCCHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
LENVNESGFVPLTVNPNFNGQTDKQLLAPGQSLAAGLTARLRLIVWVQPPEGPVVFANQV
EECCCCCCEEEEEECCCCCCCCCHHHHCCCHHHHHCCEEEEEEEEEEECCCCCEEEECEE
QLTAVSGNVIVTDTSNPGLDPDPNGNGDPKEVNESGTTVTIFTPYQYFLPTVLR
EEEEEECCEEEECCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA