| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524850
Identifier: 222524850
GI number: 222524850
Start: 2008492
End: 2008935
Strand: Direct
Name: 222524850
Synonym: Chy400_1577
Alternate gene names: NA
Gene position: 2008492-2008935 (Clockwise)
Preceding gene: 222524847
Following gene: 222524857
Centisome position: 38.12
GC content: 51.58
Gene sequence:
>444_bases ATGATCAAGCCAATGGCGTCGGTTGGGGCAGAGCAGCGAATAACCATAACGAATCTCTGGCGATCAGGTCGCGCTAACCT CTTTTTTATCATGGTGGGGTTAGAGTTGTGCCTGCTACTAAGCGTACTTGTCTGGCTATTGTTATCCGCACCACCGCGCC CGTCGTTGACCACGACACCGGATTTGTCTCGGTTGACCGATGAAATTCAGGGTCGTCTTAGCGGATTGATCATCGATCCC GTCATCGAAGTCAAACCAGGAGTTTTCGTGCGCTCAAGTAATGTGCGGGGTTTCCACTACGAGGGCAACGTCTACTACTA CTATATCGAGGGTGTGCCGAATTACGATCCCTTGTCGCGTGGATTACTCCGTCCTGATCAGGTAGAAATCATGCTTCGCG ACGATAGTGGTGAGCAGACCATCGTCATCTACCGGGTGCAATAG
Upstream 100 bases:
>100_bases CATTGGTTACGGTGGTTTGTTACACTATACTCACTTAACTTCCTGGCCTGCATGACAGTCACAAGAACCGGTATCCAGTC ACGTGCACAAGGAAATCGTC
Downstream 100 bases:
>100_bases CAGGTCGGGTGAGAGCGCAGGATACGCATTTCTCCAGATCAACGACGACGCCCTTCTTCCCAGTTCCCCCAATCCCGTTC TTCGGCGGCACGGATCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MIKPMASVGAEQRITITNLWRSGRANLFFIMVGLELCLLLSVLVWLLLSAPPRPSLTTTPDLSRLTDEIQGRLSGLIIDP VIEVKPGVFVRSSNVRGFHYEGNVYYYYIEGVPNYDPLSRGLLRPDQVEIMLRDDSGEQTIVIYRVQ
Sequences:
>Translated_147_residues MIKPMASVGAEQRITITNLWRSGRANLFFIMVGLELCLLLSVLVWLLLSAPPRPSLTTTPDLSRLTDEIQGRLSGLIIDP VIEVKPGVFVRSSNVRGFHYEGNVYYYYIEGVPNYDPLSRGLLRPDQVEIMLRDDSGEQTIVIYRVQ >Mature_147_residues MIKPMASVGAEQRITITNLWRSGRANLFFIMVGLELCLLLSVLVWLLLSAPPRPSLTTTPDLSRLTDEIQGRLSGLIIDP VIEVKPGVFVRSSNVRGFHYEGNVYYYYIEGVPNYDPLSRGLLRPDQVEIMLRDDSGEQTIVIYRVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16625; Mature: 16625
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKPMASVGAEQRITITNLWRSGRANLFFIMVGLELCLLLSVLVWLLLSAPPRPSLTTTP CCCCCCCCCCCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DLSRLTDEIQGRLSGLIIDPVIEVKPGVFVRSSNVRGFHYEGNVYYYYIEGVPNYDPLSR CHHHHHHHHHHHHCCEEECCEEECCCCEEEECCCCCEEEEECCEEEEEECCCCCCCCHHH GLLRPDQVEIMLRDDSGEQTIVIYRVQ CCCCCCEEEEEEECCCCCEEEEEEEEC >Mature Secondary Structure MIKPMASVGAEQRITITNLWRSGRANLFFIMVGLELCLLLSVLVWLLLSAPPRPSLTTTP CCCCCCCCCCCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DLSRLTDEIQGRLSGLIIDPVIEVKPGVFVRSSNVRGFHYEGNVYYYYIEGVPNYDPLSR CHHHHHHHHHHHHCCEEECCEEECCCCEEEECCCCCEEEEECCEEEEEECCCCCCCCHHH GLLRPDQVEIMLRDDSGEQTIVIYRVQ CCCCCCEEEEEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA