| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is kinE [H]
Identifier: 222524838
GI number: 222524838
Start: 1989680
End: 1992070
Strand: Direct
Name: kinE [H]
Synonym: Chy400_1565
Alternate gene names: 222524838
Gene position: 1989680-1992070 (Clockwise)
Preceding gene: 222524837
Following gene: 222524841
Centisome position: 37.76
GC content: 56.29
Gene sequence:
>2391_bases ATGCACACCATTCCGTCATCCTTGCGTGGTACGCTGATCGGATTGTGGAGTGCTGCTGCGCTGGTCGGAGTCATTTCGAG TTTGCTGGCCCCGCCGGCAGCATTTGATCTGGCTGCCTGGCTGGCCACCATTCTGTTTGCCCTTGGACTTACCATCTTTG AGGCGTTGACGATTGTGCGCCAGCATGACCGCCCACTGGCCGTGACTCTGGTCTTGTTGATCAGTGCCATGATCGTTTTG CCATGGCCCCTCTTTTTGCTGGCAACTGCGATAGGGGCAGTCGCCGGCACCCTGGCGCGTCAGTCCCCATGGTGGCAGGC GCTGGCGCTGGCCTCTATTCGCTGGATCGCTCTTACCGCCGGCAGCGTGGTGCTTATGCTATTTGTGCAGCAGCATCCCT TTGGTGCTGATATTGCCTCACCTTTTGCTTTGATCGGCCTGATTGGCTGCGGCTTTGTGATCTATTCGATTGAACGGGTG GCCAGTGCCAGCCTGTCTTCTCCGGTCACTGATGAGCGTTTTCTGCTGGCATTGCGGTGGCGTATCGATGACGCTGGCTG GTATGCCCTGATCTTTGCTCCGCTGGGGGGGATGCTGGCTATTCTCTGGCAACAGGAGGTGTGGGCTTTTGCGTTGGGGA TGGCACCGCTGGCGATGGTTCAAATCAGCCTGCGTCGTCAGTACAGGTTAGAAGAGGCTTTGCGCGTTGCTGATACGCAA TTGCAAACGGCTAATGCCCGTCTCCGCACCTTGTCGCGTCAGACCGATCATTTGCATAGCCTGATTGTCGCACTCATGAC CAGCCGTGATGTGCCGACAATGCTCAATCTGTTGGGTGAACGGTTGAGTGCTCTGATGGAAGCCGATTGCGCCTGGGTTA CCCTTTACGATGACCAGGGTAACCTTCAGTTAGTCGCTTCCCACCATTTACCCGTCTCTACCGAAGGGGTCGGACCGCAA CCGGTACCGCTCCCGCAAGCCTATGAAACAGCCCTGGAACAGAAGCGGGTGACACTCTTCACCAATCAGCAAGTTCAGAT GCTGGCGCCGGTGGCTGCCTTGACCGAACGTTCAACATGGCAGGCAGTGATTATGCTTCCGCTGCTCGGCGAGCAAGCCC CACTTGGTGCCGTTTGTCTGGCATTTGAGACGGTACGGGGGCTGAAAGAGGACGAACAACGTCTACTGGCAGCGTTTGCC CGTCACGCTACTGCTGTAATCCAGAATGCCCGCCTCTTTCGTCGCTGGCAGGAATCGCAAACCGAGCTGGGGCGTTCGGC CAAACTGGCTGCGGTGGGTACATTTGCCGCCAGTATTGCCCACGAATTCAACAACCTGCTTTCGGGAATGCTGGGGTATG CACAACTCGGCCTGGCCGACGATGATGTCGAAATGAAGAACGAGGCTTTGAAGGTCGTGCTCGACACCTGTAAGCGTGGT CGCAGCATTACCGGCAGCCTGCTCACCTTTGCCCGCCGCCGCGACTCGCGTCGGGAATTGTCTGATCTGCGCGAAGTTGT TGATGGAACGCTCACTCTTATGGAGATAGAACTCCGTAAGCATAATATTCGCGTTGTCCGGCAGATCGATATGGTACCAC CGACTATCTGTGATTCTGGTCAGATTTCTCAAGTCTTTTTGAATCTGCTCACCAATGCACGTGATGCGATGAAACCGCAG GGGGGGACGCTAACCGTATCACTGACCTCGGATAACGAATGGATTACCTTGCAGGTTACTGATACCGGTTGCGGCATCCC TGAAGCGGTACGTCGCCAGATTTTCCAGCCGTTTGTGACCACCAAGAATACCACCGGTAGTCAATCGGGTACCGGTCTGG GTCTGGCCGTTTCGTATGGCATCATCAAAAACCACAACGGCCACTTTGATGTCGAGAGCGAGGTCGGGAAGGGGACGACG ATGACGATCCGTCTACCTATTGTGCAAGAAGAGGAAAGTGAAACGAGCAAGGCCCCGATCCCCTCGCTGCGCATGCTGGT GATTGATGATGATGAAGCTGCTGCCCGCACACTTACCGCCCTTTTGGAACAGGCGGGTCATCAGGTGACCTATTGCGCAC ACAGTGCAGAGGCCGTAGCCATCTATACCTCCAATCCGTTCGATATTGTTTTGACCGATGTCGTGATGCCCGAACTCGAT GGGATCAGCCTCCTCAATGTGTTACGCACCTACGATCCTACGGCGAGTATCATCTTGTTCACCGGCCAGATCGAACCCGA TCAGGTTGCGGCAATGGCGGCCAGCGGTGCGTATGCCGTGTTGCGTAAACCGTTCTCTGCCGAGGAGCTGATGACGACGG TTCAGGCAGCCTATCACGACCGCGAACGGGCCAAACGCGCATTGGCAGGCTTCGTCGAAACGGCGCGTTGA
Upstream 100 bases:
>100_bases CCATTAACTGAACAACATATACAACGAGGAGTTGCCCCATCAACGTTCCGTTTTCCATCCTTGCCCGGGCAATTTCGCCA TCTGTTGAGGAGAGAATTTC
Downstream 100 bases:
>100_bases GATAAGGTGCGTGGTTGTCTTCTTTTCACTTCTGGTGCGGCAGAAATGATGACACGCCATCACTCTGGTACCGCATTTGA TCGCGGATGCGCTGAACCAA
Product: multi-sensor hybrid histidine kinase
Products: NA
Alternate protein names: Sensor histidine kinase E [H]
Number of amino acids: Translated: 796; Mature: 796
Protein sequence:
>796_residues MHTIPSSLRGTLIGLWSAAALVGVISSLLAPPAAFDLAAWLATILFALGLTIFEALTIVRQHDRPLAVTLVLLISAMIVL PWPLFLLATAIGAVAGTLARQSPWWQALALASIRWIALTAGSVVLMLFVQQHPFGADIASPFALIGLIGCGFVIYSIERV ASASLSSPVTDERFLLALRWRIDDAGWYALIFAPLGGMLAILWQQEVWAFALGMAPLAMVQISLRRQYRLEEALRVADTQ LQTANARLRTLSRQTDHLHSLIVALMTSRDVPTMLNLLGERLSALMEADCAWVTLYDDQGNLQLVASHHLPVSTEGVGPQ PVPLPQAYETALEQKRVTLFTNQQVQMLAPVAALTERSTWQAVIMLPLLGEQAPLGAVCLAFETVRGLKEDEQRLLAAFA RHATAVIQNARLFRRWQESQTELGRSAKLAAVGTFAASIAHEFNNLLSGMLGYAQLGLADDDVEMKNEALKVVLDTCKRG RSITGSLLTFARRRDSRRELSDLREVVDGTLTLMEIELRKHNIRVVRQIDMVPPTICDSGQISQVFLNLLTNARDAMKPQ GGTLTVSLTSDNEWITLQVTDTGCGIPEAVRRQIFQPFVTTKNTTGSQSGTGLGLAVSYGIIKNHNGHFDVESEVGKGTT MTIRLPIVQEEESETSKAPIPSLRMLVIDDDEAAARTLTALLEQAGHQVTYCAHSAEAVAIYTSNPFDIVLTDVVMPELD GISLLNVLRTYDPTASIILFTGQIEPDQVAAMAASGAYAVLRKPFSAEELMTTVQAAYHDRERAKRALAGFVETAR
Sequences:
>Translated_796_residues MHTIPSSLRGTLIGLWSAAALVGVISSLLAPPAAFDLAAWLATILFALGLTIFEALTIVRQHDRPLAVTLVLLISAMIVL PWPLFLLATAIGAVAGTLARQSPWWQALALASIRWIALTAGSVVLMLFVQQHPFGADIASPFALIGLIGCGFVIYSIERV ASASLSSPVTDERFLLALRWRIDDAGWYALIFAPLGGMLAILWQQEVWAFALGMAPLAMVQISLRRQYRLEEALRVADTQ LQTANARLRTLSRQTDHLHSLIVALMTSRDVPTMLNLLGERLSALMEADCAWVTLYDDQGNLQLVASHHLPVSTEGVGPQ PVPLPQAYETALEQKRVTLFTNQQVQMLAPVAALTERSTWQAVIMLPLLGEQAPLGAVCLAFETVRGLKEDEQRLLAAFA RHATAVIQNARLFRRWQESQTELGRSAKLAAVGTFAASIAHEFNNLLSGMLGYAQLGLADDDVEMKNEALKVVLDTCKRG RSITGSLLTFARRRDSRRELSDLREVVDGTLTLMEIELRKHNIRVVRQIDMVPPTICDSGQISQVFLNLLTNARDAMKPQ GGTLTVSLTSDNEWITLQVTDTGCGIPEAVRRQIFQPFVTTKNTTGSQSGTGLGLAVSYGIIKNHNGHFDVESEVGKGTT MTIRLPIVQEEESETSKAPIPSLRMLVIDDDEAAARTLTALLEQAGHQVTYCAHSAEAVAIYTSNPFDIVLTDVVMPELD GISLLNVLRTYDPTASIILFTGQIEPDQVAAMAASGAYAVLRKPFSAEELMTTVQAAYHDRERAKRALAGFVETAR >Mature_796_residues MHTIPSSLRGTLIGLWSAAALVGVISSLLAPPAAFDLAAWLATILFALGLTIFEALTIVRQHDRPLAVTLVLLISAMIVL PWPLFLLATAIGAVAGTLARQSPWWQALALASIRWIALTAGSVVLMLFVQQHPFGADIASPFALIGLIGCGFVIYSIERV ASASLSSPVTDERFLLALRWRIDDAGWYALIFAPLGGMLAILWQQEVWAFALGMAPLAMVQISLRRQYRLEEALRVADTQ LQTANARLRTLSRQTDHLHSLIVALMTSRDVPTMLNLLGERLSALMEADCAWVTLYDDQGNLQLVASHHLPVSTEGVGPQ PVPLPQAYETALEQKRVTLFTNQQVQMLAPVAALTERSTWQAVIMLPLLGEQAPLGAVCLAFETVRGLKEDEQRLLAAFA RHATAVIQNARLFRRWQESQTELGRSAKLAAVGTFAASIAHEFNNLLSGMLGYAQLGLADDDVEMKNEALKVVLDTCKRG RSITGSLLTFARRRDSRRELSDLREVVDGTLTLMEIELRKHNIRVVRQIDMVPPTICDSGQISQVFLNLLTNARDAMKPQ GGTLTVSLTSDNEWITLQVTDTGCGIPEAVRRQIFQPFVTTKNTTGSQSGTGLGLAVSYGIIKNHNGHFDVESEVGKGTT MTIRLPIVQEEESETSKAPIPSLRMLVIDDDEAAARTLTALLEQAGHQVTYCAHSAEAVAIYTSNPFDIVLTDVVMPELD GISLLNVLRTYDPTASIILFTGQIEPDQVAAMAASGAYAVLRKPFSAEELMTTVQAAYHDRERAKRALAGFVETAR
Specific function: Phosphorylates the sporulation-regulatory protein spo0A under biofilm growth conditions. Also able to weakly phosphorylate spo0F [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 PAS (PER-ARNT-SIM) domains [H]
Homologues:
Organism=Escherichia coli, GI87081816, Length=395, Percent_Identity=28.6075949367089, Blast_Score=131, Evalue=1e-31, Organism=Escherichia coli, GI1788549, Length=232, Percent_Identity=32.7586206896552, Blast_Score=116, Evalue=6e-27, Organism=Escherichia coli, GI48994928, Length=383, Percent_Identity=27.4151436031332, Blast_Score=112, Evalue=1e-25, Organism=Escherichia coli, GI1790436, Length=242, Percent_Identity=31.404958677686, Blast_Score=105, Evalue=2e-23, Organism=Escherichia coli, GI1790300, Length=243, Percent_Identity=31.6872427983539, Blast_Score=92, Evalue=2e-19, Organism=Escherichia coli, GI1788713, Length=245, Percent_Identity=29.3877551020408, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI145693157, Length=245, Percent_Identity=26.9387755102041, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1788550, Length=115, Percent_Identity=32.1739130434783, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1789149, Length=218, Percent_Identity=23.8532110091743, Blast_Score=66, Evalue=1e-11, Organism=Escherichia coli, GI1786600, Length=225, Percent_Identity=25.7777777777778, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1786837, Length=291, Percent_Identity=24.7422680412371, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1790861, Length=220, Percent_Identity=27.2727272727273, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 86792; Mature: 86792
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTIPSSLRGTLIGLWSAAALVGVISSLLAPPAAFDLAAWLATILFALGLTIFEALTIVR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QHDRPLAVTLVLLISAMIVLPWPLFLLATAIGAVAGTLARQSPWWQALALASIRWIALTA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH GSVVLMLFVQQHPFGADIASPFALIGLIGCGFVIYSIERVASASLSSPVTDERFLLALRW HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE RIDDAGWYALIFAPLGGMLAILWQQEVWAFALGMAPLAMVQISLRRQYRLEEALRVADTQ EECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQTANARLRTLSRQTDHLHSLIVALMTSRDVPTMLNLLGERLSALMEADCAWVTLYDDQG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC NLQLVASHHLPVSTEGVGPQPVPLPQAYETALEQKRVTLFTNQQVQMLAPVAALTERSTW CEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCC QAVIMLPLLGEQAPLGAVCLAFETVRGLKEDEQRLLAAFARHATAVIQNARLFRRWQESQ EEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TELGRSAKLAAVGTFAASIAHEFNNLLSGMLGYAQLGLADDDVEMKNEALKVVLDTCKRG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC RSITGSLLTFARRRDSRRELSDLREVVDGTLTLMEIELRKHNIRVVRQIDMVPPTICDSG CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEHHCCCEEEEEECCCCCCCCCCC QISQVFLNLLTNARDAMKPQGGTLTVSLTSDNEWITLQVTDTGCGIPEAVRRQIFQPFVT CHHHHHHHHHHCHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHC TKNTTGSQSGTGLGLAVSYGIIKNHNGHFDVESEVGKGTTMTIRLPIVQEEESETSKAPI CCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCC PSLRMLVIDDDEAAARTLTALLEQAGHQVTYCAHSAEAVAIYTSNPFDIVLTDVVMPELD CCEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCEEEEHHHHHCCCC GISLLNVLRTYDPTASIILFTGQIEPDQVAAMAASGAYAVLRKPFSAEELMTTVQAAYHD CHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHH RERAKRALAGFVETAR HHHHHHHHHHHHHHCC >Mature Secondary Structure MHTIPSSLRGTLIGLWSAAALVGVISSLLAPPAAFDLAAWLATILFALGLTIFEALTIVR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QHDRPLAVTLVLLISAMIVLPWPLFLLATAIGAVAGTLARQSPWWQALALASIRWIALTA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH GSVVLMLFVQQHPFGADIASPFALIGLIGCGFVIYSIERVASASLSSPVTDERFLLALRW HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE RIDDAGWYALIFAPLGGMLAILWQQEVWAFALGMAPLAMVQISLRRQYRLEEALRVADTQ EECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQTANARLRTLSRQTDHLHSLIVALMTSRDVPTMLNLLGERLSALMEADCAWVTLYDDQG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC NLQLVASHHLPVSTEGVGPQPVPLPQAYETALEQKRVTLFTNQQVQMLAPVAALTERSTW CEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCC QAVIMLPLLGEQAPLGAVCLAFETVRGLKEDEQRLLAAFARHATAVIQNARLFRRWQESQ EEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TELGRSAKLAAVGTFAASIAHEFNNLLSGMLGYAQLGLADDDVEMKNEALKVVLDTCKRG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC RSITGSLLTFARRRDSRRELSDLREVVDGTLTLMEIELRKHNIRVVRQIDMVPPTICDSG CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEHHCCCEEEEEECCCCCCCCCCC QISQVFLNLLTNARDAMKPQGGTLTVSLTSDNEWITLQVTDTGCGIPEAVRRQIFQPFVT CHHHHHHHHHHCHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHC TKNTTGSQSGTGLGLAVSYGIIKNHNGHFDVESEVGKGTTMTIRLPIVQEEESETSKAPI CCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCC PSLRMLVIDDDEAAARTLTALLEQAGHQVTYCAHSAEAVAIYTSNPFDIVLTDVVMPELD CCEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCEEEEHHHHHCCCC GISLLNVLRTYDPTASIILFTGQIEPDQVAAMAASGAYAVLRKPFSAEELMTTVQAAYHD CHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHH RERAKRALAGFVETAR HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]