| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524833
Identifier: 222524833
GI number: 222524833
Start: 1982224
End: 1983414
Strand: Reverse
Name: 222524833
Synonym: Chy400_1560
Alternate gene names: NA
Gene position: 1983414-1982224 (Counterclockwise)
Preceding gene: 222524839
Following gene: 222524832
Centisome position: 37.64
GC content: 59.78
Gene sequence:
>1191_bases ATGGATCAAGACCTTATTCGCTGGCTCAGCTCGCCAGAAGGAAGCGCCGTACTGGCCGATCTGGCGATACGTGACATACG TGAGGCGACCATCCTGAGTGAACTCAATCGGCTGCGGCGTTCACTGCCGGCGGCGCGAGCACGAGCTGCTATTGAGCAGG CATTGCTACGGCGACGGGCAATCAGCAAATTCCCCCAGGCAGACCGGATGCTCTTTACGCGCGAGGCACTGGCACAGGCG TCAGCAGCGCCTGTGGCCGCACATCGTGCCCGGCGGCTGGCCCAGGCCGGCAATGTAGCCGATCTCGGTTGCGGGATTGG CGGTGACACCATTGCACTGGCCGATGCCGGAGCGCAGGTGATCGCCGTCGAGCGCGATCCAATCAGGTTGGCGCTGGCGC GATTCAACGTTGAAGTGCTTGGGCTTGGTTCGCGAGTATCCTTTCTTGAGCGTGATTTGCTGCGCGAGCCGCTACCGTTA GCGGCAGCACTCTTCTGCGACCCGGCCCGGCGGAGTGGAGAGCGACGCCTGTTCGATCCTGATGATTTTCAGCCACCGCT CAGCCATGTACTGAGCTGGCGGCAACACACACCGGCTTTGGCGGTGAAATTAGCGCCGGGCATTCAACGTAGCGTCGTGC CGGAGGATGCAGAAGTAGAATTCGTGTCGCTTGATGGCGACCTGAAAGAGGCTGTTATCTGGTGTGGGCCATGTGCTACC ACCAGTCGGCGGGCAACGGTGCTGGGTAGCGACGGGTCAATGTCAACCATGATCGCTGATGCAACGACAGCGCCATCATT AAGCCCACCATTAGCCGTGCTCTACGAACCAGACCCGGCTGTGATCCGGGCAGGATTGGTGGCTGAACTGGCACATCAAC TCGGTGCGTATCAACTGGCACCCGATATTGCCTATCTCACCGCTCATACCGCCTTGCCAACCCCTTTTGCCCGCGCCTGG CCTATTATCACCTGGATACCGTTCCAACTCAAACGCCTGCGCGCATTAGTCCGAGAGCTTGATGCCGGTGTTGTTACTGT GAAGAAGCGCGGATCGCCACTCGACACCGATAGCCTGGCCCGTCAGCTCAGTGGTTCGGGGCAACGACACCTGGTGGTTG TCCTCACCCAAATGCCCGATGGGCCAATCGCGATTATCTGTAGCGCAGATCGTGCAGATATGGTAACGTAG
Upstream 100 bases:
>100_bases TCCCGAACAGAATCTGATGAAGACACTTTATTGTACCGCGCTTCAGTTCACTTTAGAGTATAGTATTTTGTAATTGTTGG CGACAGGTTGTTAAGCGTTT
Downstream 100 bases:
>100_bases GAACAGAATTGTTTGACTCATCAGAAAGTTAACCGATATGAACCTCTCGCGCTCAACTCGCTATCGGGGATTGATCATCC TGATCGTCATCAACTTTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MDQDLIRWLSSPEGSAVLADLAIRDIREATILSELNRLRRSLPAARARAAIEQALLRRRAISKFPQADRMLFTREALAQA SAAPVAAHRARRLAQAGNVADLGCGIGGDTIALADAGAQVIAVERDPIRLALARFNVEVLGLGSRVSFLERDLLREPLPL AAALFCDPARRSGERRLFDPDDFQPPLSHVLSWRQHTPALAVKLAPGIQRSVVPEDAEVEFVSLDGDLKEAVIWCGPCAT TSRRATVLGSDGSMSTMIADATTAPSLSPPLAVLYEPDPAVIRAGLVAELAHQLGAYQLAPDIAYLTAHTALPTPFARAW PIITWIPFQLKRLRALVRELDAGVVTVKKRGSPLDTDSLARQLSGSGQRHLVVVLTQMPDGPIAIICSADRADMVT
Sequences:
>Translated_396_residues MDQDLIRWLSSPEGSAVLADLAIRDIREATILSELNRLRRSLPAARARAAIEQALLRRRAISKFPQADRMLFTREALAQA SAAPVAAHRARRLAQAGNVADLGCGIGGDTIALADAGAQVIAVERDPIRLALARFNVEVLGLGSRVSFLERDLLREPLPL AAALFCDPARRSGERRLFDPDDFQPPLSHVLSWRQHTPALAVKLAPGIQRSVVPEDAEVEFVSLDGDLKEAVIWCGPCAT TSRRATVLGSDGSMSTMIADATTAPSLSPPLAVLYEPDPAVIRAGLVAELAHQLGAYQLAPDIAYLTAHTALPTPFARAW PIITWIPFQLKRLRALVRELDAGVVTVKKRGSPLDTDSLARQLSGSGQRHLVVVLTQMPDGPIAIICSADRADMVT >Mature_396_residues MDQDLIRWLSSPEGSAVLADLAIRDIREATILSELNRLRRSLPAARARAAIEQALLRRRAISKFPQADRMLFTREALAQA SAAPVAAHRARRLAQAGNVADLGCGIGGDTIALADAGAQVIAVERDPIRLALARFNVEVLGLGSRVSFLERDLLREPLPL AAALFCDPARRSGERRLFDPDDFQPPLSHVLSWRQHTPALAVKLAPGIQRSVVPEDAEVEFVSLDGDLKEAVIWCGPCAT TSRRATVLGSDGSMSTMIADATTAPSLSPPLAVLYEPDPAVIRAGLVAELAHQLGAYQLAPDIAYLTAHTALPTPFARAW PIITWIPFQLKRLRALVRELDAGVVTVKKRGSPLDTDSLARQLSGSGQRHLVVVLTQMPDGPIAIICSADRADMVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI151301096, Length=101, Percent_Identity=37.6237623762376, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42666; Mature: 42666
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQDLIRWLSSPEGSAVLADLAIRDIREATILSELNRLRRSLPAARARAAIEQALLRRRA CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ISKFPQADRMLFTREALAQASAAPVAAHRARRLAQAGNVADLGCGIGGDTIALADAGAQV HHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEECCCCCCCEEEEECCCCEE IAVERDPIRLALARFNVEVLGLGSRVSFLERDLLREPLPLAAALFCDPARRSGERRLFDP EEEECCCCEEEHHHHCEEEEECCHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCCCCCCCC DDFQPPLSHVLSWRQHTPALAVKLAPGIQRSVVPEDAEVEFVSLDGDLKEAVIWCGPCAT CCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHEEEECCCCC TSRRATVLGSDGSMSTMIADATTAPSLSPPLAVLYEPDPAVIRAGLVAELAHQLGAYQLA CCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHC PDIAYLTAHTALPTPFARAWPIITWIPFQLKRLRALVRELDAGVVTVKKRGSPLDTDSLA CCHHEEEECCCCCCCHHHHCCEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH RQLSGSGQRHLVVVLTQMPDGPIAIICSADRADMVT HHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCC >Mature Secondary Structure MDQDLIRWLSSPEGSAVLADLAIRDIREATILSELNRLRRSLPAARARAAIEQALLRRRA CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ISKFPQADRMLFTREALAQASAAPVAAHRARRLAQAGNVADLGCGIGGDTIALADAGAQV HHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEECCCCCCCEEEEECCCCEE IAVERDPIRLALARFNVEVLGLGSRVSFLERDLLREPLPLAAALFCDPARRSGERRLFDP EEEECCCCEEEHHHHCEEEEECCHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCCCCCCCC DDFQPPLSHVLSWRQHTPALAVKLAPGIQRSVVPEDAEVEFVSLDGDLKEAVIWCGPCAT CCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHEEEECCCCC TSRRATVLGSDGSMSTMIADATTAPSLSPPLAVLYEPDPAVIRAGLVAELAHQLGAYQLA CCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHC PDIAYLTAHTALPTPFARAWPIITWIPFQLKRLRALVRELDAGVVTVKKRGSPLDTDSLA CCHHEEEECCCCCCCHHHHCCEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH RQLSGSGQRHLVVVLTQMPDGPIAIICSADRADMVT HHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA