| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is mdtH [H]
Identifier: 222524832
GI number: 222524832
Start: 1980972
End: 1982186
Strand: Reverse
Name: mdtH [H]
Synonym: Chy400_1559
Alternate gene names: 222524832
Gene position: 1982186-1980972 (Counterclockwise)
Preceding gene: 222524833
Following gene: 222524831
Centisome position: 37.62
GC content: 58.44
Gene sequence:
>1215_bases ATGAACCTCTCGCGCTCAACTCGCTATCGGGGATTGATCATCCTGATCGTCATCAACTTTATGATGTATGCCGGCTTCTT CATGGTCATTCCCCTGGTCTCGGTACATTATGTGCAAACAATGGGTTTTGCTGCGGTGACGGTCGGGCTGGCGCTGGCAC TTCGTCAACTCGTCCAGCAGGGGGTCAGCGTAGGCGGTGGGGTACTGTCGGATCGATTTGGCGGGCGCGGCCTGATCACC GCCGGCGTCCTGGTGCGGGCCGTCGGCTTCGCCAGCCTGGCCTTTGCCGACACACCGCTCCTGCTCTTCGGATCAATGTT GCTCTCGGCGCTCGGCGGTGCGCTCTTCGAGGCACCCAGTCGCGCCGGGATCGCTGCGCTAACCACGGAAGAAGAGCGGG CGCGGGCTTTTTCCATCAACGGCGTCGGTGGTGGGCTGGGCATGGTGATTGGCCCGTTTCTCGGTGCACTGCTGCTCGAC TACGGTTTCAGTACCGTCGCGTTGGCTGCTGCCGCCTGTTTTGCCTTCATTGGCGCGATTACACTGTTCCTGCCACCGAT TGAAACGGCGACCGACCGTAGTCGGCTCGGTTTTGGGCTTGGGCTGGCACTGCGTGATCGGCCATTCCTTGCTTTCACTG CCCTTCTCATGGGGTACTGGTTTATGTGGGTACAGTTGACGATTAGTTTGCCACTGGTAGGTGAACGACTGGCCAATGCT GCCGATGCTGTGCGCTGGATTTACGGCATTAATGCAGGAATGACCGTCATCTTACAAATACCGGTCATTAGCTTATTCGA GCGCTGGCTGCGTCCGCTTAGCATCTTAATCCTCGGCATTGCTCTGATGGCGTTTGGCCTGGGGATGGTTGCGCTGGCCG GCTCCTTTCCACTCCTCATCGGATGTGTCATCATCTTCACCTTTGGCACTCTCCTCGCCACACCGGCGCAGCAGAGCGTG GCAGCGGCGTTGGCCGACAAACGAGCACTCGGTTCATACTTCGGAGTCAATGCACTTGCGCTAGCGGTAGGTGGTGGACT GGGCAATCTGAGCGGTGGCATGTTGATCGATCTGGCCGCTGCATTCAATCTGCCCGCATTGCCATGGCTGGCGTTTGCCG GGATTGGGTTCATCAGCGCCGTTGGGCTTACAATACTCGGCAACTACTTGCAATTGCGCAGTGCAACAGCGCAACTGGTT GGCATGCATCGCTAA
Upstream 100 bases:
>100_bases CAAATGCCCGATGGGCCAATCGCGATTATCTGTAGCGCAGATCGTGCAGATATGGTAACGTAGGAACAGAATTGTTTGAC TCATCAGAAAGTTAACCGAT
Downstream 100 bases:
>100_bases CGTTAGGCGCCACAACCGCGCAGCCAGACGGTGCATTCAGAACAGACCTACAGACCACAAGGTACAATATCCGATGTATA CATCGCGCTAACTAGAAAGG
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MNLSRSTRYRGLIILIVINFMMYAGFFMVIPLVSVHYVQTMGFAAVTVGLALALRQLVQQGVSVGGGVLSDRFGGRGLIT AGVLVRAVGFASLAFADTPLLLFGSMLLSALGGALFEAPSRAGIAALTTEEERARAFSINGVGGGLGMVIGPFLGALLLD YGFSTVALAAAACFAFIGAITLFLPPIETATDRSRLGFGLGLALRDRPFLAFTALLMGYWFMWVQLTISLPLVGERLANA ADAVRWIYGINAGMTVILQIPVISLFERWLRPLSILILGIALMAFGLGMVALAGSFPLLIGCVIIFTFGTLLATPAQQSV AAALADKRALGSYFGVNALALAVGGGLGNLSGGMLIDLAAAFNLPALPWLAFAGIGFISAVGLTILGNYLQLRSATAQLV GMHR
Sequences:
>Translated_404_residues MNLSRSTRYRGLIILIVINFMMYAGFFMVIPLVSVHYVQTMGFAAVTVGLALALRQLVQQGVSVGGGVLSDRFGGRGLIT AGVLVRAVGFASLAFADTPLLLFGSMLLSALGGALFEAPSRAGIAALTTEEERARAFSINGVGGGLGMVIGPFLGALLLD YGFSTVALAAAACFAFIGAITLFLPPIETATDRSRLGFGLGLALRDRPFLAFTALLMGYWFMWVQLTISLPLVGERLANA ADAVRWIYGINAGMTVILQIPVISLFERWLRPLSILILGIALMAFGLGMVALAGSFPLLIGCVIIFTFGTLLATPAQQSV AAALADKRALGSYFGVNALALAVGGGLGNLSGGMLIDLAAAFNLPALPWLAFAGIGFISAVGLTILGNYLQLRSATAQLV GMHR >Mature_404_residues MNLSRSTRYRGLIILIVINFMMYAGFFMVIPLVSVHYVQTMGFAAVTVGLALALRQLVQQGVSVGGGVLSDRFGGRGLIT AGVLVRAVGFASLAFADTPLLLFGSMLLSALGGALFEAPSRAGIAALTTEEERARAFSINGVGGGLGMVIGPFLGALLLD YGFSTVALAAAACFAFIGAITLFLPPIETATDRSRLGFGLGLALRDRPFLAFTALLMGYWFMWVQLTISLPLVGERLANA ADAVRWIYGINAGMTVILQIPVISLFERWLRPLSILILGIALMAFGLGMVALAGSFPLLIGCVIIFTFGTLLATPAQQSV AAALADKRALGSYFGVNALALAVGGGLGNLSGGMLIDLAAAFNLPALPWLAFAGIGFISAVGLTILGNYLQLRSATAQLV GMHR
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. DHA1 family. MdtH (TC 2.A.1.2.21) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081828, Length=384, Percent_Identity=36.9791666666667, Blast_Score=231, Evalue=6e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR022855 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42171; Mature: 42171
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSRSTRYRGLIILIVINFMMYAGFFMVIPLVSVHYVQTMGFAAVTVGLALALRQLVQQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVSVGGGVLSDRFGGRGLITAGVLVRAVGFASLAFADTPLLLFGSMLLSALGGALFEAPS HHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC RAGIAALTTEEERARAFSINGVGGGLGMVIGPFLGALLLDYGFSTVALAAAACFAFIGAI CCCEEEECCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH TLFLPPIETATDRSRLGFGLGLALRDRPFLAFTALLMGYWFMWVQLTISLPLVGERLANA HHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ADAVRWIYGINAGMTVILQIPVISLFERWLRPLSILILGIALMAFGLGMVALAGSFPLLI HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GCVIIFTFGTLLATPAQQSVAAALADKRALGSYFGVNALALAVGGGLGNLSGGMLIDLAA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH AFNLPALPWLAFAGIGFISAVGLTILGNYLQLRSATAQLVGMHR HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNLSRSTRYRGLIILIVINFMMYAGFFMVIPLVSVHYVQTMGFAAVTVGLALALRQLVQQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVSVGGGVLSDRFGGRGLITAGVLVRAVGFASLAFADTPLLLFGSMLLSALGGALFEAPS HHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC RAGIAALTTEEERARAFSINGVGGGLGMVIGPFLGALLLDYGFSTVALAAAACFAFIGAI CCCEEEECCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH TLFLPPIETATDRSRLGFGLGLALRDRPFLAFTALLMGYWFMWVQLTISLPLVGERLANA HHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ADAVRWIYGINAGMTVILQIPVISLFERWLRPLSILILGIALMAFGLGMVALAGSFPLLI HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GCVIIFTFGTLLATPAQQSVAAALADKRALGSYFGVNALALAVGGGLGNLSGGMLIDLAA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH AFNLPALPWLAFAGIGFISAVGLTILGNYLQLRSATAQLVGMHR HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]