| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524787
Identifier: 222524787
GI number: 222524787
Start: 1925125
End: 1925967
Strand: Reverse
Name: 222524787
Synonym: Chy400_1514
Alternate gene names: NA
Gene position: 1925967-1925125 (Counterclockwise)
Preceding gene: 222524788
Following gene: 222524786
Centisome position: 36.55
GC content: 53.26
Gene sequence:
>843_bases ATGAAGGTTCGTTTCTGGGGAGTACGGGGGTATGTACCGACACCGAATGCAGCGATGTTGCGCTATGGCGGTAATACCTG TTGTACCTCAGTTACCGGTGAACACGGTGAACTCATTGTGCTTGATACTGGAACTGGCTTCTGCATGCTGGGTGATGAGT TGATGCAGGGTGAATTCGGTCGTGGTCGTGGCACACTGACTCTGTTGATCAGCCATACCTACTGGGATCATATCCTCGGC CTGCCTTTCCCCGGCGTTGTTCACATTCCCGGCAACCGCCTCGATATCTACGGCCCCGATAGCACTCGTGGTTCCCTGCA AATGGTCTACGATGGCATGCTCTCGCCAGTCTATTCACCTGTGTTTGGACTGGCTCATATCGGTGCTACCCATCGATTTA CCCCCATCTCAACTGAACCATTCATCGTTGGTCAACTCACTATTCGGGCAATGCCCCTATCATATCGCCCTCATTCACCA ATCTGGGCTTACCGCCTGGAAGAAGGTGGGCGGGCTTTGGTCTACATCACCGATGTCCGGTATAGTGAGCGTGGTATTCG TGAAGCCGCGATTGCCTTTGCCAAACAAGCCAATGTCCTTATTCACAGTGCTCCCTATTTGCGGGATGAGCAGGTAGAGG ATTACGGTCATAGCCGGGTTGAAGATGCTATTGAGATGGCCCAGGCTGCTGACGTTGAGCGCCTGTTGCTGTTTCATCAC GCCCCGATGCGCACCGATGATGAACTTGATGCGATTGTTGCTCACTTCCGGCAGATGTTAGCTGCGCAAGGTAGCCCGCT GCAATTGATCGCTGCTGCAGAAGGGATGGAACTGGTAGTGTGA
Upstream 100 bases:
>100_bases ATGCTGAGTTGGATCAGATCGTTGCCGAGCAGCAGGCAGCCGCAGTACCTGGATTGATCATTTCTGCCGCGTTTGAGGGT ATGGAGTTAGCGAGGAAGCC
Downstream 100 bases:
>100_bases GTAAATATATCGCATGGTAAACAGTTTCTCACTGTTCGTGTCTTGCGTGACGGCTAGTGGCGTAGTAGAATACGAGAAAG GTTGCGACGTTGGAGCTACA
Product: metal-dependent hydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metal-Dependent Hydrolase; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Hydrolase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Metal Dependant Beta Lactamase Protein; Metallo-Beta-Lactamase Superfamily; Phytochrome Sensor Protein; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily I; GAF Domain/HD Domain Protein; Beta-Lactamase Family Hydrolase; Conserved Beta-Lactamase Domain Protein
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKVRFWGVRGYVPTPNAAMLRYGGNTCCTSVTGEHGELIVLDTGTGFCMLGDELMQGEFGRGRGTLTLLISHTYWDHILG LPFPGVVHIPGNRLDIYGPDSTRGSLQMVYDGMLSPVYSPVFGLAHIGATHRFTPISTEPFIVGQLTIRAMPLSYRPHSP IWAYRLEEGGRALVYITDVRYSERGIREAAIAFAKQANVLIHSAPYLRDEQVEDYGHSRVEDAIEMAQAADVERLLLFHH APMRTDDELDAIVAHFRQMLAAQGSPLQLIAAAEGMELVV
Sequences:
>Translated_280_residues MKVRFWGVRGYVPTPNAAMLRYGGNTCCTSVTGEHGELIVLDTGTGFCMLGDELMQGEFGRGRGTLTLLISHTYWDHILG LPFPGVVHIPGNRLDIYGPDSTRGSLQMVYDGMLSPVYSPVFGLAHIGATHRFTPISTEPFIVGQLTIRAMPLSYRPHSP IWAYRLEEGGRALVYITDVRYSERGIREAAIAFAKQANVLIHSAPYLRDEQVEDYGHSRVEDAIEMAQAADVERLLLFHH APMRTDDELDAIVAHFRQMLAAQGSPLQLIAAAEGMELVV >Mature_280_residues MKVRFWGVRGYVPTPNAAMLRYGGNTCCTSVTGEHGELIVLDTGTGFCMLGDELMQGEFGRGRGTLTLLISHTYWDHILG LPFPGVVHIPGNRLDIYGPDSTRGSLQMVYDGMLSPVYSPVFGLAHIGATHRFTPISTEPFIVGQLTIRAMPLSYRPHSP IWAYRLEEGGRALVYITDVRYSERGIREAAIAFAKQANVLIHSAPYLRDEQVEDYGHSRVEDAIEMAQAADVERLLLFHH APMRTDDELDAIVAHFRQMLAAQGSPLQLIAAAEGMELVV
Specific function: Unknown
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30954; Mature: 30954
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRFWGVRGYVPTPNAAMLRYGGNTCCTSVTGEHGELIVLDTGTGFCMLGDELMQGEFG CEEEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCEEEEECCCCEEEECHHHHCCCCC RGRGTLTLLISHTYWDHILGLPFPGVVHIPGNRLDIYGPDSTRGSLQMVYDGMLSPVYSP CCCCEEEEEEECHHHHHHHCCCCCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH VFGLAHIGATHRFTPISTEPFIVGQLTIRAMPLSYRPHSPIWAYRLEEGGRALVYITDVR HHHHHHCCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEECC YSERGIREAAIAFAKQANVLIHSAPYLRDEQVEDYGHSRVEDAIEMAQAADVERLLLFHH CCCCCHHHHHHHHHHHCCEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHC APMRTDDELDAIVAHFRQMLAAQGSPLQLIAAAEGMELVV CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEC >Mature Secondary Structure MKVRFWGVRGYVPTPNAAMLRYGGNTCCTSVTGEHGELIVLDTGTGFCMLGDELMQGEFG CEEEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCEEEEECCCCEEEECHHHHCCCCC RGRGTLTLLISHTYWDHILGLPFPGVVHIPGNRLDIYGPDSTRGSLQMVYDGMLSPVYSP CCCCEEEEEEECHHHHHHHCCCCCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH VFGLAHIGATHRFTPISTEPFIVGQLTIRAMPLSYRPHSPIWAYRLEEGGRALVYITDVR HHHHHHCCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEECC YSERGIREAAIAFAKQANVLIHSAPYLRDEQVEDYGHSRVEDAIEMAQAADVERLLLFHH CCCCCHHHHHHHHHHHCCEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHC APMRTDDELDAIVAHFRQMLAAQGSPLQLIAAAEGMELVV CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA