| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524788
Identifier: 222524788
GI number: 222524788
Start: 1925964
End: 1926872
Strand: Reverse
Name: 222524788
Synonym: Chy400_1515
Alternate gene names: NA
Gene position: 1926872-1925964 (Counterclockwise)
Preceding gene: 222524792
Following gene: 222524787
Centisome position: 36.57
GC content: 52.59
Gene sequence:
>909_bases ATGAGAGTTCGTATCTGGGGCACACGAGGATCATACCCTGTCGCAAACGCCAGTATGTTGCGCTATGGTGGTAATACAAC GTGTGTCGAAGTGGAAGCCGAAGACCACCATATTATTCTTAATGCTGGTACCGGTCTGCGCATGTTGGGGGAAGCTCTTC GCCAATCGCATGCTCCACCGAACCGGTTCGATCTCTTAATTACTCACACCCATTGGGATCATATCATAGGTTTTCCGTTC TTCGCCCCCCTGTTTGACCCAAATTCAAAAATTGATATCTATGGCCTGGCCCGTACTCAGTCGAGTCTGCGTACAACTCT GGCCGGTGCATTGAGCGATCCTCTGCTTCCACTCACCCTCGATGATCTACGCGCTCAGATCAACTTCTTCGAGATTGGTG CCGGTCATTGTCTTGAGTTGGGGCCGGTTCGGGTACGCACTGCTCTCGCTAATCATCCGTACCGCGCATTAGCCTATCGG TTAGAGACTGACCAGGGTGTGTTGACGTTTATTCCCGATACAGGGCCGTTTCATACGGTGCTCTTTGGCGAGCAACGCAT CGAATGGACTGGTCAGCCCACTGCTCGCAGCCAGAGCGAATTGCGTGAACTGGCGGCAATGAAAGAAGCGATTCTCGAGC TGGCATATCGTGCTGATTGGTTAATTTACGATGCGCAGTTTACCGATGCCCAATATGCCCGTTTTCCCCATTGGGGGCAC AGCAGTGCTTCTCAGGCGCGTGAAATTGCTGAAGCAGCCCAGGTGCGTCAGTTGATCCTGTTTCACCATGATCCTCACCG TACTGATGCTGAGTTGGATCAGATCGTTGCCGAGCAGCAGGCAGCCGCAGTACCTGGATTGATCATTTCTGCCGCGTTTG AGGGTATGGAGTTAGCGAGGAAGCCATGA
Upstream 100 bases:
>100_bases TGCACAAATTGCGTTTATGCTGTAAACTGTGTGTTGCAGTGCTGCATGATATTGCGCACCTGGTTGCGTTAATACGACAT AATATTGTACAGGTGCATGG
Downstream 100 bases:
>100_bases AGGTTCGTTTCTGGGGAGTACGGGGGTATGTACCGACACCGAATGCAGCGATGTTGCGCTATGGCGGTAATACCTGTTGT ACCTCAGTTACCGGTGAACA
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metal-Dependent Hydrolase; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Hydrolase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Metal Dependant Beta Lactamase Protein; Metallo-Beta-Lactamase Superfamily; Phytochrome Sensor Protein; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily I; GAF Domain/HD Domain Protein; Beta-Lactamase Family Hydrolase; Conserved Beta-Lactamase Domain Protein
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MRVRIWGTRGSYPVANASMLRYGGNTTCVEVEAEDHHIILNAGTGLRMLGEALRQSHAPPNRFDLLITHTHWDHIIGFPF FAPLFDPNSKIDIYGLARTQSSLRTTLAGALSDPLLPLTLDDLRAQINFFEIGAGHCLELGPVRVRTALANHPYRALAYR LETDQGVLTFIPDTGPFHTVLFGEQRIEWTGQPTARSQSELRELAAMKEAILELAYRADWLIYDAQFTDAQYARFPHWGH SSASQAREIAEAAQVRQLILFHHDPHRTDAELDQIVAEQQAAAVPGLIISAAFEGMELARKP
Sequences:
>Translated_302_residues MRVRIWGTRGSYPVANASMLRYGGNTTCVEVEAEDHHIILNAGTGLRMLGEALRQSHAPPNRFDLLITHTHWDHIIGFPF FAPLFDPNSKIDIYGLARTQSSLRTTLAGALSDPLLPLTLDDLRAQINFFEIGAGHCLELGPVRVRTALANHPYRALAYR LETDQGVLTFIPDTGPFHTVLFGEQRIEWTGQPTARSQSELRELAAMKEAILELAYRADWLIYDAQFTDAQYARFPHWGH SSASQAREIAEAAQVRQLILFHHDPHRTDAELDQIVAEQQAAAVPGLIISAAFEGMELARKP >Mature_302_residues MRVRIWGTRGSYPVANASMLRYGGNTTCVEVEAEDHHIILNAGTGLRMLGEALRQSHAPPNRFDLLITHTHWDHIIGFPF FAPLFDPNSKIDIYGLARTQSSLRTTLAGALSDPLLPLTLDDLRAQINFFEIGAGHCLELGPVRVRTALANHPYRALAYR LETDQGVLTFIPDTGPFHTVLFGEQRIEWTGQPTARSQSELRELAAMKEAILELAYRADWLIYDAQFTDAQYARFPHWGH SSASQAREIAEAAQVRQLILFHHDPHRTDAELDQIVAEQQAAAVPGLIISAAFEGMELARKP
Specific function: Unknown
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33724; Mature: 33724
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVRIWGTRGSYPVANASMLRYGGNTTCVEVEAEDHHIILNAGTGLRMLGEALRQSHAPP CEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCC NRFDLLITHTHWDHIIGFPFFAPLFDPNSKIDIYGLARTQSSLRTTLAGALSDPLLPLTL CCEEEEEEECCCCHHHCCCHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEH DDLRAQINFFEIGAGHCLELGPVRVRTALANHPYRALAYRLETDQGVLTFIPDTGPFHTV HHHHHEEEEEEECCCCEEECCCHHHHHHHHCCCHHHEEEEEECCCCEEEEECCCCCEEEE LFGEQRIEWTGQPTARSQSELRELAAMKEAILELAYRADWLIYDAQFTDAQYARFPHWGH EECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECEECCCHHHCCCCCCC SSASQAREIAEAAQVRQLILFHHDPHRTDAELDQIVAEQQAAAVPGLIISAAFEGMELAR CCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHC KP CC >Mature Secondary Structure MRVRIWGTRGSYPVANASMLRYGGNTTCVEVEAEDHHIILNAGTGLRMLGEALRQSHAPP CEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCC NRFDLLITHTHWDHIIGFPFFAPLFDPNSKIDIYGLARTQSSLRTTLAGALSDPLLPLTL CCEEEEEEECCCCHHHCCCHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEH DDLRAQINFFEIGAGHCLELGPVRVRTALANHPYRALAYRLETDQGVLTFIPDTGPFHTV HHHHHEEEEEEECCCCEEECCCHHHHHHHHCCCHHHEEEEEECCCCEEEEECCCCCEEEE LFGEQRIEWTGQPTARSQSELRELAAMKEAILELAYRADWLIYDAQFTDAQYARFPHWGH EECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECEECCCHHHCCCCCCC SSASQAREIAEAAQVRQLILFHHDPHRTDAELDQIVAEQQAAAVPGLIISAAFEGMELAR CCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHC KP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA